Gene
| Gene Model ID | habu1_s399842_g24620 |
|---|---|
| Locus | habu1_scaffold399842 : 1310840 ... 1316422 : + |
| To GenomeBrowser | habu1_scaffold399842:1310840..1316422 |
| Genes list of scaffold | habu1_scaffold399842 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24620.t2 | 1 | 1 | SRR1 | 100 | 155 | 2.5e-20 | 72.1 | 3.2e-24 | 4.7e-20 | 71.2 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.4 |
| Venom grand-1 | 17.0 |
| Pit, infrared sensing | 9.7 |
| Nose | 9.6 |
| Brain-1 | 5.3 |
| Eye | 9.9 |
| fetal fibroblast | 4.3 |
| venom gland-2 | 13.9 |
| Brain-2 | 4.0 |
| Spleen | 7.1 |
| Lung | 7.6 |
| Liver | 15.5 |
| Kidney | 10.3 |
| Pancreas | 13.8 |
| Small intestine | 8.1 |
| Large intestine | 8.5 |
| Stomach | 10.3 |
| heart | 6.2 |
| ovary | 6.6 |
| cheek muscle | 8.4 |
Transcript
| Transcript ID | habu1_s399842_g24620.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24620.t1 cgctggggcaggagagggaaggctgccctccatctcggccagaggctgcctcccagcccctcccgcactcactgaagccg ctttggccgtctggactggcaacagaagtgaaagtgaggctgggaatctcctcagagagcctgatggagtcaccggagcc acgatggagagcccagcccggagggacagtcacagttctggccttacctgggcatccattccacaggcagttcccgcagg gcggctgcttcgtcctccaagaggtaaacaggtaagcccgagaagccggcccgttgtagaagcggaagaggccgaccagc cgctccaggagccgcctgcagctgaggtccgagaggtcggcggtgcagcccaggacctgcaggagagaagggcgaggatg ggccggatgggacccgcaccggtcctcccccgtcagggccggaagcgaagggggatcgcgtctcccactcacccacaggg acgttcctcgcgcttccgcggcggcagcggcggcggcatgtcctgggatggaggccgcgcgggaggaggagggcggcggc ggcggcggcggcgcgggaggcagggggcggccgaggacgagagccccgcggcggcggctgagcggcagaggcggcggctg caggaggcgctctccgaattgaaggattccgacttctgggactccagccgaagaaccatcttgaagtccctcgggacccc cccggcagccgagcaggacgcctttgcagccttgggggagttgcaggaggcccttccgggaaaatcggccccggggggca gagcgaggggcctgcggtgtgtgtgctatggcctcgggaacttttgctcgtgcggcaaggcacgcctgcagctggccttc ctcttgctgctgctggaagagctcaagattcccccagagatgtgctttgtctttgaccccatcttttccaccctggaaac tgaggtgctgggcgccctcggcctcaccgtactgcagtggaatgaggaggggaagcggagcatcgagggccccacgctct tctacatgatccactgcgggaaggcgctctacaacaacctgctgtggagcaattggtctgcggaggcgctctcccagatg gtggtcgtagggaacagcttcaggggctttgaggagaggctgctggccaaagtcctccgtgagaattatagctacattgc caaggtgctggaggcatcccaagaggaagcccttccaccccacccgctccaccccgatgtcttcaacgacacatccgtcc accgctttcctctgcagaaactgaggggcctcccccaggagtgctgggcctgccagccggagcccttttacccagaagag gctcagctggaaatcatcagaaacaaaccccaataacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaaaacaatgatggtaggtcttgctccttccaggaaaccat gccaggatttctccccaaaactagaaggggaaccgggttgctgtcaaacccatagatcaactaacatcttatattgtaac cattaaaaaaatcttcttgaactctgtgccttttattaacagctgttactctcctaagtttctcaagccccttcaatgat ttgcccccactgaccggtcggcagtttgaacattttaat |
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| Transcript ID | habu1_s399842_g24620.t2 |
| Definition | - |
>habu1_s399842_g24620.t2 gaagcgaagggggatcgcgtctcccactcacccacagggacgttcctcgcgcttccgcggcggcagcggcggcggcatgt cctgggatggaggccgcgcgggaggaggagggcggcggcggcggcggcggcgcgggaggcagggggcggccgaggacgag agccccgcggcggcggctgagcggcagaggcggcggctgcaggaggcgctctccgaattgaaggattccgacttctggga ctccagccgaagaaccatcttgaagtccctcgggacccccccggcagccgagcaggacgcctttgcagccttgggggagt tgcaggaggcccttccgggaaaatcggccccggggggcagagcgaggggcctgcggtgtgtgtgctatggcctcgggaac ttttgctcgtgcggcaaggcacgcctgcagctggccttcctcttgctgctgctggaagagctcaagattcccccagagat gtgctttgtctttgaccccatcttttccaccctggaaactgaggtgctgggcgccctcggcctcaccgtactgcagtgga atgaggaggggaagcggagcatcgagggccccacgctcttctacatgatccactgcgggaaggcgctctacaacaacctg ctgtggagcaattggtctgcggaggcgctctcccagatggtggtcgtagggaacagcttcaggggctttgaggagaggct gctggccaaagtcctccgtgagaattatagctacattgccaaggtgctggaggcatcccaagaggaagcccttccacccc acccgctccaccccgatgtcttcaacgacacatccgtccaccgctttcctctgcagaaactgaggggcctcccccaggag tgctgggcctgccagccggagcccttttacccagaagaggctcagctggaaatcatcagaaacaaaccccaataacannn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnga aaacaatgatggtaggtcttgctccttccaggaaaccatgccaggatttctccccaaaactagaaggggaaccgggttgc tgtcaaacccatagatcaactaacatcttatattgtaaccattaaaaaaatcttcttgaactctgtgccttttattaaca gctgttactctcctaagtttctcaagccccttcaatgatttgcccccactgaccggtcggcagtttgaacattttaat |
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Protein
| Protein ID | habu1_s399842_g24620.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24620.t1 MESPARRDSHSSGLTWASIPQAVPAGRLLRPPRGKQVSPRSRPVVEAEEADQPLQEPPAAEVREVGGAAQDLQERRARMG RMGPAPVLPRQGRKRRGIASPTHPQGRSSRFRGGSGGGMSWDGGRAGGGGRRRRRRRGRQGAAEDESPAAAAERQRRRLQ EALSELKDSDFWDSSRRTILKSLGTPPAAEQDAFAALGELQEALPGKSAPGGRARGLRCVCYGLGNFCSCGKARLQLAFL LLLLEELKIPPEMCFVFDPIFSTLETEVLGALGLTVLQWNEEGKRSIEGPTLFYMIHCGKALYNNLLWSNWSAEALSQMV VVGNSFRGFEERLLAKVLRENYSYIAKVLEASQEEALPPHPLHPDVFNDTSVHRFPLQKLRGLPQECWACQPEPFYPEEA QLEIIRNKPQ |
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| Protein ID | habu1_s399842_g24620.t2 |
| Definition | - |
>habu1_s399842_g24620.t2 MSWDGGRAGGGGRRRRRRRGRQGAAEDESPAAAAERQRRRLQEALSELKDSDFWDSSRRTILKSLGTPPAAEQDAFAALG ELQEALPGKSAPGGRARGLRCVCYGLGNFCSCGKARLQLAFLLLLLEELKIPPEMCFVFDPIFSTLETEVLGALGLTVLQ WNEEGKRSIEGPTLFYMIHCGKALYNNLLWSNWSAEALSQMVVVGNSFRGFEERLLAKVLRENYSYIAKVLEASQEEALP PHPLHPDVFNDTSVHRFPLQKLRGLPQECWACQPEPFYPEEAQLEIIRNKPQ |
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