Gene
| Gene Model ID | habu1_s399842_g24621 |
|---|---|
| Locus | habu1_scaffold399842 : 1316428 ... 1321059 : - |
| To GenomeBrowser | habu1_scaffold399842:1316428..1321059 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tuftelin-interacting protein 11 | GO:0000390 GO:0003677 GO:0005578 GO:0006355 GO:0016607 GO:0071008 GO:0071013 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24621.t1 | 1 | 1 | G-patch | 30 | 73 | 6.2e-17 | 61.1 | 4.9e-20 | 1.2e-16 | 60.1 |
| habu1_s399842_g24621.t1 | 1 | 1 | GCFC | 276 | 544 | 0.0 | 322.9 | 0.0 | 0.0 | 320.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24621.t1 | gi|602676703|ref|XP_007443812.1| | PREDICTED: tuftelin-interacting protein 11 [Python bivittatus] | 0.0 |
| habu1_s399842_g24621.t1 | gi|558226913|ref|XP_006137534.1| | PREDICTED: tuftelin-interacting protein 11 [Pelodiscus sinensis] | 0.0 |
| habu1_s399842_g24621.t1 | gi|690427711|ref|XP_009332696.1| | PREDICTED: tuftelin-interacting protein 11 [Pygoscelis adeliae] | 0.0 |
| habu1_s399842_g24621.t1 | gi|686609002|ref|XP_009281103.1| | PREDICTED: tuftelin-interacting protein 11 [Aptenodytes forsteri] | 0.0 |
| habu1_s399842_g24621.t1 | gi|723572793|ref|XP_010306276.1| | PREDICTED: tuftelin-interacting protein 11, partial [Balearica regulorum gibbericeps] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 12.2 |
| Venom grand-1 | 18.0 |
| Pit, infrared sensing | 10.8 |
| Nose | 12.6 |
| Brain-1 | 8.6 |
| Eye | 12.5 |
| fetal fibroblast | 15.1 |
| venom gland-2 | 24.6 |
| Brain-2 | 10.5 |
| Spleen | 14.5 |
| Lung | 17.7 |
| Liver | 27.0 |
| Kidney | 25.3 |
| Pancreas | 20.5 |
| Small intestine | 23.8 |
| Large intestine | 15.4 |
| Stomach | 15.9 |
| heart | 15.2 |
| ovary | 21.6 |
| cheek muscle | 34.9 |
Transcript
| Transcript ID | habu1_s399842_g24621.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24621.t1 ccgtgctcatccttcccgtcctctcttctgaaccgatgcagggcggcaacttcaagcccagccagaagggcttcgtgggc ggcagcaagtccttcgtggactttggcagctgggagaggcacaccaagggcatcgggcagaagctcctgcagaagatggg ctacgtgcctggccgaggcctggggaagaacgcccaaggtatcatcaaccccattgaggccaagcagagaaaaggcaagg cagcgattggggcatacggctcggagcgaaccacacagtccttgcaagatttccccattgttgactctgatgaagaggag gaggaggaatttcaaaaggaactcagccagtggcggaaggaccctagcgggggcaagaaaaagcccaagtatacctacaa gacggtggaagagctgaaagccaagggcagggcgggcaagcagctgtctgcccctcagaaggagctgacacaggtcaagg tgattgacatgacgggccgggagcagaaggtttactacagctacagtcagatcagccagaagcacaacatcccagaggac ggtccacagcagcagctgcctgccttgggcaaggagaccaagacgcagagcttctccctgccggagctggagcacaacct gcagctgctgattgacctgacagagcaggagatcatccagaatgaccggcagctgcagtacgagcgggacatggtggtta acctgagccacgagatcgagaagatggagacggtgctcttgcgggaggagaccgacatccgcaacctcagcgaggtgctg gagctggtggaagagtgcgaaaggcggatgcagcccaactgcgaagaccccctgactctgcctgagtgcgtcaagatatt tgagaccctccaggataagtactatgaagagtaccagatgtcagaccgcgtggacctggccgtggccatcgtcttccctc tggtcaaggactacttcaggaactgggatcccctcaaggactgcacagccggcacggagatcctggccaaatggaaagcc ttgctggagaacgatcggttgctctcccacagcgcacaggacctcgggtcagatgcctttcacaggttgatgtgggaaac atggatgccgtacgtgcgaaacattgtggcccagtggcagccccgcaactgcatcccgattgtggacttcctcgacagct ggaggcacatcattccgatatggatcctggataacattcttgaccagctgatcttccccaaactgcagaaggaggtggag aactggaaccctctaaccgacaccgtgcccatccactcgtggatacacccctggcttcccctgatgcaggcccggctcga gccactctactcgcccatccgcaacaagctgtccaacgccctccagaagtggcatcccagcgactcctcggccaaactga ttctgcagccctggaaggaggttttcaccccgggctcgtgggaggctttcatggtcaagaacattgtgcccaaactgggc ctgtgtctcaacgagctgatcatcaacccccaccagcagcacatggacgccttcttctgggtgatggactgggaagggat gatctctgtctccagcctggtggggctcctggagaagcacttcttccccaagtggcttcaggtgctctgttcttggctca gcaacaaccccaattatgaggagatcaccaagtggtacctgggctggaagtccatgttttccgaccaggtgctggcccac ccctccatcaaggagaaattcaatgaagccctggacatcatgaacagagccgtttcctccagtgtcgggggctacatgca gcccggtgcacgggagaacatcgcttacctcacgcatacagaacgccggaaggacttccagtacgaagccatgcaggagc gccgagaagccgagaacatggcacagcgcgggattggcatggccgccagttctgtgcccatgaacttcaaggacctgatc cagaccaaagcagaggagcacaacatcgtcttcatgcctgtcatcgggaagcggcacgagggaaagcagctctacacctt tgggcgcatcgtcatctatattgaccggggggtggtctttgtgcagggtgagaagacctgggtgcccacctctctgcaga gcctcatcgacatggccaagtgagnnnnnnnnnnnnnnnngggacgggcccaaagagcttccctcatctcccctgcatcc cagaaagtgcttagggccccttgtaaaagaaaaccaggctgcaaagaggcagccctgaccaagaggcctgtatctgtaaa taaagtacctgcttcattctgatact |
|
Protein
| Protein ID | habu1_s399842_g24621.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24621.t1 MQGGNFKPSQKGFVGGSKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKAAIGAYGSERTT QSLQDFPIVDSDEEEEEEFQKELSQWRKDPSGGKKKPKYTYKTVEELKAKGRAGKQLSAPQKELTQVKVIDMTGREQKVY YSYSQISQKHNIPEDGPQQQLPALGKETKTQSFSLPELEHNLQLLIDLTEQEIIQNDRQLQYERDMVVNLSHEIEKMETV LLREETDIRNLSEVLELVEECERRMQPNCEDPLTLPECVKIFETLQDKYYEEYQMSDRVDLAVAIVFPLVKDYFRNWDPL KDCTAGTEILAKWKALLENDRLLSHSAQDLGSDAFHRLMWETWMPYVRNIVAQWQPRNCIPIVDFLDSWRHIIPIWILDN ILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQARLEPLYSPIRNKLSNALQKWHPSDSSAKLILQPWKEVFTPG SWEAFMVKNIVPKLGLCLNELIINPHQQHMDAFFWVMDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNNPNYEEITKW YLGWKSMFSDQVLAHPSIKEKFNEALDIMNRAVSSSVGGYMQPGARENIAYLTHTERRKDFQYEAMQERREAENMAQRGI GMAASSVPMNFKDLIQTKAEEHNIVFMPVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK |
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