Gene
| Gene Model ID | habu1_s399842_g24622 |
|---|---|
| Locus | habu1_scaffold399842 : 1321273 ... 1321639 : - |
| To GenomeBrowser | habu1_scaffold399842:1321273..1321639 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tuftelin-interacting protein 11 | GO:0000390 GO:0003677 GO:0005578 GO:0006355 GO:0016607 GO:0071008 GO:0071013 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24622.t1 | 1 | 1 | TIP_N | 16 | 68 | 2.4e-20 | 72.6 | 1.8e-24 | 2.6e-20 | 72.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24622.t1 | gi|71897233|ref|NP_001025836.1| | tuftelin-interacting protein 11 [Gallus gallus] | 4.0e-31 |
| habu1_s399842_g24622.t1 | gi|683918678|ref|XP_009090637.1| | PREDICTED: tuftelin-interacting protein 11 [Serinus canaria] | 6.0e-30 |
| habu1_s399842_g24622.t1 | gi|543261697|ref|XP_005421487.1| | PREDICTED: tuftelin-interacting protein 11 [Geospiza fortis] | 6.0e-30 |
| habu1_s399842_g24622.t1 | gi|542160604|ref|XP_005489007.1| | PREDICTED: tuftelin-interacting protein 11 [Zonotrichia albicollis] | 6.0e-30 |
| habu1_s399842_g24622.t1 | gi|669279771|ref|XP_008632303.1| | PREDICTED: tuftelin-interacting protein 11 [Corvus brachyrhynchos] | 6.0e-30 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 22.4 |
| Venom grand-1 | 17.7 |
| Pit, infrared sensing | 20.3 |
| Nose | 18.0 |
| Brain-1 | 18.7 |
| Eye | 15.0 |
| fetal fibroblast | 26.3 |
| venom gland-2 | 22.6 |
| Brain-2 | 17.9 |
| Spleen | 23.0 |
| Lung | 20.6 |
| Liver | 26.5 |
| Kidney | 46.7 |
| Pancreas | 17.1 |
| Small intestine | 38.1 |
| Large intestine | 21.0 |
| Stomach | 14.1 |
| heart | 19.0 |
| ovary | 37.1 |
| cheek muscle | 54.7 |
Transcript
| Transcript ID | habu1_s399842_g24622.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24622.t1 gcctctcggtcccccgcgggcgtcatgtcgctctcgcacctgtacgggcgcggcggcgaggcgggcgcggaggacgacgg cgtggagatggagaggttcgagatcagcgagtgggatctgcagaacgagttcaaccccaaccggcaccggcaccggcaga ccaaggaggaggccatctacggcctgtgggccgagcgcgactcggacgaggagaggcccagcttcggcgggaagaggtgc gcgggcggggccgggaggggggggctgggctcggagcccccgtcctaaaagccctcctgcccttccttcccnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn |
|
Protein
| Protein ID | habu1_s399842_g24622.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24622.t1 MSLSHLYGRGGEAGAEDDGVEMERFEISEWDLQNEFNPNRHRHRQTKEEAIYGLWAERDSDEERPSFGGKRCAGGAGRGG LGSEPPS |
|