Gene
| Gene Model ID | habu1_s399842_g24624 |
|---|---|
| Locus | habu1_scaffold399842 : 1341844 ... 1462009 : - |
| To GenomeBrowser | habu1_scaffold399842:1341844..1462009 |
| Genes list of scaffold | habu1_scaffold399842 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24624.t1 | gi|556959036|ref|XP_005990304.1| | PREDICTED: probable tumor suppressor protein MN1 isoform X4 [Latimeria chalumnae] | 0.0 |
| habu1_s399842_g24624.t1 | gi|556959033|ref|XP_005990303.1| | PREDICTED: probable tumor suppressor protein MN1 isoform X3 [Latimeria chalumnae] | 0.0 |
| habu1_s399842_g24624.t1 | gi|556959039|ref|XP_005990305.1| | PREDICTED: probable tumor suppressor protein MN1 isoform X5 [Latimeria chalumnae] | 0.0 |
| habu1_s399842_g24624.t1 | gi|556959030|ref|XP_005990302.1| | PREDICTED: probable tumor suppressor protein MN1 isoform X2 [Latimeria chalumnae] | 0.0 |
| habu1_s399842_g24624.t1 | gi|556959027|ref|XP_005990301.1| | PREDICTED: probable tumor suppressor protein MN1 isoform X1 [Latimeria chalumnae] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.5 |
| Venom grand-1 | 0.9 |
| Pit, infrared sensing | 2.1 |
| Nose | 0.4 |
| Brain-1 | 9.5 |
| Eye | 2.5 |
| fetal fibroblast | 3.7 |
| venom gland-2 | 0.5 |
| Brain-2 | 6.2 |
| Spleen | 0.1 |
| Lung | 2.6 |
| Liver | 0.1 |
| Kidney | 0.3 |
| Pancreas | 0.6 |
| Small intestine | 0.4 |
| Large intestine | 1.3 |
| Stomach | 1.3 |
| heart | 5.9 |
| ovary | 0.4 |
| cheek muscle | 9.2 |
Transcript
| Transcript ID | habu1_s399842_g24624.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24624.t1 gcggcggcggcgccaccttaacagggagccccgccccgccgggccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnc cgtcaccctttcacggcggaagtggcggcggcggcggcggcgaatcggcgcccgtgaatgccctgggtgagccctcttcc accctgctggccatgaacctgaccttgtccggggaaggctacggcggtttccacgccccccgcggcggccctccggagtt gggccaggcccagccgatccacggattcttcggcagcccgccgcctggcccgggcggacaccaccagacccaaccaccgc cctcgcacttcgggggtggcttcgggcccgaacccagcgcctcttgcctgcacggcgggcgcctcctcggctattcgggc ggccagcagacgttcgcggcggacggcggctacgagcagcatctggcggacggccaggcgggcggggatggcttcggaca gcagagggcgggacccctccaggacttccagccgccgccgccgccgccgcatcatcttcacaatcccggcgtgccggccc cgtgcctgccgcttgaccagtcacctaatcgcgctgcctccttccacggcctgccgggaaccgcctcctcagaaccgcac ggcctggactcgcagaggcgcctgcccggccaaggggcggccgcggtggatgccctggaatacagttacccgaacagcga gagccatttcgacttgcccgtcttctcgtcgtcagaggccgaggggcagttgccgcagtacggatccggacgacaggctg ctccgccggcaggcggcaacttccctggccactccgccgccttgccccgagcgccgggctccctggggaaggtgcctaac caacagtcccctcacggcgtcttcttcgatcggttcggcggcgctcgcaaaatgtctctggggctggagccgggcctggg cgccggaaggcaccacctagttcaacaacagccgccgcccccggctctcctggccaggcagaattcctgccccccggcgc tgccgcggccacagcagtgtccagaaggaagcgccgccaatgtgaatctgcaggacggcggcggcccgattttgcaggcg cagcacggccagttcgagtatcccatccaccggctggagaaccggggcctgcagcaccagccgcagcagcaccagccgca gcattcctacggcccgggagagccgctgttcaacgtgtcccaccatcaccaccaccacagccagccccagcagccgccca accagcgattgcaacacttcgatgcgcccccctacgcgaccctccccaagaggccccgcttcgattcgtggagcggcggt ggaggggcaggcatgcacggggcggccgccttggagagccacctgtcgccctccgcggcctatcctggtctgccggggga cttcacgccaccggtgcccgagaattttccgccgccgccgggcccggatccccaggcggctctgcagcagcgccagaacg cggcgctgatgatcaagcagatggcggccacccgcggccaacctcagcgcctccgtccgcccagcctgcagcaggtcggg catcaccaacatcctcacgctgccggcggccacggccatcaccagtccccgcaccaacaccctggcgaagccgctttcga ggcgcaggagggcgcttggttcccgccgcctcatcctccgccgggcggtggcgatttgctcttccgacccggaatcggcg ggttgcaggagccgccgccgccgccgccgccgcccctgcggatgtcctcggggggcgaaggacatgtaccctcgcccggc ggcctgcaaggccagttcggcttgagcccgccgtcggagcggaggcctagccaccccgacttcgcagtgccgacgtcgag ctttccttttggggcccccagtcgccagcccaccccgcacagcgcttcgcccgggtcatttgggcctccgacggactttc agagctctgcacctccccagtcgcagccccggccctcgccggccagcagcaagttgggggcactctcgctgggcaccttc cccaaaggcggcgtcggggcgccgcccgggagcgcaggccccaaggagagcagcggcctcttcgggcagagttgcctggc agcgctctccaccgcctgccagaacatgatcgccagcctgggtgcgcccaacctcaacgttaccttcggcaagaagggcg cgccggcggcggtgggcggcggggccggcggggagggtggcaagcggagcaagcttagccccgcagagcctcccgagaca aacggcgcagggccgcagactcccctcacggtcgcgacggctcctgcgggcgaaagcagcctctcccctaattactcccc tggatcgggccccgacgccaaagcgggaagcggacgaggcaggggacgtaggaaacgagacagcggccacgtcagcccag ccgccggggcgactggcggcgccggcggcttctttgagaagtacggctcgacggcggccgtagagagcggcagccccgga caaggcggggagcgaagcggcggcggcaccccccatcttcacgagccccccaaggcgttgagctccccgtcttctgcctg ggccaaggccggcggcgacctcctcctccagcctcctccggagcaagccgaccttcttccctccctggaccaggcggaat cctgctccccgcgcggcggcggcggcggcggcggcggcggcgacttctcctgcgaggtggaaagcgaggaggaggtgtct tccagctccgacaaccagggcaccaaagggtgtcccgccgggcgcagcccgcttcagccgcccgcccgcccggtggacca cccgctcctgaacggacagaagacgtcagccctggcgcagctgggcctgcatgccggcagcagcaccgctacctccagtc ccgacagctacggcgccgccccgcccggcccggtgcaggaggagattcacccgctggagatcctgcaagcgcagatccag ctgcagcggcagcagttcagcatctccgaggatcagccgctgggcctcaagagcgccaagcagggtcccgaaggctcggg cgggccccagaacggcgacagcggcgagctgagcagctgttgcgagggcgccggagccaagggcgcggtcagcactatcg acctggagtctctgatggccgagcactccgccgcgtggtaccttcccggagacaaagccctcctggacggggagccccgc gagaaggccctggtgtcctgggagaaagcgaaggcgcccacgcccggcaaggaagcccacgacctcccctctagcaaggc cttggctccagcacagacgggcagccacttgcagtgtctctctgtccactgcacagacgacatgggtctgcagcacctca gctccaggaagggccccgagtggcgcagcggttgccatccctcttctctggggaagccggctctgggagaggctgggtgc ttctcctccagcgaaggactcctgatcagcagcacgcttgcctggtccttctatttctttgctgatcgtctttaaccttc aatcaatccgaatagagctggaagggaccttggaggtcttctagtccaaccccctgctcaagcaggagtccccataccat ttcagacaagtggccgtccagtttttaaaaacctccagtgacgaacgtcccaaaggtgctttttcaggaggctctcctga tttcaaatgaaggcagaaatgccagcaggacacacaaatggcagaccaactccggttccttctgcagtgaggtcggcctg gcattaggtggattcctggggtcttctgcctttgccttcctcgtgtcgcgatcaagtggcagccgcgatgccgaggcgct ttgcgagaaaagtatacttgctaattcaaaacagttatgttagacgatataaatttatttagtgccataaattacataat tgaatttttatttccttcatatatttgagtgaaataactaatattttgaatttgcttggcctgcatatgtctttcacagg aacatattttctgtaatattatgcctgtataaagctgacatttaaacggtttaataaatgagctgttgtttgacttgttt |
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Protein
| Protein ID | habu1_s399842_g24624.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24624.t1 MNLTLSGEGYGGFHAPRGGPPELGQAQPIHGFFGSPPPGPGGHHQTQPPPSHFGGGFGPEPSASCLHGGRLLGYSGGQQT FAADGGYEQHLADGQAGGDGFGQQRAGPLQDFQPPPPPPHHLHNPGVPAPCLPLDQSPNRAASFHGLPGTASSEPHGLDS QRRLPGQGAAAVDALEYSYPNSESHFDLPVFSSSEAEGQLPQYGSGRQAAPPAGGNFPGHSAALPRAPGSLGKVPNQQSP HGVFFDRFGGARKMSLGLEPGLGAGRHHLVQQQPPPPALLARQNSCPPALPRPQQCPEGSAANVNLQDGGGPILQAQHGQ FEYPIHRLENRGLQHQPQQHQPQHSYGPGEPLFNVSHHHHHHSQPQQPPNQRLQHFDAPPYATLPKRPRFDSWSGGGGAG MHGAAALESHLSPSAAYPGLPGDFTPPVPENFPPPPGPDPQAALQQRQNAALMIKQMAATRGQPQRLRPPSLQQVGHHQH PHAAGGHGHHQSPHQHPGEAAFEAQEGAWFPPPHPPPGGGDLLFRPGIGGLQEPPPPPPPPLRMSSGGEGHVPSPGGLQG QFGLSPPSERRPSHPDFAVPTSSFPFGAPSRQPTPHSASPGSFGPPTDFQSSAPPQSQPRPSPASSKLGALSLGTFPKGG VGAPPGSAGPKESSGLFGQSCLAALSTACQNMIASLGAPNLNVTFGKKGAPAAVGGGAGGEGGKRSKLSPAEPPETNGAG PQTPLTVATAPAGESSLSPNYSPGSGPDAKAGSGRGRGRRKRDSGHVSPAAGATGGAGGFFEKYGSTAAVESGSPGQGGE RSGGGTPHLHEPPKALSSPSSAWAKAGGDLLLQPPPEQADLLPSLDQAESCSPRGGGGGGGGGDFSCEVESEEEVSSSSD NQGTKGCPAGRSPLQPPARPVDHPLLNGQKTSALAQLGLHAGSSTATSSPDSYGAAPPGPVQEEIHPLEILQAQIQLQRQ QFSISEDQPLGLKSAKQGPEGSGGPQNGDSGELSSCCEGAGAKGAVSTIDLESLMAEHSAAWYLPGDKALLDGEPREKAL VSWEKAKAPTPGKEAHDLPSSKALAPAQTGSHLQCLSVHCTDDMGLQHLSSRKGPEWRSGCHPSSLGKPALGEAGCFSSS EGLLISSTLAWSFYFFADRL |
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