Gene
| Gene Model ID | habu1_s399842_g24625 |
|---|---|
| Locus | habu1_scaffold399842 : 1467991 ... 1479329 : - |
| To GenomeBrowser | habu1_scaffold399842:1467991..1479329 |
| Genes list of scaffold | habu1_scaffold399842 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24625.t2 | 1 | 1 | IP_trans | 6 | 195 | 0.0 | 336.7 | 0.0 | 0.0 | 336.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24625.t2 | gi|591367218|ref|XP_007058460.1| | PREDICTED: phosphatidylinositol transfer protein beta isoform [Chelonia mydas] | 0.0 |
| habu1_s399842_g24625.t2 | gi|530617608|ref|XP_005298533.1| | PREDICTED: phosphatidylinositol transfer protein beta isoform isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s399842_g24625.t2 | gi|564263052|ref|XP_006270395.1| | PREDICTED: phosphatidylinositol transfer protein beta isoform isoform X1 [Alligator mississippiensis] | 0.0 |
| habu1_s399842_g24625.t2 | gi|723149680|ref|XP_010292226.1| | PREDICTED: phosphatidylinositol transfer protein beta isoform, partial [Phaethon lepturus] | 0.0 |
| habu1_s399842_g24625.t2 | gi|701303573|ref|XP_010012407.1| | PREDICTED: phosphatidylinositol transfer protein beta isoform, partial [Nestor notabilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 13.7 |
| Venom grand-1 | 18.0 |
| Pit, infrared sensing | 15.1 |
| Nose | 14.4 |
| Brain-1 | 12.2 |
| Eye | 17.1 |
| fetal fibroblast | 28.3 |
| venom gland-2 | 24.4 |
| Brain-2 | 12.3 |
| Spleen | 16.5 |
| Lung | 17.7 |
| Liver | 12.9 |
| Kidney | 11.7 |
| Pancreas | 20.4 |
| Small intestine | 15.9 |
| Large intestine | 17.3 |
| Stomach | 16.7 |
| heart | 22.1 |
| ovary | 46.2 |
| cheek muscle | 13.1 |
Transcript
| Transcript ID | habu1_s399842_g24625.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24625.t1 gagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggggcggggggggggagcgacctat tactggaagagccacggctgtatttctggggagtgtcagggttagggagcctgggacaggctgagaaggcagcgtatact ttcaaaaaggagcaagtaatgattgcggaaatacatacgtagcccctttgtgctgagctcatgcaaagttgtgggaggaa tgtgtttatgaagaaattgctaaaatgggagtaaaaactgttgatcttattttttggcaaaaataaacctatgactctgc ttcctcatagcaaagtgcctggctttgtgcggatgtttgctccggaaggttccctagtatttcatgaaaaagcctggaat gcatatccttactgtagaacagtcgttacgaatgaatacatgaaagaggatttttttatcaaaattgagacttggcataa acctgacttgggcacgtcggacaatgtccatgacttggatcccaatacatggaaaaatgtggaagttgttcatatcgata tagcagacagaaaccaagtggagcctggagactacaaagctgatgaagaccccgcattgttccagtcggtcaagaccaaa agaggccctttggggactgactggaagaaggagttggcagctgctgaagattgtcccaagatgtgtgcttacaagctggt gaccatcaagtttaagtggtggggattgcagaataaaattgagaatttcattcagaagcaagaaaagaggatattcacca acttccatcggcagcttttctgctggattgatcggtggattgacctgacgatggaagacatccggcgaatggaggatgaa acccaaagagagctggaggcgatgcgtaagaagggttgtgtccgaggaacattggctgccagcgcctagaggaaaccctc ggtagggtcagaggcaaataaccccactgtttgcgcaatcaaggagaagtgagaggaacgagtgccgcgaacgatgagtg aaggaaaacatcatgtgcgtgtggtgtcacaatccacccttggggtgtgagtgggtgcacagttctttacacatttgtgc atgcatgcacacagaaacatgtacacatacacactgggtgcatacttgtcctgagctgctgctccgaggcaccgagatct ccccaagaggccctgcctttgtgctgtatatccaaagctaattaaacccacctagtgtcaattaccaggaagaagagaat gaattatgtcagttggaacatttccaaactaaagatgctggaccaacttactttatcttatcttttataatatagatgag agattctccttgctaggacttagtttgtctctgtttagagttagatgtgcatcagcaattaattttccaatttgtgtggt tcattcacaatttggcatagacattctgaatgtatttatagatatttatttctgaattatcactttcttgaaatcagatc atttctagtagtaaggatcactgaggtgtgtgtttgttttttttttacaaaaaaacattttcacccatttgctgcgaaga gatctattttattggagttttgtatataaagagtcgatggtttcttctttaaaattggcaaagtaaaagggaacacaaag gggattatggatctttgttttttagaactgttcatggactcaaaccagtctggaggaataatgttccaggacagccttag tgctgttttcagaacactcctcggtcttccactatttcatccaagaaactgtgcataagctctgttttgcatcaactata ggaaaaactaacatttttccagtaccctttggaaactgatatcctgacttgcaaaaccttccacagatttcttaaaagaa gagaggatcccagtagcaacttattccaggcctaattaagtgggagggctctcagtttggcttgccctacaggagttcac gcccacagattgacggggctccaagggccaatgcaaggactgttcatccgtccattttcgggaagtgaggctcgtgtgtg tctgaagtgggcggttcagcctctaactctggccacacaggaaggcttgtacgttttcccactggagaattggctttgta aatacataatatttttaagaggttgataatttgggctgctgctaattcaagggcttgctgtgtttagtgcaggaatctgc tcccgtcagtaccaaggagagcatccagtgccaggccctgcaagacttgggtctgtgcctagtttggggcaggattagat gtgaaaattgagaggaaattttatagtgaatgtaaaatgattacttctgcagtttctagcttaactgcgtcaagacaatt taaataaatttgcttataaaatatccacaactttgcatttggattcagttcaagtgggaaggggggtattacacactgag gcaaagctgtgggtcaggaacacagaagagatagaaaattgggcttttttcctagatggctataactcctgcatttccac aaggaagcaattcatggattccgaggttcagcccctccctccatccccaatagcaaagggaacattgcaagccctggaag attttttttccctctctcttctaaagtcttacatggtagttttattctgccattcacctaatatttttgaaagtttgttt ttaaaagttgtctcattcttagccttgatgttcagatttctgttgcagtgtaaaggtttctcatctgcttgcttgagcct ggaagacgaggggaactttctgacagaatttgtgtctggagggaaccgtccttggagaccagggcaggcacagctgcatc ccaagactcctgcattcccacgatgcaaggatattgtcctctctgatgaaaagcccccccctccaaattgcaacatttgg caaagtatagattgtgaaactatactgctcacaaaaataaagggaacgcaaaccccttcagtt |
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| Transcript ID | habu1_s399842_g24625.t2 |
| Definition | - |
>habu1_s399842_g24625.t2 gagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggggcggggggggggagcgacctat tactggaagagccacggctgtatttctggggagtgtcagggttagggagcctgggacaggctgagaaggcagcgtatact ttcaaaaaggagcaagtaatgattgcggaaatacatacgtagcccctttgtgctgagctcatgcaaagttgtgggaggaa tgtgtttatgaagaaattgctaaaatgggagtaaaaactgttgatcttattttttggcaaaaataaacctatgactctgc ttcctcatagcaaagtgcctggctttgtgcggatgtttgctccggaaggttccctagtatttcatgaaaaagcctggaat gcatatccttactgtagaacagtcgttacgaatgaatacatgaaagaggatttttttatcaaaattgagacttggcataa acctgacttgggcacgtcggacaatgtccatgacttggatcccaatacatggaaaaatgtggaagttgttcatatcgata tagcagacagaaaccaagtggagcctggagactacaaagctgatgaagaccccgcattgttccagtcggtcaagaccaaa agaggccctttggggactgactggaagaaggagttggcagctgctgaagattgtcccaagatgtgtgcttacaagctggt gaccatcaagtttaagtggtggggattgcagaataaaattgagaatttcattcagaagcaagaaaagaggatattcacca acttccatcggcagcttttctgctggattgatcggtggattgacctgacgatggaagacatccggcgaatggaggatgaa acccaaagagagctggaggcgttgcgcaatcaaggagaagtgagaggaacgagtgccgcgaacgatgagtgaaggaaaac atcatgtgcgtgtggtgtcacaatccacccttggggtgtgagtgggtgcacagttctttacacatttgtgcatgcatgca cacagaaacatgtacacatacacactgggtgcatacttgtcctgagctgctgctccgaggcaccgagatctccccaagag gccctgcctttgtgctgtatatccaaagctaattaaacccacctagtgtcaattaccaggaagaagagaatgaattatgt cagttggaacatttccaaactaaagatgctggaccaacttactttatcttatcttttataatatagatgagagattctcc ttgctaggacttagtttgtctctgtttagagttagatgtgcatcagcaattaattttccaatttgtgtggttcattcaca atttggcatagacattctgaatgtatttatagatatttatttctgaattatcactttcttgaaatcagatcatttctagt agtaaggatcactgaggtgtgtgtttgttttttttttacaaaaaaacattttcacccatttgctgcgaagagatctattt tattggagttttgtatataaagagtcgatggtttcttctttaaaattggcaaagtaaaagggaacacaaaggggattatg gatctttgttttttagaactgttcatggactcaaaccagtctggaggaataatgttccaggacagccttagtgctgtttt cagaacactcctcggtcttccactatttcatccaagaaactgtgcataagctctgttttgcatcaactataggaaaaact aacatttttccagtaccctttggaaactgatatcctgacttgcaaaaccttccacagatttcttaaaagaagagaggatc ccagtagcaacttattccaggcctaattaagtgggagggctctcagtttggcttgccctacaggagttcacgcccacaga ttgacggggctccaagggccaatgcaaggactgttcatccgtccattttcgggaagtgaggctcgtgtgtgtctgaagtg ggcggttcagcctctaactctggccacacaggaaggcttgtacgttttcccactggagaattggctttgtaaatacataa tatttttaagaggttgataatttgggctgctgctaattcaagggcttgctgtgtttagtgcaggaatctgctcccgtcag taccaaggagagcatccagtgccaggccctgcaagacttgggtctgtgcctagtttggggcaggattagatgtgaaaatt gagaggaaattttatagtgaatgtaaaatgattacttctgcagtttctagcttaactgcgtcaagacaatttaaataaat ttgcttataaaatatccacaactttgcatttggattcagttcaagtgggaaggggggtattacacactgaggcaaagctg tgggtcaggaacacagaagagatagaaaattgggcttttttcctagatggctataactcctgcatttccacaaggaagca attcatggattccgaggttcagcccctccctccatccccaatagcaaagggaacattgcaagccctggaagatttttttt ccctctctcttctaaagtcttacatggtagttttattctgccattcacctaatatttttgaaagtttgtttttaaaagtt gtctcattcttagccttgatgttcagatttctgttgcagtgtaaaggtttctcatctgcttgcttgagcctggaagacga ggggaactttctgacagaatttgtgtctggagggaaccgtccttggagaccagggcaggcacagctgcatcccaagactc ctgcattcccacgatgcaaggatattgtcctctctgatgaaaagcccccccctccaaattgcaacatttggcaaagtata gattgtgaaactatactgctcacaaaaataaagggaacgcaaaccccttcagtt |
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Protein
| Protein ID | habu1_s399842_g24625.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24625.t1 MTLLPHSKVPGFVRMFAPEGSLVFHEKAWNAYPYCRTVVTNEYMKEDFFIKIETWHKPDLGTSDNVHDLDPNTWKNVEVV HIDIADRNQVEPGDYKADEDPALFQSVKTKRGPLGTDWKKELAAAEDCPKMCAYKLVTIKFKWWGLQNKIENFIQKQEKR IFTNFHRQLFCWIDRWIDLTMEDIRRMEDETQRELEAMRKKGCVRGTLAASA |
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| Protein ID | habu1_s399842_g24625.t2 |
| Definition | - |
>habu1_s399842_g24625.t2 MTLLPHSKVPGFVRMFAPEGSLVFHEKAWNAYPYCRTVVTNEYMKEDFFIKIETWHKPDLGTSDNVHDLDPNTWKNVEVV HIDIADRNQVEPGDYKADEDPALFQSVKTKRGPLGTDWKKELAAAEDCPKMCAYKLVTIKFKWWGLQNKIENFIQKQEKR IFTNFHRQLFCWIDRWIDLTMEDIRRMEDETQRELEALRNQGEVRGTSAANDE |
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