Gene
| Gene Model ID | habu1_s399842_g24628 |
|---|---|
| Locus | habu1_scaffold399842 : 1496603 ... 1511209 : - |
| To GenomeBrowser | habu1_scaffold399842:1496603..1511209 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tetratricopeptide repeat protein 28-like | GO:0005813 GO:0007346 GO:0030496 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24628.t1 | 1 | 1 | TPR_11 | 73 | 133 | 9.1e-13 | 47.6 | 8.1e-16 | 1.3e-12 | 47.1 |
| habu1_s399842_g24628.t1 | 1 | 1 | TPR_2 | 104 | 134 | 5.0e-08 | 32.2 | 4.6e-07 | 0.00076 | 19.2 |
| habu1_s399842_g24628.t1 | 1 | 1 | TPR_1 | 105 | 134 | 4.2e-07 | 29.2 | 1.8e-06 | 0.003 | 17.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24628.t1 | gi|602675520|ref|XP_007443238.1| | PREDICTED: serine/threonine-protein kinase Chk2, partial [Python bivittatus] | 0.0 |
| habu1_s399842_g24628.t1 | gi|675640875|ref|XP_009006793.1| | PREDICTED: tetratricopeptide repeat protein 28-like [Callithrix jacchus] | 2.8026e-45 |
| habu1_s399842_g24628.t1 | gi|426393959|ref|XP_004063271.1| | PREDICTED: tetratricopeptide repeat protein 28-like [Gorilla gorilla gorilla] | 8.40779e-45 |
| habu1_s399842_g24628.t1 | gi|731506766|ref|XP_010597070.1| | PREDICTED: tetratricopeptide repeat protein 28-like [Loxodonta africana] | 9.80909e-45 |
| habu1_s399842_g24628.t1 | gi|472361140|ref|XP_004400168.1| | PREDICTED: tetratricopeptide repeat protein 28-like [Odobenus rosmarus divergens] | 1.96182e-44 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.8 |
| Venom grand-1 | 2.0 |
| Pit, infrared sensing | 3.2 |
| Nose | 2.4 |
| Brain-1 | 2.7 |
| Eye | 3.1 |
| fetal fibroblast | 2.6 |
| venom gland-2 | 5.7 |
| Brain-2 | 2.2 |
| Spleen | 3.3 |
| Lung | 5.2 |
| Liver | 1.6 |
| Kidney | 1.3 |
| Pancreas | 6.5 |
| Small intestine | 3.1 |
| Large intestine | 4.1 |
| Stomach | 2.6 |
| heart | 3.7 |
| ovary | 0.4 |
| cheek muscle | 1.0 |
Transcript
| Transcript ID | habu1_s399842_g24628.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24628.t1 ccttcaaagacttccaccagggctggagccggacagacctctgcagagctgctattccagagggcaagacaggcttccta ggctctgataggtggcattgtttgggcaaggggattaagttctcagttgctgccgcagttccagcaggagagagggtggc agtgtagagatgccccagggcgaggaaagcctctatcggtagcatttatgccccaaaggaaggtggagcttccttccgtt cacagcctgatgtttccttggtgcagcttttgacctggttcagaggttgctagttgtggaccccaccaggcgcttgaaaa tagaagaggccttggagcacccctggctgcaggatgcacctatgaggcatacttttcaacagatacttgctcaaacacag gacatgagagttaagcctgagcctctgacttcggtatgtactccttgcctttgcttttgttcttgaagaagggaccaagc agctccatgattttatgtctggcttgccaaataacagcatgtccctgtctggtgcattgagcctggggctaaaagggcag aggcagcaagctgaccgcagtgcaccccatggcttccgtgtgcttgccagtagcagagcctctaagcgaatgcccctttc cccttgccagatgactctgttcgggtccagaagccttgaggataagggctccagcgggcccaccctgagtaaggctcagt ttgtggagaaggtgcgacagagcaaccaggcttgccatgcaggcgactaccccagagccatcctgctctatggcgaagcc ttgggggtcgatccccagaactgcatcctctacagcaatcgctccgtggcatatatgaagatccagcagtacgacagggc tctggaggatgccatcaaggcccagcttctgaaccccaaatggccgaaggtagggatgtccacactgagatggagcatga gcagcacagagaaggctccaacttctggggattccagttttggaaagaaagaggtgccctcagagtgtgagccgaatgtg cccccgtagcttctgctttatgctcctttgtcctccatggtgctgtctactggcaagccccccccaggacctccattggt taccaagaagcgcagatggagaaaggggtgcaggaacctaccttcattgtgtgggtcaagcaataaggggaggaggagga aattcagcatttatgtttttaaaagccaggttcaaggggccccgccaatttgtagcccatagtctctgcactgcaagact ttttgtggctgatcacgctcggctttgcttagagcaaaggggcttgttgtggcgttcctaattcccgatcccagtgtctg aagaagcccatgtgggtctcccttcttgcaagagcttcgtcctggcatctctcttgaaaggccaaagccaaggcagggat gccaagtagctgagcgtcaggttaggattccagtgggatcttttgagagtcaaggcaagttgaggcaggtgtgtttgcct ttgggctgttaaatttagctcaaaagctccatttttttcaaagcagaaaagtgcagggatttagagcaatggggcagtcc ctgcaaaggtagaggcattctgagtcagtgaataagaaggcttaaaatatctggtatttccaagctcttatcttctccca ttcccaattttgtacaatcaataccaccagcttgcaatgctgctgacatgagcgcctgtgccctctcccccccccaagct taggagagagggggatcttttctccttccagcataagaaaatgggcctttaacactatactgagaagcagctgttgacct tccaagacagcggtggcaaaatcgggctcccctgcttccatcttctgagccaatctgaatgtttcactcaggaggctaca atcatttcatatcccagtgacgttcacgaaaactgctcagatgcagaagcgaacttgatgtggccccagagtggaaacgg ggaagtgggctacggtagaaggctggcagcatttcccctccttcctatggggtggtgttgactttttcctgttgacaatt ggaaacaattgttcaatttggaaacaattgttctcatgtttacaggcagcaagaccagggctgggagccatcctgtgtct tgagagcagcagtcttgacatgcagcagaaaacctggcagctgtgtgagggccactcagccgttccttttccatcaattg cagggttacttcaggagctttgctccaagcctgacgcactttcctccacagcatcccacttaacgatctgcctgcactaa ttagggggaatcgtctccaggggccagcttcagaattttgtggtggtttctctccctgaggtctacagagcctgggaggt ttggtttccttggaatgcacgtgcattcagagaggaagagaaaggctgacctggtgttggaaagaactgccggaggagag gccgtgggtttgggtaggagcccttcatagccacttggtccaaggaaagtgtcctgccacccaccgtggcctggtggccc tgtctctcgggacccgacatgggaacagccctgggcagtatggcttggagaatccaagcgggtggccccagagaggtgcc aaaggtcagctgcgtggctggaaggcagactgctgtcctgactggagatctggcctcagccctggggacgtgagaaggag gttggcaggtctacatcaggagagggaagaaaggtctgccttttgtcccttaagtcatggtgccggcagggcctgatgtc tgagctgttcaagaggagagcggtgctgaggtccagtgggccttcctaggaagaactccactcacccgtgttactggtac catctcccagctcggcatcttttgctggacgttccctggaaacacccattgtctccagctagccaagcatgcctgttccc tcttgcaagtccccagtaccacatcagtcacaactgctgcctgaatacgggcagaagagttcctcgcaggagagcctccc ttcctccttggagctggcccggttttctaagacgtttggccagagaacagaactgggcagcctccttggtattttgctca gttgggcgaaacttactgggaaggtgggcaaaactggcactggtacctgcagccctgggtgacctgactctgcttgcaaa gcttggactgccccgcctggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaatcgaggtgatgattccttggggtggggggggaacgggtgtcata attccatgtttaactaagggttttgtggcctggctttgagtcaaaataatagagcttaaaatatttttggaatctgaaaa ataaacaatgccttacatagtacatgtatgtatgtatccaagggaagtccttcacagaatatttttgtaacctgatcagt ttttttttaacatagctcattttgccttcagcaatgtttgccaagcaggtttattgtgtggtttttctgtttggattgtt tgtggtaatacttaagctcctccagaagcaaatgaggaaaagaagttgcttggacgcaattcttctcttgttcctgacat ggaatttgttctcatctagtggacaaatagtaggcaggcctgttttcccctattttgcatgtgtgaatctgttaatggca ataaccttggaccctccagaagagcaaggcaaggaaagaggaaggatcccaagggagcttggtctccggcaatgtccgtt cccggggagggggtctgcactcttctccaccacctccagtctggcaggtgagacaggcttgccctttggagcaaatgagc gccagcgcattctggtggccgaagcccatgtttgtccaccggcaggagcgagggcttcctctgaaccttatgggggaagg tttgtttccacgctcaccctctaaggccaagccaggtggggtctgctcccttcagtgaaatggagctggaatctctttgg cccagcttgtcagaaggtgcagctgcagagtatccaaccctgaaattacactagggtttctaggtgggtgctgttaaaat tacaatcgtattcctgtttttcctattctgtgtgtatctgtgtgcgcgcacacacacgtgcaggtagctcatatggtcag gtgcagccttgggttttggtgctgggaaaggggtaaactgctaggtttcaagagtgaatgccta |
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Protein
| Protein ID | habu1_s399842_g24628.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24628.t1 MSLSGALSLGLKGQRQQADRSAPHGFRVLASSRASKRMPLSPCQMTLFGSRSLEDKGSSGPTLSKAQFVEKVRQSNQACH AGDYPRAILLYGEALGVDPQNCILYSNRSVAYMKIQQYDRALEDAIKAQLLNPKWPKVGMSTLRWSMSSTEKAPTSGDSS FGKKEVPSECEPNVPP |
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