Gene
| Gene Model ID | habu1_s399842_g24630 |
|---|---|
| Locus | habu1_scaffold399842 : 1516750 ... 1518592 : + |
| To GenomeBrowser | habu1_scaffold399842:1516750..1518592 |
| Genes list of scaffold | habu1_scaffold399842 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24630.t2 | 1 | 1 | HSCB_C | 55 | 127 | 1.2e-15 | 57.6 | 3.4e-19 | 1.7e-15 | 57.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24630.t2 | gi|620961768|ref|XP_007665734.1| | PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial [Ornithorhynchus anatinus] | 2.94273e-44 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 25.6 |
| Venom grand-1 | 64.5 |
| Pit, infrared sensing | 29.7 |
| Nose | 21.8 |
| Brain-1 | 9.9 |
| Eye | 23.8 |
| fetal fibroblast | 26.6 |
| venom gland-2 | 60.3 |
| Brain-2 | 10.9 |
| Spleen | 49.5 |
| Lung | 31.7 |
| Liver | 102.1 |
| Kidney | 55.5 |
| Pancreas | 106.8 |
| Small intestine | 62.8 |
| Large intestine | 38.5 |
| Stomach | 80.2 |
| heart | 20.4 |
| ovary | 17.4 |
| cheek muscle | 44.2 |
Transcript
| Transcript ID | habu1_s399842_g24630.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24630.t1 gctcgggacccttccccgcagccgcgcccaggcccccgggccggctacgcaccgcagtcgggaaagccccgggccaggcc gaagaggtgtccccacggccggggcgcctccgccgcctccgcctccgcctccgcctcctcctggtcctcggggatggcgg gcagccgccgaccgcaggccgagcgcggcttctcggagcagcacgccgccctgatcaacctggcttattgcaccctccgc cgcccgctcagccgcggcctttacctgctggagctgcacggagtcgagttggcggcgggcagcgatgcggaggccgagcc cggcttcctcgccgagatcttggagctgaacgagcagttggcggccgcgggctcggaagcgagcctggctgcgctggagc gcctcctggcagccaagcaagagggtctgttgcaggaggtgaccttcccaaggccaaaagactcttgagcaaaatgaaat actttgcgaaccttgaggagaaggtgaaggaaaagaaagccccttcgtgatccctcatcctgtttcgggcaacccaggat gcactttggcttgtcccttccttgacgagagagccattcggagattgaggggagggggcaggtagcagccttctcctgtc tctgcttgtgcgccagaaagagaagctgcctgtgacggagcccacaaatcaaaataaaggcgctctgggtatccgtctcg gtttctgtgtatgaaaggtgcttggtcaagatggtgcctacttcttgcgtctcttggcagaagttggcccaccatgcacg gagagactttttactgcctgcaggatagtaggcattagagcagggaagcaagggctgtttgccccacccttttcctctgc agccgggagtctaaggcacgctggggtgggttcacagaggtcgccaggactgaaagggcacagggtctcctgcccaaagc tgttcaggaaagtttctcaagtggtcacaccatttgaatgaccaagccctgaagccgcaccagggctgaagactggcttc gctcaaggatcgtggagtaaacctataagcaagaggtggggtc |
|
| Transcript ID | habu1_s399842_g24630.t2 |
| Definition | - |
>habu1_s399842_g24630.t2 gctcgggacccttccccgcagccgcgcccaggcccccgggccggctacgcaccgcagtcgggaaagccccgggccaggcc gaagaggtgtccccacggccggggcgcctccgccgcctccgcctccgcctccgcctcctcctggtcctcggggatggcgg gcagccgccgaccgcaggccgagcgcggcttctcggagcagcacgccgccctgatcaacctggcttattgcaccctccgc cgcccgctcagccgcggcctttacctgctggagctgcacggagtcgagttggcggcgggcagcgatgcggaggccgagcc cggcttcctcgccgagatcttggagctgaacgagcagttggcggccgcgggctcggaagcgagcctggctgcgctggagc gcctcctggcagccaagcaagagggtctgttgcaggaggtgagcagggctttcgagcaaggtgaccttcccaaggccaaa agactcttgagcaaaatgaaatactttgcgaaccttgaggagaaggtgaaggaaaagaaagccccttcgtgatccctcat cctgtttcgggcaacccaggatgcactttggcttgtcccttccttgacgagagagccattcggagattgaggggaggggg caggtagcagccttctcctgtctctgcttgtgcgccagaaagagaagctgcctgtgacggagcccacaaatcaaaataaa ggcgctctgggtatccgtctcggtttctgtgtatgaaaggtgcttggtcaagatggtgcctacttcttgcgtctcttggc agaagttggcccaccatgcacggagagactttttactgcctgcaggatagtaggcattagagcagggaagcaagggctgt ttgccccacccttttcctctgcagccgggagtctaaggcacgctggggtgggttcacagaggtcgccaggactgaaaggg cacagggtctcctgcccaaagctgttcaggaaagtttctcaagtggtcacaccatttgaatgaccaagccctgaagccgc accagggctgaagactggcttcgctcaaggatcgtggagtaaacctataagcaagaggtggggtc |
|
Protein
| Protein ID | habu1_s399842_g24630.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24630.t1 MAGSRRPQAERGFSEQHAALINLAYCTLRRPLSRGLYLLELHGVELAAGSDAEAEPGFLAEILELNEQLAAAGSEASLAA LERLLAAKQEGLLQEVTFPRPKDS |
|
| Protein ID | habu1_s399842_g24630.t2 |
| Definition | - |
>habu1_s399842_g24630.t2 MAGSRRPQAERGFSEQHAALINLAYCTLRRPLSRGLYLLELHGVELAAGSDAEAEPGFLAEILELNEQLAAAGSEASLAA LERLLAAKQEGLLQEVSRAFEQGDLPKAKRLLSKMKYFANLEEKVKEKKAPS |
|