Gene
| Gene Model ID | habu1_s399842_g24634 |
|---|---|
| Locus | habu1_scaffold399842 : 1544150 ... 1555869 : + |
| To GenomeBrowser | habu1_scaffold399842:1544150..1555869 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc ring finger protein partial | GO:0030178 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24634.t1 | 1 | 1 | zf-rbx1 | 100 | 143 | 1.5e-07 | 31.4 | 3.9e-10 | 5.8e-07 | 29.5 |
| habu1_s399842_g24634.t1 | 1 | 1 | zf-RING_2 | 101 | 143 | 9.7e-14 | 50.9 | 6.5e-17 | 9.7e-14 | 50.9 |
| habu1_s399842_g24634.t1 | 1 | 1 | zf-C3HC4 | 102 | 142 | 4.0e-06 | 26.3 | 2.7e-09 | 4.0e-06 | 26.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24634.t1 | gi|602676548|ref|XP_007443738.1| | PREDICTED: E3 ubiquitin-protein ligase ZNRF3-like isoform X2 [Python bivittatus] | 0.0 |
| habu1_s399842_g24634.t1 | gi|602676546|ref|XP_007443737.1| | PREDICTED: E3 ubiquitin-protein ligase ZNRF3-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s399842_g24634.t1 | gi|514789285|ref|XP_005029707.1| | PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform X2 [Anas platyrhynchos] | 0.0 |
| habu1_s399842_g24634.t1 | gi|514789281|ref|XP_005029706.1| | PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform X1 [Anas platyrhynchos] | 0.0 |
| habu1_s399842_g24634.t1 | gi|557259215|ref|XP_006015292.1| | PREDICTED: E3 ubiquitin-protein ligase ZNRF3 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.7 |
| Venom grand-1 | 5.1 |
| Pit, infrared sensing | 4.4 |
| Nose | 5.4 |
| Brain-1 | 3.2 |
| Eye | 5.3 |
| fetal fibroblast | 2.9 |
| venom gland-2 | 10.4 |
| Brain-2 | 3.1 |
| Spleen | 2.8 |
| Lung | 4.3 |
| Liver | 2.3 |
| Kidney | 1.7 |
| Pancreas | 6.2 |
| Small intestine | 2.7 |
| Large intestine | 2.3 |
| Stomach | 3.0 |
| heart | 2.6 |
| ovary | 3.4 |
| cheek muscle | 1.8 |
Transcript
| Transcript ID | habu1_s399842_g24634.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24634.t1 agcccaacctttgtccaaggcttgggcaaatattttcttgaaaaccttcagcaatggggcatacacagctctgggaggca aactgtttcactgattaatcgttctattttccttcaaagctagtttgtgcggtggcttcaagatagagtctttgcagcaa actcctgagtggaagcatcggtaattcccttttgcttcttatcggggactttggggccgctctgatgccagttctgtgga tgagttcagcaagcaagcagacatcttgcataagttcttcagtcttcatgtggtcctgcaggaaaagagctgtcagtggg attttgaggtgcattttcacagaagctctctcctcttttcttagatgcatccattgggactctgcaacagcaatgatgaa gaagacttatatgaatatggctgggttggagttgtgaagctggagcagcctgacctggaaccaaaaccctgcctcactgt tctgggcaaggccaagcgggcagttcaaagaggagccacagctgtcatttttgatgtgtccgaaaacccagatgccattg atcagctgaatcagggcttggaggacccactgaaaagaccagttgtttatgtgaagggggcagatgcagtcaagctgatg aacattgttaacaaacagaaagtggcacgggccagaatccagcaccgtccaccaccacaacccaccgaatactttgacat ggggattttccttgccttttttgtggtggtctctctggtttgcctggttcttctcatcaagatcaaattgaagcagcgtc gcagccagagctctatgaacaggctggctgtgcaggcgctggaaaagatggagacgcggaagttcaaatccaagctgaaa gggccctgcgaaggcagctgcggtgccctggacacgctcagcaatggctctgcctcggactgcgctatttgcttggagaa gtacctggacggggaggagctgcgtgtgattccctgcacccaccggttccacaggaagtgtgtggatccttggcttctgc agcatcacacttgcccccactgccgtcacaacatcattgagcaaaagaagggaaacaccagcctggtgtgtgaggagacg gccagccagttacacagccggcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcgcatgatcct gcctgtccacttccctggccgagcacacagaggtggtcacgtcactgcctaccccacgcgcaccagcatggaccctcacg ggaaccccatcaccgtcttgacggttgatcggcatggagaggccccggccttcttacggagctacccgcccatcctgcac ctggagcctcacctgggcacagccgaacgccagccctgtacaatgcctcatcctttccagaggccgaagttcagcgggga ccctttctccaagccggcttgcttctcccagtacgagaccatgtttcagcactactacttccagggcctcagttaccctg agccgccacagagtggacagttccccctccacgtggctgccaagggccccccccgtgccttccagcctctcggcagccac aggctctttccccctgcggtccacgttgccccatcctcccagccagagagtggcagtgcttctggcttcagctgttaccg tggccaccgctcgatctgcagcggctacttggccgatggtcctggcagtgacagcagtagcagtggcggtggccgctctg gccggtgccactgctcctccaacgactccatggtggactgcacagaagtcagcaaccaggggatctacgggagctgctcc actttccgcagctcgctgagtagcgactacgacccctacatctaccgcagcaaaagcccctgccggagcggagaaaaaag cagggtcctccatggggagatgatgcttctggaaggttcctctgcgctgcacctggtggcagacaacagccagtctgggc cagccgctgcagcaagggaccagctatctgactgcagccttgaaatgaattacagcagcagcagcagcagcagcagcagc cgctcttcgctggagcagaaggaacaggcctgcaccctctctgagcgaggaggcccacggctgctccccgagaccactgg agagacaggtcagactgggagggagccttgtgaccaagcgtgtggctgctgcttggaagtacctgcttccccaagggaat tgccaagtagggcagctggtggcggcagcagcacgctacttcagggcacgccactttggacagggggtggctctttgcga gagccccagacaaggagaagtcagggcatggtcagcattaggacacagggggtcccttgtgaagccttgccctgttactt ctacgaagagaagcgggtggccagcagtggccccatctggccaggccgttacacggaagactgtgcggtgaatgttcggt atgtgtgtgcagaagaccccttgccgggctgctatccgggcctgcgtgagacgggccagtgcattgccattattcccgaa gtccgggactccgagctggccctgccagtagattgctatagcggcagcagcccttgggagacaccatgtggaacaacagc ccccagccaggcccaggggacgcccatgaaggcatttggcgagccaggagagatacggcaagaagggtcatgcccgccca tggtgggcttcccgctggaggagtcctgcgggctcttttccagccctccgcaagattgtttggaggccgtggccgctgga gaaggccctcagactttgg |
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Protein
| Protein ID | habu1_s399842_g24634.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24634.t1 MNIVNKQKVARARIQHRPPPQPTEYFDMGIFLAFFVVVSLVCLVLLIKIKLKQRRSQSSMNRLAVQALEKMETRKFKSKL KGPCEGSCGALDTLSNGSASDCAICLEKYLDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKKGNTSLVCEE TASQLHSRQQQQQQQQQQQQQQQQRMILPVHFPGRAHRGGHVTAYPTRTSMDPHGNPITVLTVDRHGEAPAFLRSYPPIL HLEPHLGTAERQPCTMPHPFQRPKFSGDPFSKPACFSQYETMFQHYYFQGLSYPEPPQSGQFPLHVAAKGPPRAFQPLGS HRLFPPAVHVAPSSQPESGSASGFSCYRGHRSICSGYLADGPGSDSSSSGGGRSGRCHCSSNDSMVDCTEVSNQGIYGSC STFRSSLSSDYDPYIYRSKSPCRSGEKSRVLHGEMMLLEGSSALHLVADNSQSGPAAAARDQLSDCSLEMNYSSSSSSSS SRSSLEQKEQACTLSERGGPRLLPETTGETGQTGREPCDQACGCCLEVPASPRELPSRAAGGGSSTLLQGTPLWTGGGSL REPQTRRSQGMVSIRTQGVPCEALPCYFYEEKRVASSGPIWPGRYTEDCAVNVRYVCAEDPLPGCYPGLRETGQCIAIIP EVRDSELALPVDCYSGSSPWETPCGTTAPSQAQGTPMKAFGEPGEIRQEGSCPPMVGFPLEESCGLFSSPPQDCLEAVAA GEGPQTL |
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