Gene
| Gene Model ID | habu1_s4012_g13212 |
|---|---|
| Locus | habu1_scaffold4012 : 331196 ... 336895 : + |
| To GenomeBrowser | habu1_scaffold4012:331196..336895 |
| Genes list of scaffold | habu1_scaffold4012 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| metalloreductase steap4 | GO:0005768 GO:0005886 GO:0008823 GO:0015677 GO:0045444 GO:0052851 GO:0055114 GO:0070062 GO:0097461 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4012_g13212.t1 | 1 | 1 | F420_oxidored | 22 | 106 | 3.9e-11 | 43.2 | 2.9e-14 | 7.3e-11 | 42.3 |
| habu1_s4012_g13212.t1 | 1 | 1 | Ferric_reduct | 248 | 393 | 1.1e-23 | 83.7 | 4.3e-27 | 1.1e-23 | 83.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4012_g13212.t1 | gi|602643791|ref|XP_007428353.1| | PREDICTED: metalloreductase STEAP4 [Python bivittatus] | 0.0 |
| habu1_s4012_g13212.t1 | gi|327274760|ref|XP_003222144.1| | PREDICTED: metalloreductase STEAP4 [Anolis carolinensis] | 0.0 |
| habu1_s4012_g13212.t1 | gi|591384664|ref|XP_007066785.1| | PREDICTED: metalloreductase STEAP4 [Chelonia mydas] | 0.0 |
| habu1_s4012_g13212.t1 | gi|557260663|ref|XP_006015971.1| | PREDICTED: metalloreductase STEAP4 [Alligator sinensis] | 0.0 |
| habu1_s4012_g13212.t1 | gi|564244487|ref|XP_006261377.1| | PREDICTED: metalloreductase STEAP4 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 41.9 |
| Venom grand-1 | 6.2 |
| Pit, infrared sensing | 16.3 |
| Nose | 42.3 |
| Brain-1 | 0.4 |
| Eye | 3.9 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 2.8 |
| Brain-2 | 0.1 |
| Spleen | 1.4 |
| Lung | 15.9 |
| Liver | 1.6 |
| Kidney | 14.9 |
| Pancreas | 3.4 |
| Small intestine | 6.7 |
| Large intestine | 26.6 |
| Stomach | 0.7 |
| heart | 0.5 |
| ovary | 0.5 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s4012_g13212.t1 |
|---|---|
| Definition | - |
>habu1_s4012_g13212.t1 accaagatgtataatctaataggtacttgagaatcagactgatttttttttatttttagcaataagttaacatgaacaat tctgcattgtaggaataatttcagatatgtctgaaaatgtcaatccaatgattccacttacttcagatatgcccagcaag atggagacggtgtgcatttttggaacgggtgattttggaagatctctgggctataagctgatgcagtgtggctattccgt tgtttatgggagccgaagcactcaaaacaccggactgattcctcaaggagccacaatcctatctcatgcagaagctgctg aaacatctgacattatcattgtagcagtccagagagtgcattacaactttcttgaaagcctacgagaaatccttgatgaa aaagtgttggtggacgtgagcaacaaccttaaaataaaccagtatgccgaatcgaatgctgaatatcttgcccagctgct cccaggcagtaaagtggtcaaagcgtttaatacagtgtcagcatgggccctgcaatcaggaggcttggatgcaagcagac aggtattcatctgtggagatgatcgaaaagcaaaagaaaaagtgatggagattgttcggagtcttggtcttactcctttg gataaaggttctctcttagcatcaaaagaaattgagaattaccctttacaactttttccaatgtggagatttcccatcta cctctcttttgctctcagtgcattcatatttttatacagtgttgtccgtgatatcatctataatcatgttgagaatggca aaaataattctttttttattgctgttacaattgcaaaccggatctgccctgttgtggcgctcgttcttcttgcattggtc tatttacctggaatctttgcagctattctccagttatacagaggtacaaagtacagtcgttttcctgattggctggataa atggatgctctgccggaaacaactgggattggtcgccttggcttatgctttcctacatgttttatatacactgatcatcc ccattcgttactatgtaagatggagggccaattcttttgtccttgaacaggtatttaaaaacaaaacagaaccattttgg actggctttgcctggcacagtgattcttaccttgctttgggaatcttaggttttttcctgtttcttctccttgggataac atcgttgccttctgtcagcaacagtgttaattggagagagtttaggtttgtgcagtcttatctgggctaccttacactgg ttttgtgtactgcccatacactgggatatggtgggaagaggttcttgaatcatctctcatacccatggttccttcctcca atttatttgctctctctcattattccttgcatcgtgttgttcatcaagtttttcctaatatttccatgtatagacagacc attaactgaaattcgacagggctgggagaggaaacacaaacatatgaaccactcaaacagcaatcagaacaccaaagaat tgtcatctgtataattcctgaattcctgttaatctgtatattttgaaaaggactgagcatagtcaaagcactaaccagca gagacgcattgaaaaaaatatcttgaatatgagcttttgtgagtgatcagggaagaactttataaaccacatctgtcaca tttggaatgagtttctgcaagttttcaggattatgctcagatacccataaaacggttataggatttcagaccagcaatag ctttccagccaaagatctctatataaatacactataaaatatacatatctatagtgctacctgcatacaaattgcatttt ctttctatcagtatctttcaatccataaagaaatttcgtttatctatgggaagctatgactttattgtgagcttaacagg agggctgcataagagaaccctacactcgacactctttggcaatcaagaatgtgaacaagaaatgctaaaatccagtctta ctaaagtatacctaacaaaacatgaaaaagcaataaaaacattccctgattctaatgca |
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Protein
| Protein ID | habu1_s4012_g13212.t1 |
|---|---|
| Definition | - |
>habu1_s4012_g13212.t1 MSENVNPMIPLTSDMPSKMETVCIFGTGDFGRSLGYKLMQCGYSVVYGSRSTQNTGLIPQGATILSHAEAAETSDIIIVA VQRVHYNFLESLREILDEKVLVDVSNNLKINQYAESNAEYLAQLLPGSKVVKAFNTVSAWALQSGGLDASRQVFICGDDR KAKEKVMEIVRSLGLTPLDKGSLLASKEIENYPLQLFPMWRFPIYLSFALSAFIFLYSVVRDIIYNHVENGKNNSFFIAV TIANRICPVVALVLLALVYLPGIFAAILQLYRGTKYSRFPDWLDKWMLCRKQLGLVALAYAFLHVLYTLIIPIRYYVRWR ANSFVLEQVFKNKTEPFWTGFAWHSDSYLALGILGFFLFLLLGITSLPSVSNSVNWREFRFVQSYLGYLTLVLCTAHTLG YGGKRFLNHLSYPWFLPPIYLLSLIIPCIVLFIKFFLIFPCIDRPLTEIRQGWERKHKHMNHSNSNQNTKELSSV |
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