Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s402966_g24980
Locus habu1_scaffold402966 : 37228 ... 52425 : -
To GenomeBrowser habu1_scaffold402966:37228..52425
Genes list of scaffold habu1_scaffold402966

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s402966_g24980.t1 gi|602648389|ref|XP_007430611.1| PREDICTED: uncharacterized protein LOC103055610 [Python bivittatus] 0.0
habu1_s402966_g24980.t1 gi|327279506|ref|XP_003224497.1| PREDICTED: UPF0450 protein C17orf58 homolog [Anolis carolinensis] 0.0
habu1_s402966_g24980.t1 gi|530578066|ref|XP_005282970.1| PREDICTED: UPF0450 protein C17orf58 homolog isoform X1 [Chrysemys picta bellii] 0.0
habu1_s402966_g24980.t1 gi|558104998|ref|XP_006110654.1| PREDICTED: uncharacterized protein LOC102456493 [Pelodiscus sinensis] 0.0
habu1_s402966_g24980.t1 gi|557263878|ref|XP_006017422.1| PREDICTED: uncharacterized protein LOC102379254 [Alligator sinensis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.9
Venom grand-1 0.1
Pit, infrared sensing 0.8
Nose 0.4
Brain-1 0.5
Eye 0.8
fetal fibroblast 0.0
venom gland-2 0.1
Brain-2 1.6
Spleen 0.0
Lung 9.1
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.2
Large intestine 0.1
Stomach 0.2
heart 1.1
ovary 0.1
cheek muscle 0.3

Transcript
Transcript IDhabu1_s402966_g24980.t1
Definition-
>habu1_s402966_g24980.t1
acccggacggaacaacctgcttgatttttaggcggtgcgactgcgggagaaaaaggcatttaaaccggagccaccgaaat
cggggtagcatccctctccggcctgttgaaagctaagaaataacttggggaggggattgaaaggtgccagcgagggtggc
cgggacttgcagtccaatttggtctagttcctgggctctcaccagtcccgttttccccaaggatgcctctcattagcatg
ggggcggtgggggcgggcggagagggccaaaactgaaagcggggggagaaaaagaggagtggagggagagagagagagag
agagagaaaggaagggggaggaagaggagggagaggaagaaaaagagggagagaaagaaaagagggagagggagaaagcg
aaagagagaaagagaaggagaaagggaaagggggagggagaaaggggaagagtgaggggaagaaagagggggaaggaggg
aaagagagaagtggagagggagagagaaagaaaacagagggagaaagagagggagagagggagagggagaaaaagagaga
gcgatagggagagggaaaaagagagtgggagagagattggctgactgcctctcctttgcaatgacacccggagctgtctg
gctcctgtgcttcgccttggcctcctcctcctcctcgctccccacctccggggtagcaggcgagaccagccgatctttgt
tctcaccagctgttgtcatgggaaagagacaaataaatgatgaagtcaacagacaggagacttgggaagtggacttgaat
caaccatcagaatcagccatgggaatcctgagccaaccatggacactgcctcatagtggaaaatccatgaagaccttcag
caaggatgtttatgggtctggaggtgccattccttcccagaacaagtctctccgaggtagcagcattagctacattgaga
gggctgagcacacgaaggaccagttcctacctcgaaatgagtggactcctttggaagtgaaagcattaaacgtactccag
ctactcttggataaaaggaaaaatgtgaaaaaatcagtggagaatcagacaggcttaagaaagcagtctgctcaggatgc
caaaggccttccttcccttagtcatgaggtatcactctctaccacttacttgagtcaaaagaaccaaatcagcagaaatc
ggctccactcggaatctgccaacagcatctctacttacttccatccacctggatattcccactgccaaggtagacttctg
gcggaagcatctatgttgaaaaacacagggtcaaatgttggtcaacactctggtcacttggatcacctcaaccgggccgg
gaagaaaaacccttaccacaaactccatggattcctccgaaatatcactaaaccctattggctcacaaaccgacatactc
caagcttactgaaagacttcagcgcctttaagatggatgttgacaatctagaagtatgcttgactggttgcaaaagggaa
cgtgaggaagtagaggcttactgtagcagtgaatttgtggtgaatggaattgttcatgatattgtcatgatatacaaagg
aacatatttggtgaccatgctggtgaacaacaatggactctacaagacaaatcggctgttcctcaaccctgatggctact
tctttcgagttcaaatgcttgttgtggatgccctgaattgtaacaaacactgtccagactttcaactcggcggcagaagt
ggtatttaaaatgtacacacattacactggctcataaataaagtttttcaaaaaactaaaaatt

Protein
Protein IDhabu1_s402966_g24980.t1
Definition-
>habu1_s402966_g24980.t1
MTPGAVWLLCFALASSSSSLPTSGVAGETSRSLFSPAVVMGKRQINDEVNRQETWEVDLNQPSESAMGILSQPWTLPHSG
KSMKTFSKDVYGSGGAIPSQNKSLRGSSISYIERAEHTKDQFLPRNEWTPLEVKALNVLQLLLDKRKNVKKSVENQTGLR
KQSAQDAKGLPSLSHEVSLSTTYLSQKNQISRNRLHSESANSISTYFHPPGYSHCQGRLLAEASMLKNTGSNVGQHSGHL
DHLNRAGKKNPYHKLHGFLRNITKPYWLTNRHTPSLLKDFSAFKMDVDNLEVCLTGCKREREEVEAYCSSEFVVNGIVHD
IVMIYKGTYLVTMLVNNNGLYKTNRLFLNPDGYFFRVQMLVVDALNCNKHCPDFQLGGRSGI

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