Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s402966_g24981
Locus habu1_scaffold402966 : 69606 ... 76884 : +
To GenomeBrowser habu1_scaffold402966:69606..76884
Genes list of scaffold habu1_scaffold402966

Annotation by Blast2GO
Annotation GO
importin subunit alpha-1 GO:0005634 GO:0005737 GO:0006606 GO:0008565

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s402966_g24981.t3 1 1 IBB 7 99 2.0e-25 88.7 1.5e-28 3.7e-25 87.9
habu1_s402966_g24981.t3 8 1 Arm 109 149 0.0 244.8 4.6e-12 1.1e-08 34.5
habu1_s402966_g24981.t3 1 1 HEAT_2 122 199 3.7e-14 52.7 2.1e-07 0.00052 20.2
habu1_s402966_g24981.t3 1 1 HEAT_EZ 135 189 3.9e-13 49.4 2.4e-08 6.0e-05 23.4
habu1_s402966_g24981.t3 8 2 Arm 152 190 0.0 244.8 1.5e-13 3.8e-10 39.2
habu1_s402966_g24981.t3 8 3 Arm 194 238 0.0 244.8 1.3e-11 3.2e-08 33.0
habu1_s402966_g24981.t3 8 4 Arm 245 280 0.0 244.8 1.6e-09 3.9e-06 26.4
habu1_s402966_g24981.t3 8 5 Arm 283 321 0.0 244.8 3.5e-07 0.00086 19.0
habu1_s402966_g24981.t3 8 6 Arm 324 364 0.0 244.8 3.9e-14 9.8e-11 41.0
habu1_s402966_g24981.t3 8 7 Arm 367 405 0.0 244.8 1.4e-11 3.6e-08 32.9
habu1_s402966_g24981.t3 8 8 Arm 411 447 0.0 244.8 6.8e-06 0.017 14.9

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 10.8
Venom grand-1 6.7
Pit, infrared sensing 12.5
Nose 10.6
Brain-1 6.1
Eye 6.5
fetal fibroblast 236.2
venom gland-2 20.3
Brain-2 7.5
Spleen 7.3
Lung 5.3
Liver 4.1
Kidney 6.7
Pancreas 3.8
Small intestine 5.8
Large intestine 7.6
Stomach 9.1
heart 5.4
ovary 429.6
cheek muscle 6.4

Transcript
Transcript IDhabu1_s402966_g24981.t1
Definition-
>habu1_s402966_g24981.t1
gcaagaagtttaaatcacacctcgcggagggggacgagagtggggagtttcgcagctccagcagttcggcgcaacgtgtt
ggggcgctgtcggtttcaatggattttcctcaagagtaactgcaggcctaaagtaaatttccagagtaaaggaaataagt
taagaaattgttgagctcatttccttcggaagagaaaaaatgctttgatgcaggactctaatccccttattcagacgcat
aaagtttgaaaccaaggcaactgtgtatcttaaacgttctcaaactaggaaagtttaagtataactaccatttaggtttg
aataaaatatgcttggaacagagctgcctcttaggctgtaaactgcatcttttccagtgtttaccagctataggtttaaa
ggcatatctatataacattcacaatgtctaccaatgagaatgctggggcaacggctgcccgcctgaacagattcaagaac
aagggcaaagattccgatgaaatgaggcgacgacggatggaagtcaatgtagagttgagaaaagctaaaaaagatgacca
aatgcttaaaaggcgaaatgtaggcacatttccagatgatgccacttcacctctgcaagaaaatcggggcaatcaggttg
ctgtccactggtctgttgaagaaattgttaaaggcattaataatactaatttagaataccagctgcaggctactcaggct
gccaggaaactgctgtcccgagaaaagcagccccctatagaccagattattagagctggattgataccaaaatttgtgtc
ctttttgggaaaagcaaactgcagccctattcagtttgaagctgcttgggcactgaccaatattgcttccggcacatctg
accagacaaaagctgtagtagagggtggagcaatatctgcctttatatctcttctggcttcttctcatactcacattagt
gagcaagctgtatgggctttggggaatatcgcaggtgatggctctgcttatagagacttagttattaaatatggtgcact
cgacccacttttggctctgcttgctgttcctgatctctcttctatatctgttggctacttacgtaacataacttggactc
tgtcaaacctctgccgtaacaagaatcctgcaccacccattgaagctgttgaacagattctgcccactttagttcgccta
ctgcatcaccatgaccatgaagttttggcagacacatgttgggctatttcttatttgactgatgggtcaaatgatagaat
tgaagtagtggtcaaaactggcttagtgccacaattggtgaaactgctagcatgtggagaagttccaataatgactccat
cattaagagctataggaaacattgtaacagggactgatgagcaaactcaaacagtaatagatgctggagcattagctgtc
ttcccaagtctgcttattcaccccaaaaacaacatccagaaagaagctgcatggactatgtctaacataactgctggccg
ccaggatcagatccagaaggttgtggaccatgggcttgttccatatcttgttagcatcttaaaaaagggagactttaaat
cccagaaggaagcagtatgggcagtgaccaactatacaagtggaggaacaattagccagatcatctaccttgttcagacc
agtgtattagagccattattggatctgcttgtggttaaagacagcaaaacagtcctggtgattctggatgctattactaa
tatttttatggcggctgaaaaaataggtgaggttgaaaagctgtgcatcgtgattgaagaaaatggcggcttagacaaaa
ttgaagctctacaatcccatgaaaatgagcagatttacaaatcggctgcaaatctgattgaaaaatatttttcagcagag
gaggaagacgatgagaatgttattccagaatctggttctgatgcatatacattccaaattcaagacggttctgatacctt
caagttttgagtctcttgtctgaccgtcttcagcctagttttttttcccctcctttctgttctgtctcttacactgcctt
ttttctatgtgaaatagcactttgtttcaactaaaactacttgaacagatcatggcagttacatatgccaagtgaacttg
tgtcttcttatatgtccttttttgtattctgtaaattctccatttctgaatctactgcctttcagtagtggatgtaccta
gatttagattatatccatactacagttgatcagacagaaatggtttgtgaaccttaattctcagtttggtttgcagacca
cacaatgtttgttagcaaaagcaaacctctcaaactgattttaaagaatacttgttcaaatgaaataaactgtatttgag
tatcatccaaa
Transcript IDhabu1_s402966_g24981.t2
Definition-
>habu1_s402966_g24981.t2
gcaacgtgttggggcgctgtcggtttcaatggattttcctcaagagtaactgcaggcctaaagtaaatttccagagtaaa
ggaaataagttaagaaattgttgagctcatttccttcggaagagaaaaaatgctttgatgcaggactctaatccccttat
tcagacgcataaagtttgaaaccaaggcaactgtgtatcttaaacgttctcaaactaggaaagtttaagtataactacca
tttaggtttgaataaaatatgcttggaacagagctgcctcttaggctgtaaactgcatcttttccagtgtttaccagcta
taggtttaaaggcatatctatataacattcacaatgtctaccaatgagaatgctggggcaacggctgcccgcctgaacag
attcaagaacaagggcaaagattccgatgaaatgaggcgacgacggatggaagtcaatgtagagttgagaaaagctaaaa
aagatgaccaaatgcttaaaaggcgaaatgtaggcacatttccagatgatgccacttcacctctgcaagaaaatcggggc
aatcaggttgctgtccactggtctgttgaagaaattgttaaaggcattaataatactaatttagaataccagctgcaggc
tactcaggctgccaggaaactgctgtcccgagaaaagcagccccctatagaccagattattagagctggattgataccaa
aatttgtgtcctttttgggaaaagcaaactgcagccctattcagtttgaagctgcttgggcactgaccaatattgcttcc
ggcacatctgaccagacaaaagctgtagtagagggtggagcaatatctgcctttatatctcttctggcttcttctcatac
tcacattagtgagcaagctgtatgggctttggggaatatcgcaggtgatggctctgcttatagagacttagttattaaat
atggtgcactcgacccacttttggctctgcttgctgttcctgatctctcttctatatctgttggctacttacgtaacata
acttggactctgtcaaacctctgccgtaacaagaatcctgcaccacccattgaagctgttgaacagattctgcccacttt
agttcgcctactgcatcaccatgaccatgaagttttggcagacacatgttgggctatttcttatttgactgatgggtcaa
atgatagaattgaagtagtggtcaaaactggcttagtgccacaattggtgaaactgctagcatgtggagaagttccaata
atgactccatcattaagagctataggaaacattgtaacagggactgatgagcaaactcaaacagtaatagatgctggagc
attagctgtcttcccaagtctgcttattcaccccaaaaacaacatccagaaagaagctgcatggactatgtctaacataa
ctgctggccgccaggatcagatccagaaggttgtggaccatgggcttgttccatatcttgttagcatcttaaaaaaggga
gactttaaatcccagaaggaagcagtatgggcagtgaccaactatacaagtggaggaacaattagccagatcatctacct
tgttcagaccagtgtattagagccattattggatctgcttgtggttaaagacagcaaaacagtcctggtgattctggatg
ctattactaatatttttatggcggctgaaaaaataggtgaggttgaaaagctgtgcatcgtgattgaagaaaatggcggc
ttagacaaaattgaagctctacaatcccatgaaaatgagcagatttacaaatcggctgcaaatctgattgaaaaatattt
ttcagcagaggaggaagacgatgagaatgttattccagaatctggttctgatgcatatacattccaaattcaagacggtt
ctgataccttcaagttttgagtctcttgtctgaccgtcttcagcctagttttttttcccctcctttctgttctgtctctt
acactgccttttttctatgtgaaatagcactttgtttcaactaaaactacttgaacagatcatggcagttacatatgcca
agtgaacttgtgtcttcttatatgtccttttttgtattctgtaaattctccatttctgaatctactgcctttcagtagtg
gatgtacctagatttagattatatccatactacagttgatcagacagaaatggtttgtgaaccttaattctcagtttggt
ttgcagaccacacaatgtttgttagcaaaagcaaacctctcaaactgattttaaagaatacttgttcaaatgaaataaac
tgtatttgagtatcatccaaa
Transcript IDhabu1_s402966_g24981.t3
Definition-
>habu1_s402966_g24981.t3
gcaacgtgttggggcgctgtcgggtttaaaggcatatctatataacattcacaatgtctaccaatgagaatgctggggca
acggctgcccgcctgaacagattcaagaacaagggcaaagattccgatgaaatgaggcgacgacggatggaagtcaatgt
agagttgagaaaagctaaaaaagatgaccaaatgcttaaaaggcgaaatgtaggcacatttccagatgatgccacttcac
ctctgcaagaaaatcggggcaatcaggttgctgtccactggtctgttgaagaaattgttaaaggcattaataatactaat
ttagaataccagctgcaggctactcaggctgccaggaaactgctgtcccgagaaaagcagccccctatagaccagattat
tagagctggattgataccaaaatttgtgtcctttttgggaaaagcaaactgcagccctattcagtttgaagctgcttggg
cactgaccaatattgcttccggcacatctgaccagacaaaagctgtagtagagggtggagcaatatctgcctttatatct
cttctggcttcttctcatactcacattagtgagcaagctgtatgggctttggggaatatcgcaggtgatggctctgctta
tagagacttagttattaaatatggtgcactcgacccacttttggctctgcttgctgttcctgatctctcttctatatctg
ttggctacttacgtaacataacttggactctgtcaaacctctgccgtaacaagaatcctgcaccacccattgaagctgtt
gaacagattctgcccactttagttcgcctactgcatcaccatgaccatgaagttttggcagacacatgttgggctatttc
ttatttgactgatgggtcaaatgatagaattgaagtagtggtcaaaactggcttagtgccacaattggtgaaactgctag
catgtggagaagttccaataatgactccatcattaagagctataggaaacattgtaacagggactgatgagcaaactcaa
acagtaatagatgctggagcattagctgtcttcccaagtctgcttattcaccccaaaaacaacatccagaaagaagctgc
atggactatgtctaacataactgctggccgccaggatcagatccagaaggttgtggaccatgggcttgttccatatcttg
ttagcatcttaaaaaagggagactttaaatcccagaaggaagcagtatgggcagtgaccaactatacaagtggaggaaca
attagccagatcatctaccttgttcagaccagtgtattagagccattattggatctgcttgtggttaaagacagcaaaac
agtcctggtgattctggatgctattactaatatttttatggcggctgaaaaaataggtgaggttgaaaagctgtgcatcg
tgattgaagaaaatggcggcttagacaaaattgaagctctacaatcccatgaaaatgagcagatttacaaatcggctgca
aatctgattgaaaaatatttttcagcagaggaggaagacgatgagaatgttattccagaatctggttctgatgcatatac
attccaaattcaagacggttctgataccttcaagttttgagtctcttgtctgaccgtcttcagcctagttttttttcccc
tcctttctgttctgtctcttacactgccttttttctatgtgaaatagcactttgtttcaactaaaactacttgaacagat
catggcagttacatatgccaagtgaacttgtgtcttcttatatgtccttttttgtattctgtaaattctccatttctgaa
tctactgcctttcagtagtggatgtacctagatttagattatatccatactacagttgatcagacagaaatggtttgtga
accttaattctcagtttggtttgcagaccacacaatgtttgttagcaaaagcaaacctctcaaactgattttaaagaata
cttgttcaaatgaaataaactgtatttgagtatcatccaaa

Protein
Protein IDhabu1_s402966_g24981.t1
Definition-
>habu1_s402966_g24981.t1
MSTNENAGATAARLNRFKNKGKDSDEMRRRRMEVNVELRKAKKDDQMLKRRNVGTFPDDATSPLQENRGNQVAVHWSVEE
IVKGINNTNLEYQLQATQAARKLLSREKQPPIDQIIRAGLIPKFVSFLGKANCSPIQFEAAWALTNIASGTSDQTKAVVE
GGAISAFISLLASSHTHISEQAVWALGNIAGDGSAYRDLVIKYGALDPLLALLAVPDLSSISVGYLRNITWTLSNLCRNK
NPAPPIEAVEQILPTLVRLLHHHDHEVLADTCWAISYLTDGSNDRIEVVVKTGLVPQLVKLLACGEVPIMTPSLRAIGNI
VTGTDEQTQTVIDAGALAVFPSLLIHPKNNIQKEAAWTMSNITAGRQDQIQKVVDHGLVPYLVSILKKGDFKSQKEAVWA
VTNYTSGGTISQIIYLVQTSVLEPLLDLLVVKDSKTVLVILDAITNIFMAAEKIGEVEKLCIVIEENGGLDKIEALQSHE
NEQIYKSAANLIEKYFSAEEEDDENVIPESGSDAYTFQIQDGSDTFKF
Protein IDhabu1_s402966_g24981.t2
Definition-
>habu1_s402966_g24981.t2
MSTNENAGATAARLNRFKNKGKDSDEMRRRRMEVNVELRKAKKDDQMLKRRNVGTFPDDATSPLQENRGNQVAVHWSVEE
IVKGINNTNLEYQLQATQAARKLLSREKQPPIDQIIRAGLIPKFVSFLGKANCSPIQFEAAWALTNIASGTSDQTKAVVE
GGAISAFISLLASSHTHISEQAVWALGNIAGDGSAYRDLVIKYGALDPLLALLAVPDLSSISVGYLRNITWTLSNLCRNK
NPAPPIEAVEQILPTLVRLLHHHDHEVLADTCWAISYLTDGSNDRIEVVVKTGLVPQLVKLLACGEVPIMTPSLRAIGNI
VTGTDEQTQTVIDAGALAVFPSLLIHPKNNIQKEAAWTMSNITAGRQDQIQKVVDHGLVPYLVSILKKGDFKSQKEAVWA
VTNYTSGGTISQIIYLVQTSVLEPLLDLLVVKDSKTVLVILDAITNIFMAAEKIGEVEKLCIVIEENGGLDKIEALQSHE
NEQIYKSAANLIEKYFSAEEEDDENVIPESGSDAYTFQIQDGSDTFKF
Protein IDhabu1_s402966_g24981.t3
Definition-
>habu1_s402966_g24981.t3
MSTNENAGATAARLNRFKNKGKDSDEMRRRRMEVNVELRKAKKDDQMLKRRNVGTFPDDATSPLQENRGNQVAVHWSVEE
IVKGINNTNLEYQLQATQAARKLLSREKQPPIDQIIRAGLIPKFVSFLGKANCSPIQFEAAWALTNIASGTSDQTKAVVE
GGAISAFISLLASSHTHISEQAVWALGNIAGDGSAYRDLVIKYGALDPLLALLAVPDLSSISVGYLRNITWTLSNLCRNK
NPAPPIEAVEQILPTLVRLLHHHDHEVLADTCWAISYLTDGSNDRIEVVVKTGLVPQLVKLLACGEVPIMTPSLRAIGNI
VTGTDEQTQTVIDAGALAVFPSLLIHPKNNIQKEAAWTMSNITAGRQDQIQKVVDHGLVPYLVSILKKGDFKSQKEAVWA
VTNYTSGGTISQIIYLVQTSVLEPLLDLLVVKDSKTVLVILDAITNIFMAAEKIGEVEKLCIVIEENGGLDKIEALQSHE
NEQIYKSAANLIEKYFSAEEEDDENVIPESGSDAYTFQIQDGSDTFKF

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