Gene
| Gene Model ID | habu1_s402966_g24982 |
|---|---|
| Locus | habu1_scaffold402966 : 88926 ... 166056 : + |
| To GenomeBrowser | habu1_scaffold402966:88926..166056 |
| Genes list of scaffold | habu1_scaffold402966 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ubiquitin-protein ligase smurf2 | EC:6.3.2.19 GO:0000151 GO:0004842 GO:0016567 GO:0016874 GO:0030579 GO:0042802 GO:0046332 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402966_g24982.t3 | 1 | 1 | C2 | 20 | 99 | 1.5e-14 | 53.6 | 4.9e-18 | 2.4e-14 | 52.9 |
| habu1_s402966_g24982.t3 | 1 | 1 | WW | 162 | 191 | 1.9e-11 | 43.5 | 9.1e-15 | 4.5e-11 | 42.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s402966_g24982.t3 | gi|426347063|ref|XP_004041179.1| | PREDICTED: E3 ubiquitin-protein ligase SMURF2-like, partial [Gorilla gorilla gorilla] | 0.0 |
| habu1_s402966_g24982.t3 | gi|701307710|ref|XP_010014693.1| | PREDICTED: E3 ubiquitin-protein ligase SMURF2-like, partial [Nestor notabilis] | 0.0 |
| habu1_s402966_g24982.t3 | gi|685599237|ref|XP_009189294.1| | PREDICTED: E3 ubiquitin-protein ligase SMURF2 isoform X1 [Papio anubis] | 0.0 |
| habu1_s402966_g24982.t3 | gi|524932203|ref|XP_005070286.1| | PREDICTED: E3 ubiquitin-protein ligase SMURF2 [Mesocricetus auratus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.8 |
| Venom grand-1 | 8.6 |
| Pit, infrared sensing | 4.5 |
| Nose | 3.0 |
| Brain-1 | 3.8 |
| Eye | 4.7 |
| fetal fibroblast | 64.8 |
| venom gland-2 | 10.4 |
| Brain-2 | 3.3 |
| Spleen | 4.8 |
| Lung | 2.9 |
| Liver | 7.3 |
| Kidney | 8.6 |
| Pancreas | 7.7 |
| Small intestine | 6.3 |
| Large intestine | 5.6 |
| Stomach | 4.6 |
| heart | 3.9 |
| ovary | 64.9 |
| cheek muscle | 7.6 |
Transcript
| Transcript ID | habu1_s402966_g24982.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g24982.t1 cggttggggtcgtgatattaaaaaggttgagaaccactgctctaattaattatattgaagtcccttccagggaaagcctg gagttataatctgttcctataattgttcacattatatattttaaaatgggtaggaaatatacaggtcacaaaagggattc acttaaccccaggacactgcaacagtcataaacatgagtcacttgcaaagcatctgaattttgatcacatgaccatgagg atgctgcaacggtttagagcttatgacaactgtatagtggagtataacccccaagttctctgtgcaaaaaatttggtgaa aaaggattttttccgacttcctgatccatttgctaaagtggtggtggacggatctggccagtgccattctactgatactg tgaagaatacccttgatccaaagtggaatcagcattatgacttatacattggaaagtctgactctataacaatcagtgta tggaaccacaagaaaatccataaaaaacagggagctggttttctgggttgtgtgagacttctttctaacgctatcaaccg cctcaaagatactggttatcagagattagatctgtgcaaacttgggccgagtgacaatgacacagttagaggacagatag tagtaagtcttcagtccagagatcggataggcacaggagggcaagttgttgattgcagtagactatttgacaatgattta cctgatggttgggaagaaaggaggacagcttctggaagaattcagtatttgaatcatatcacgcgaacaacacagtggga gagaccaacacggccagcatcggaatattccagtcctggcagacctctgagttgctttgtggatgagaacacaccggtta caggaataaatggtgcaacgtgtggacagtcatttgaccccaggctagccgaaaggagagttagatctcagaggcatagg aattacatgagcaggactcacctgcatactcctccagatctacctgagggatatgagcaaaggacaactcagcaagggca ggtgtatttcctacatactcaaactggtgtaagcacatggcacgatccccgtgtacctcgggatcttagcaacatcaatt gtgaagagcttgggcctttgcctcctggatgggaaatccgaaatacagccacaggcagagtttattttgttgaccataac aacaggacgacacagtttacagatccacgattatcggctaatttgcacctggtgctaaaccgtcaaaatcaacttaaaga ccagccacaacagcagcaacaagttgtttcgctctgccagctttcagacgaggctgaatgtctcactgtgccaaggtata aacgagatctagtacaaaaactcaagattttgaggcaagagctctcccagcaacagccccaagctggacattgtcgtata gaggtctccagggaggaaatttttgaggagtcttatagacaagtcatgaagatgagaccgaaagacctatggaagagatt aatgataaaatttcgtggggaagaaggccttgattatggcggtgttgccagggaatggctgtatttgctatcccatgaaa tgctgaatccgtattatggcctcttccagtattcccgtgatgacatctatactttacagataaatccagattctgctgtt aatccggaacatttatcctacttccactttgttggtcgaatcatggggatggctgtgtttcacggacattatattgatgg gggctttacgttgcctttttataaacagctgctaggaaaatcaattacattggatgacatggaactagttgacccagatc ttcacaacagcttagtatggatacttgagaatgatattacaggagtcttagaccacacattttgtgtggagcacaatgca tatggtgaaatcatacagcatgaacttaagcccaatggcaaaagcattcctgtcacagaagagaataaaaaagaatatgt caggttatatgtaaactggcggtttttaagaggaattgaagctcagttcctggctctgcagaagggttttaatgaagtaa ttccacagcatctgctgaaaacatttgatgagaaggaactagagctcatcatttgtggccttgggaagatagacgtgaac gactggaaggccaacacaaggttaaaacattgcacccccgatagcaacattgtcaagtggttctggaaagctgtggagct ctttgatgaagagaggagggctcgattgctacagtttgtgaccggatcatccagagtgcctcttcagggtttcaaagcat tacaaggtgctgctggcccaagactgtttaccattcaccagattgatgccagcacaaataatctgccaaaagctcatacc tgcttcaatcggatagacattcctccttacgaaagctatgagaagctctatgaaaagctgctaaccgccattgaagaaac atgtgggtttgccgtggaatgattgtttgcagacctgcgtggaactctatttatactccaagcagaaaatcctttcctca gccatgataccataaatgcttgaaatataggaaaacccccctccccttttctactagaggacgatatgagggaaaggacc atttttggaattcttcattcaagaaaaatgttctgtggctgctgccaagaaataattcagctgctattaaaaactagtat cttgaacctgcagaatgctgacttttccttcatttcaacagttaagcagtattctctttgaaagacgactactatttttt ataaaaggtgatctgatttgtttgcttacctgatttctactatcagaggtccaagggacagctcttggtacaagccacat tccagctgacttatatacatgtgattctggacaagcacctgtacttgctattttttaaaataaagtattttgattattct aatttt |
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| Transcript ID | habu1_s402966_g24982.t2 |
| Definition | - |
>habu1_s402966_g24982.t2 cgtgatattaaaaaggttgagaaccactgctctaattaattatattgaagtcccttccagggaaagcctggagttataat ctgttcctataattgttcacattatatattttaaaatgggtaggaaatatacaggtcacaaaagggattcacttaacccc aggacactgcaacagtcataaacatgagtcacttgcaaagcatctgaattttgatcacatgaccatgaggatgctgcaac ggtttagagcttatgacaactgtatagtggagtataacccccaagttctctgtgcaaaaaatttggtgaaaaaggatttt ttccgacttcctgatccatttgctaaagtggtggtggacggatctggccagtgccattctactgatactgtgaagaatac ccttgatccaaagtggaatcagcattatgacttatacattggaaagtctgactctataacaatcagtgtatggaaccaca agaaaatccataaaaaacagggagctggttttctgggttgtgtgagacttctttctaacgctatcaaccgcctcaaagat actggttatcagagattagatctgtgcaaacttgggccgagtgacaatgacacagttagaggacagatagtagtaagtct tcagtccagagatcggataggcacaggagggcaagttgttgattgcagtagactatttgacaatgatttacctgatggtt gggaagaaaggaggacagcttctggaagaattcagtatttgaatcatatcacgcgaacaacacagtgggagagaccaaca cggccagcatcggaatattccagtcctggcagacctctgagttgctttgtggatgagaacacaccggttacaggaataaa tggtgcaacgtgtggacagtcatttgaccccaggctagccgaaaggagagttagatctcagaggcataggaattacatga gcaggactcacctgcatactcctccagatctacctgagggatatgagcaaaggacaactcagcaagggcaggtgtatttc ctacatactcaaactggtgtaagcacatggcacgatccccgtgtacctcgggatcttagcaacatcaattgtgaagagct tgggcctttgcctcctggatgggaaatccgaaatacagccacaggcagagtttattttgttgaccataacaacaggacga cacagtttacagatccacgattatcggctaatttgcacctggtgctaaaccgtcaaaatcaacttaaagaccagccacaa cagcagcaacaagttgtttcgctctgccagctttcagacgaggctgaatgtctcactgtgccaaggtataaacgagatct agtacaaaaactcaagattttgaggcaagagctctcccagcaacagccccaagctggacattgtcgtatagaggtctcca gggaggaaatttttgaggagtcttatagacaagtcatgaagatgagaccgaaagacctatggaagagattaatgataaaa tttcgtggggaagaaggccttgattatggcggtgttgccagggaatggctgtatttgctatcccatgaaatgctgaatcc gtattatggcctcttccagtattcccgtgatgacatctatactttacagataaatccagattctgctgttaatccggaac atttatcctacttccactttgttggtcgaatcatggggatggctgtgtttcacggacattatattgatgggggctttacg ttgcctttttataaacagctgctaggaaaatcaattacattggatgacatggaactagttgacccagatcttcacaacag cttagtatggatacttgagaatgatattacaggagtcttagaccacacattttgtgtggagcacaatgcatatggtgaaa tcatacagcatgaacttaagcccaatggcaaaagcattcctgtcacagaagagaataaaaaagaatatgtcaggttatat gtaaactggcggtttttaagaggaattgaagctcagttcctggctctgcagaagggttttaatgaagtaattccacagca tctgctgaaaacatttgatgagaaggaactagagctcatcatttgtggccttgggaagatagacgtgaacgactggaagg ccaacacaaggttaaaacattgcacccccgatagcaacattgtcaagtggttctggaaagctgtggagctctttgatgaa gagaggagggctcgattgctacagtttgtgaccggatcatccagagtgcctcttcagggtttcaaagcattacaaggtgc tgctggcccaagactgtttaccattcaccagattgatgccagcacaaataatctgccaaaagctcatacctgcttcaatc ggatagacattcctccttacgaaagctatgagaagctctatgaaaagctgctaaccgccattgaagaaacatgtgggttt gccgtggaatgattgtttgcagacctgcgtggaactctatttatactccaagcagaaaatcctttcctcagccatgatac cataaatgcttgaaatataggaaaacccccctccccttttctactagaggacgatatgagggaaaggaccatttttggaa ttcttcattcaagaaaaatgttctgtggctgctgccaagaaataattcagctgctattaaaaactagtatcttgaacctg cagaatgctgacttttccttcatttcaacagttaagcagtattctctttgaaagacgactactattttttataaaaggtg atctgatttgtttgcttacctgatttctactatcagaggtccaagggacagctcttggtacaagccacattccagctgac ttatatacatgtgattctggacaagcacctgtacttgctattttttaaaataaagtattttgattattctaatttt |
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| Transcript ID | habu1_s402966_g24982.t3 |
| Definition | - |
>habu1_s402966_g24982.t3 cgtgatattaaaaaggttgagaaccactgctctaattaattatattgaagtcccttccagggaaagcctggagttataat ctgttcctataattgttcacattatatattttaaaatgggtaggaaatatacaggtcacaaaagggattcacttaacccc aggacactgcaacagtcataaacatgagtcacttgcaaagcatctgaattttgatcacatgaccatgaggatgctgcaac ggtttagagcttatgacaactgtatagtggagtataacccccaagttctctgtgcaaaaaatttggtgaaaaaggatttt ttccgacttcctgatccatttgctaaagtggtggtggacggatctggccagtgccattctactgatactgtgaagaatac ccttgatccaaagtggaatcagcattatgacttatacattggaaagtctgactctataacaatcagtgtatggaaccaca agaaaatccataaaaaacagggagctggttttctgggttgtgtgagacttctttctaacgctatcaaccgcctcaaagat actggttatcagagattagatctgtgcaaacttgggccgagtgacaatgacacagttagaggacagatagtagtaagtct tcagtccagagatcggataggcacaggagggcaagttgttgattgcagtagactatttgacaatgatttacctgatggtt gggaagaaaggaggacagcttctggaagaattcagtatttgaatcatatcacgcgaacaacacagtgggagagaccaaca cggccagcatcggaatattccagtcctggcagacctctgagttgctttgtggatgagaacacaccggttacaggaataaa tggtgcaacgtgtggacagtcatttgaccccaggctagccgaaaggagagttagatctcagaggcataggaattacatga gcaggactcacctgcatactcctccagatctacctgagggatatgggatcttagcaacatcaattgtgaagagcttgggc ctttgcctcctggatgggaaatccgaaatacagccacaggcagagtttattttgttgaccataacaacaggacgacacag tttacagatccacgattatcggctaatttgcacctggtgctaaaccgtcaaaatcaacttaaagaccagccacaacagca gcaacaagttgtttcgctctgccagctttcagacgaggctgaatgtctcactgtgccaaggtataaacgagatctagtac aaaaactcaagattttgaggcaagagctctcccagcaacagccccaagctggacattgtcgtatagaggtctccagggag gaaatttttgaggtaatgtgagaatgataaattattgctgaattaaaataaaagtcagtacctattattatggt |
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Protein
| Protein ID | habu1_s402966_g24982.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g24982.t1 MTMRMLQRFRAYDNCIVEYNPQVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPKWNQHYDLYIGKSDSI TISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKLGPSDNDTVRGQIVVSLQSRDRIGTGGQVVDCSRLF DNDLPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCFVDENTPVTGINGATCGQSFDPRLAERRVRS QRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYF VDHNNRTTQFTDPRLSANLHLVLNRQNQLKDQPQQQQQVVSLCQLSDEAECLTVPRYKRDLVQKLKILRQELSQQQPQAG HCRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINP DSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILENDITGVLDHTFCV EHNAYGEIIQHELKPNGKSIPVTEENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGK IDVNDWKANTRLKHCTPDSNIVKWFWKAVELFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLP KAHTCFNRIDIPPYESYEKLYEKLLTAIEETCGFAVE |
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| Protein ID | habu1_s402966_g24982.t2 |
| Definition | - |
>habu1_s402966_g24982.t2 MRMLQRFRAYDNCIVEYNPQVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPKWNQHYDLYIGKSDSITI SVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKLGPSDNDTVRGQIVVSLQSRDRIGTGGQVVDCSRLFDN DLPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCFVDENTPVTGINGATCGQSFDPRLAERRVRSQR HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYFVD HNNRTTQFTDPRLSANLHLVLNRQNQLKDQPQQQQQVVSLCQLSDEAECLTVPRYKRDLVQKLKILRQELSQQQPQAGHC RIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDS AVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILENDITGVLDHTFCVEH NAYGEIIQHELKPNGKSIPVTEENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKID VNDWKANTRLKHCTPDSNIVKWFWKAVELFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLPKA HTCFNRIDIPPYESYEKLYEKLLTAIEETCGFAVE |
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| Protein ID | habu1_s402966_g24982.t3 |
| Definition | - |
>habu1_s402966_g24982.t3 MRMLQRFRAYDNCIVEYNPQVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPKWNQHYDLYIGKSDSITI SVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKLGPSDNDTVRGQIVVSLQSRDRIGTGGQVVDCSRLFDN DLPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCFVDENTPVTGINGATCGQSFDPRLAERRVRSQR HRNYMSRTHLHTPPDLPEGYGILATSIVKSLGLCLLDGKSEIQPQAEFILLTITTGRHSLQIHDYRLICTWC |
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