Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s402966_g24983
Locus habu1_scaffold402966 : 171568 ... 210215 : -
To GenomeBrowser habu1_scaffold402966:171568..210215
Genes list of scaffold habu1_scaffold402966

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.3
Venom grand-1 3.5
Pit, infrared sensing 1.9
Nose 3.6
Brain-1 1.5
Eye 1.3
fetal fibroblast 4.0
venom gland-2 2.7
Brain-2 1.4
Spleen 1.1
Lung 1.0
Liver 0.7
Kidney 0.7
Pancreas 1.1
Small intestine 0.9
Large intestine 1.3
Stomach 1.1
heart 1.0
ovary 75.4
cheek muscle 1.0

Transcript
Transcript IDhabu1_s402966_g24983.t1
Definition-
>habu1_s402966_g24983.t1
cgcggcctctgtttttccctctgggaacttggttttttaaaaaataaaacctaataatcacctcccttcgttgccgtaga
aaccgaccttggcggaaaataaacaataagcgtaactgaacagatattagctcatccggaactaggcgaggcaataaggc
caaaaggaagtcccgccttttccgcttctagctgaccaatcatcatgcagaaatccggagagcggtccaggatttaaatc
gccgaagctttggcgtcctgcgttttggctgccggcgcggtttttgcgtgaagggtggcggaatggctactgctgcggaa
agaggtgggtgggattggggaaggcttccccaactgaaagtgggaatcggtctccccaaaacgagagatttgatgttttt
tatgccttcctgttgtcatcctccttacacgagtggacggtgctgctcagtaaaaacagcctttttaaaaaaaaattcag
ttcctcaagaacttgtactagaatcgtgtttgtggtctgttacagctccagatgagaaaaacctacacgtgtcataagat
ccgcatatatcaagacttgagcaagttgctttcttgaacagtgtagtttaagaagatatttatgctaaaggataaacata
actgttttaatagttctcttttctcgggcagtaatggggagagtaagattctctggcatgcaaagttagttagtctgcaa
ggtagtaactttaaaaacggaggagaggaagcaaagcctgtaataggttgtggtgaaacggattatactgttgactgaag
tgaagagtagtaattatgtaaataaatctaatgttgcataaagcaggaagaattgttaatattctgaaatagatttccct
atttaaaaatgtttgattggatcaatgttgccaatgatcttctgacaaagtgtaacatacatctgcatgttaatagcctc
tctgactgtggagctgaagtgtttgttcatctttatgagtcgatattaggagaaaaagtccctgatttcatagctgttcc
tacttgccaagaagacaacattcataatgtgcaggcggtgatagattctttggcactggactacttgcagatcagcttat
cacatataactggcgagaatattgtgaaaggagataaggagtctattaggaatctcttggaaatatttgatggcttgctt
gaatatcttacggaagaagtcagtgaaactgcttctcaacaggacgcaggtggtgttaaggtgatggcagaaacagaagt
ccagcccacggattcaaaggagccagaagatggctgtgacatcccagttccctccctagagcaaccctcagctgaaggat
cctctcagtcatcagagctgcttgatccgtcttgggaggctggtggttcagaatctacaagtgagctcattaagcttggt
gacaccgcttatttgttttctctgagaaatgaagtgttaccagcaggaaaagaagtccccaaaaaggctgcaggatctga
agtatatgcaacttttagagaatcatttggtctgtcctccagtggaaaaaaaagtgttatttcagaaaggccagctacag
caaagtccgctcagttgtctcaagagcagttgagttccagtgctaagaagcttggggacccaattcgtccagcaattgct
ttgcagcccccctaccagccttccgtcagtggagtctcttatttagctgaaagaaagaatgatactggagaccaggattc
cccaccacctttatcaccacttaaatctcaggaaccgccatctactgttcttgcagaaccccctgagcgagaatctcctg
ttttttcagatggtatccggtcttttccagatgctacatcttattttccaactgaaccatcagcaacaggaggtggtgta
actagtgaatcgttgccacaagccagttcacatgatgcaggaaaggaaataggcaggagttcgcagcacacatcgatctg
gagttgcaaggagaatggatttactcagttcacccctatacaaaccacaaggcccaaacaaaggaatctgtttattggaa
aaagtcagaatgaacgtcctgctctggcagactcttttgtagaagattctcttccccatagacgagcaaaggcaaaaatc
tctgaaatgtcagagaaactctcccgcaggctgaatgaactggatacgatgttaaagcacgctttgggtgaacaaagccg
ggacgagttgtcagctgatgaggataccctttctcaacacagtgatagcatcatggactatcgccaaaccaaacaacaat
cagatgttcgccgtccaaggaaagcacccagtaggcgacggtcattttctgcttccccacctccgtctaattatcaacca
tcacatgtatctgatagtccaccccagaaggatacagaagagccagcacgaagggtgcgaatctgttggcaaaatgaaca
ggatcaaaggaagttaagaccaaagcatctgagtaaagcttatgatgaagacctaagagcatatgaagctagcgaaagac
tggaacttgcaacgataaaagcaaaggctcaggaaatggagcaaaaatacaaagagaacgtgcttaaagaaactccaaga
atctcacatgcagcaaagatttattctcgaaaaactatacctcggcattccaaactcaaccagaggatttcaagaggagg
gtttgcgaagccaaaaaaagcagctccaatgaaagtcaaagagaacgatctcttgcctttactcctcaaagactttcctc
acatgaacatttctcatccgacgatgaacaagatgtggcagcagcagctctcccaaatagagcgattcaagcctcccaga
gaagggaaccagtggaaactgcagaacgaagtactggaaacactgaagaagcacgatctacttgtggatcttcttaagag
agagcaggctcacaacagaagattgcaagagtttaggcagcgcattgagagacagaaatgtacacagaataaaacgagag
agagacgccagcagattgcccgagccaaaaaatactatcaagattaccggattcagctgcgtgccaagatgatgaggacc
aggacacgggaggaaaggatatttaaacaactgtttgaagaagccttggaaattcagaaacaaagattccttgagttgag
gtcgtatgccaaggaaaaacgtgctgaacaaaagaggcagtatcaagatgaactgcaatccatggaaaactattataaag
atcagtttgcaatgctggctgaagccgtttcagaagaacgtcaagaaatccaaaccagagagcgagcacatgtccagaca
ttaagtaaagtgaaacgtgaactgagatccaagctggagaaagagattaaagagctgcaggacatgatcacacatgatga
tgatgatttgttttttcgagaactagaagctgatcggctgaaatccagactcttggtggcttcttttcagtgtaacaaga
actatctgtttctttaaaggcctggcatgcttgtatcatatctatgtggctttttacaaggagaccagaatcaaaaatat
aaaattagcggtttagtttcctgccccaagaccaagattaagttgatgttatgaaaatattgcactgatattttcaaaac
aagtggttttaaagactttgtcaataaagattagcttccttacaatcaca
Transcript IDhabu1_s402966_g24983.t2
Definition-
>habu1_s402966_g24983.t2
cgttttggctgccggcgcggtttttgcgtgaagggtggcggaatggctactgctgcggaaagagattggatcaatgttgc
caatgatcttctgacaaagtgtaacatacatctgcatgttaatagcctctctgactgtggagctgaagtgtttgttcatc
tttatgagtcgatattaggagaaaaagtccctgatttcatagctgttcctacttgccaagaagacaacattcataatgtg
caggcggtgatagattctttggcactggactacttgcagatcagcttatcacatataactggcgagaatattgtgaaagg
agataaggagtctattaggaatctcttggaaatatttgatggcttgcttgaatatcttacggaagaagtcagtgaaactg
cttctcaacaggacgcaggtggtgttaaggtgatggcagaaacagaagtccagcccacggattcaaaggagccagaagat
ggctgtgacatcccagttccctccctagagcaaccctcagctgaaggatcctctcagtcatcagagctgcttgatccgtc
ttgggaggctggtggttcagaatctacaagtgagctcattaagcttggtgacaccgcttatttgttttctctgagaaatg
aaggaaaagaagtccccaaaaaggctgcaggatctgaagtatatgcaacttttagagaatcatttggtctgtcctccagt
ggaaaaaaaagtgttatttcagaaaggccagctacagcaaagtccgctcagttgtctcaagagcagttgagttccagtgc
taagaagcttggggacccaattcgtccagcaattgctttgcagcccccctaccagccttccgtcagtggagtctcttatt
tagctgaaagaaagaatgatactggagaccaggattccccaccacctttatcaccacttaaatctcaggaaccgccatct
actgttcttgcagaaccccctgagcgagaatctcctgttttttcagatggtatccggtcttttccagatgctacatctta
ttttccaactgaaccatcagcaacaggaggtggtgtaactagtgaatcgttgccacaagccagttcacatgatgcaggaa
aggaaataggcaggagttcgcagcacacatcgatctggagttgcaaggagaatggatttactcagttcacccctatacaa
accacaaggcccaaacaaaggaatctgtttattggaaaaagtcagaatgaacgtcctgctctggcagactcttttgtaga
agattctcttccccatagacgagcaaaggcaaaaatctctgaaatgtcagagaaactctcccgcaggctgaatgaactgg
atacgatgttaaagcacgctttgggtgaacaaagccgggacgagttgtcagctgatgaggataccctttctcaacacagt
gatagcatcatggactatcgccaaaccaaacaacaatcagatgttcgccgtccaaggaaagcacccagtaggcgacggtc
attttctgcttccccacctccgtctaattatcaaccatcacatgtatctgatagtccaccccagaaggatacagaagagc
cagcacgaagggtgcgaatctgttggcaaaatgaacaggatcaaaggaagttaagaccaaagcatctgagtaaagcttat
gatgaagacctaagagcatatgaagctagcgaaagactggaacttgcaacgataaaagcaaaggctcaggaaatggagca
aaaatacaaagagaacgtgcttaaagaaactccaagaatctcacatgcagcaaagatttattctcgaaaaactatacctc
ggcattccaaactcaaccagaggatttcaagaggagggtttgcgaagccaaaaaaagcagctccaatgaaagtcaaagag
aacgatctcttgcctttactcctcaaagactttcctcacatgaacatttctcatccgacgatgaacaagatgtggcagca
gcagctctcccaaatagagcgattcaagcctcccagagaagggaaccagtggaaactgcagaacgaagtactggaaacac
tgaagaagcacgatctacttgtggatcttcttaagagagagcaggctcacaacagaagattgcaagagtttaggcagcgc
attgagagacagaaatgtacacagaataaaacgagagagagacgccagcagattgcccgagccaaaaaatactatcaaga
ttaccggattcagctgcgtgccaagatgatgaggaccaggacacgggaggaaaggatatttaaacaactgtttgaagaag
ccttggaaattcagaaacaaagattccttgagttgaggtcgtatgccaaggaaaaacgtgctgaacaaaagaggcagtat
caagatgaactgcaatccatggaaaactattataaagatcagtttgcaatgctggctgaagccgtttcagaagaacgtca
agaaatccaaaccagagagcgagcacatgtccagacattaagtaaagtgaaacgtgaactgagatccaagctggagaaag
agattaaagagctgcaggacatgatcacacatgatgatgatgatttgttttttcgagaactagaagctgatcggctgaaa
tccagactcttggtggcttcttttcagtgtaacaagaactatctgtttctttaaaggcctggcatgcttgtatcatatct
atgtggctttttacaaggagaccagaatcaaaaatataaaattagcggtttagtttcctgccccaagaccaagattaagt
tgatgttatgaaaatattgcactgatattttcaaaacaagtggttttaaagactttgtcaataaagattagcttccttac
aatcaca
Transcript IDhabu1_s402966_g24983.t3
Definition-
>habu1_s402966_g24983.t3
cgttttggctgccggcgcggtttttgcgtgaagggtggcggaatggctactgctgcggaaagagattggatcaatgttgc
caatgatcttctgacaaagtgtaacatacatctgcatgttaatagcctctctgactgtggagctgaagtgtttgttcatc
tttatgagtcgatattaggagaaaaagtccctgatttcatagctgttcctacttgccaagaagacaacattcataatgtg
caggcggtgatagattctttggcactggactacttgcagatcagcttatcacatataactggcgagaatattgtgaaagg
agataaggagtctattaggaatctcttggaaatatttgatggcttgcttgaatatcttacggaagaagtcagtgaaactg
cttctcaacaggacgcaggtggtgttaaggtgatggcagaaacagaagtccagcccacggattcaaaggagccagaagat
ggctgtgacatcccagttccctccctagagcaaccctcagctgaaggatcctctcagtcatcagagctgcttgatccgtc
ttgggaggctggtggttcagaatctacaagtgagctcattaagcttggtgacaccgcttatttgttttctctgagaaatg
aagtgttaccagcaggaaaagaagtccccaaaaaggctgcaggatctgaagtatatgcaacttttagagaatcatttggt
ctgtcctccagtggaaaaaaaagtgttatttcagaaaggccagctacagcaaagtccgctcagttgtctcaagagcagtt
gagttccagtgctaagaagcttggggacccaattcgtccagcaattgctttgcagcccccctaccagccttccgtcagtg
gagtctcttatttagctgaaagaaagaatgatactggagaccaggattccccaccacctttatcaccacttaaatctcag
gaaccgccatctactgttcttgcagaaccccctgagcgagaatctcctgttttttcagatggtatccggtcttttccaga
tgctacatcttattttccaactgaaccatcagcaacaggaggtggtgtaactagtgaatcgttgccacaagccagttcac
atgatgcaggaaaggaaataggcaggagttcgcagcacacatcgatctggagttgcaaggagaatggatttactcagttc
acccctatacaaaccacaaggcccaaacaaaggaatctgtttattggaaaaagtcagaatgaacgtcctgctctggcaga
ctcttttgtagaagattctcttccccatagacgagcaaaggcaaaaatctctgaaatgtcagagaaactctcccgcaggc
tgaatgaactggatacgatgttaaagcacgctttgggtgaacaaagccgggacgagttgtcagctgatgaggataccctt
tctcaacacagtgatagcatcatggactatcgccaaaccaaacaacaatcagatgttcgccgtccaaggaaagcacccag
taggcgacggtcattttctgcttccccacctccgtctaattatcaaccatcacatgtatctgatagtccaccccagaagg
atacagaagagccagcacgaagggtgcgaatctgttggcaaaatgaacaggatcaaaggaagttaagaccaaagcatctg
agtaaagcttatgatgaagacctaagagcatatgaagctagcgaaagactggaacttgcaacgataaaagcaaaggctca
ggaaatggagcaaaaatacaaagagaacgtgcttaaagaaactccaagaatctcacatgcagcaaagatttattctcgaa
aaactatacctcggcattccaaactcaaccagaggatttcaagaggagggtttgcgaagccaaaaaaagcagctccaatg
aaagtcaaagagaacgatctcttgcctttactcctcaaagactttcctcacatgaacatttctcatccgacgatgaacaa
gatgtggcagcagcagctctcccaaatagagcgattcaagcctcccagagaagggaaccagtggaaactgcagaacgaag
tactggaaacactgaagaagcacgatctacttgtggatcttcttaagagagagcaggctcacaacagaagattgcaagag
tttaggcagcgcattgagagacagaaatgtacacagaataaaacgagagagagacgccagcagattgcccgagccaaaaa
atactatcaagattaccggattcagctgcgtgccaagatgatgaggaccaggacacgggaggaaaggatatttaaacaac
tgtttgaagaagccttggaaattcagaaacaaagattccttgagttgaggtcgtatgccaaggaaaaacgtgctgaacaa
aagaggcagtatcaagatgaactgcaatccatggaaaactattataaagatcagtttgcaatgctggctgaagccgtttc
agaagaacgtcaagaaatccaaaccagagagcgagcacatgtccagacattaagtaaagtgaaacgtgaactgagatcca
agctggagaaagagattaaagagctgcaggacatgatcacacatgatgatgatgatttgttttttcgagaactagaagct
gatcggctgaaatccagactcttggtggcttcttttcagtgtaacaagaactatctgtttctttaaaggcctggcatgct
tgtatcatatctatgtggctttttacaaggagaccagaatcaaaaatataaaattagcggtttagtttcctgccccaaga
ccaagattaagttgatgttatgaaaatattgcactgatattttcaaaacaagtggttttaaagactttgtcaataaagat
tagcttccttacaatcaca

Protein
Protein IDhabu1_s402966_g24983.t1
Definition-
>habu1_s402966_g24983.t1
MFDWINVANDLLTKCNIHLHVNSLSDCGAEVFVHLYESILGEKVPDFIAVPTCQEDNIHNVQAVIDSLALDYLQISLSHI
TGENIVKGDKESIRNLLEIFDGLLEYLTEEVSETASQQDAGGVKVMAETEVQPTDSKEPEDGCDIPVPSLEQPSAEGSSQ
SSELLDPSWEAGGSESTSELIKLGDTAYLFSLRNEVLPAGKEVPKKAAGSEVYATFRESFGLSSSGKKSVISERPATAKS
AQLSQEQLSSSAKKLGDPIRPAIALQPPYQPSVSGVSYLAERKNDTGDQDSPPPLSPLKSQEPPSTVLAEPPERESPVFS
DGIRSFPDATSYFPTEPSATGGGVTSESLPQASSHDAGKEIGRSSQHTSIWSCKENGFTQFTPIQTTRPKQRNLFIGKSQ
NERPALADSFVEDSLPHRRAKAKISEMSEKLSRRLNELDTMLKHALGEQSRDELSADEDTLSQHSDSIMDYRQTKQQSDV
RRPRKAPSRRRSFSASPPPSNYQPSHVSDSPPQKDTEEPARRVRICWQNEQDQRKLRPKHLSKAYDEDLRAYEASERLEL
ATIKAKAQEMEQKYKENVLKETPRISHAAKIYSRKTIPRHSKLNQRISRGGFAKPKKAAPMKVKENDLLPLLLKDFPHMN
ISHPTMNKMWQQQLSQIERFKPPREGNQWKLQNEVLETLKKHDLLVDLLKREQAHNRRLQEFRQRIERQKCTQNKTRERR
QQIARAKKYYQDYRIQLRAKMMRTRTREERIFKQLFEEALEIQKQRFLELRSYAKEKRAEQKRQYQDELQSMENYYKDQF
AMLAEAVSEERQEIQTRERAHVQTLSKVKRELRSKLEKEIKELQDMITHDDDDLFFRELEADRLKSRLLVASFQCNKNYL
FL
Protein IDhabu1_s402966_g24983.t2
Definition-
>habu1_s402966_g24983.t2
MATAAERDWINVANDLLTKCNIHLHVNSLSDCGAEVFVHLYESILGEKVPDFIAVPTCQEDNIHNVQAVIDSLALDYLQI
SLSHITGENIVKGDKESIRNLLEIFDGLLEYLTEEVSETASQQDAGGVKVMAETEVQPTDSKEPEDGCDIPVPSLEQPSA
EGSSQSSELLDPSWEAGGSESTSELIKLGDTAYLFSLRNEGKEVPKKAAGSEVYATFRESFGLSSSGKKSVISERPATAK
SAQLSQEQLSSSAKKLGDPIRPAIALQPPYQPSVSGVSYLAERKNDTGDQDSPPPLSPLKSQEPPSTVLAEPPERESPVF
SDGIRSFPDATSYFPTEPSATGGGVTSESLPQASSHDAGKEIGRSSQHTSIWSCKENGFTQFTPIQTTRPKQRNLFIGKS
QNERPALADSFVEDSLPHRRAKAKISEMSEKLSRRLNELDTMLKHALGEQSRDELSADEDTLSQHSDSIMDYRQTKQQSD
VRRPRKAPSRRRSFSASPPPSNYQPSHVSDSPPQKDTEEPARRVRICWQNEQDQRKLRPKHLSKAYDEDLRAYEASERLE
LATIKAKAQEMEQKYKENVLKETPRISHAAKIYSRKTIPRHSKLNQRISRGGFAKPKKAAPMKVKENDLLPLLLKDFPHM
NISHPTMNKMWQQQLSQIERFKPPREGNQWKLQNEVLETLKKHDLLVDLLKREQAHNRRLQEFRQRIERQKCTQNKTRER
RQQIARAKKYYQDYRIQLRAKMMRTRTREERIFKQLFEEALEIQKQRFLELRSYAKEKRAEQKRQYQDELQSMENYYKDQ
FAMLAEAVSEERQEIQTRERAHVQTLSKVKRELRSKLEKEIKELQDMITHDDDDLFFRELEADRLKSRLLVASFQCNKNY
LFL
Protein IDhabu1_s402966_g24983.t3
Definition-
>habu1_s402966_g24983.t3
MATAAERDWINVANDLLTKCNIHLHVNSLSDCGAEVFVHLYESILGEKVPDFIAVPTCQEDNIHNVQAVIDSLALDYLQI
SLSHITGENIVKGDKESIRNLLEIFDGLLEYLTEEVSETASQQDAGGVKVMAETEVQPTDSKEPEDGCDIPVPSLEQPSA
EGSSQSSELLDPSWEAGGSESTSELIKLGDTAYLFSLRNEVLPAGKEVPKKAAGSEVYATFRESFGLSSSGKKSVISERP
ATAKSAQLSQEQLSSSAKKLGDPIRPAIALQPPYQPSVSGVSYLAERKNDTGDQDSPPPLSPLKSQEPPSTVLAEPPERE
SPVFSDGIRSFPDATSYFPTEPSATGGGVTSESLPQASSHDAGKEIGRSSQHTSIWSCKENGFTQFTPIQTTRPKQRNLF
IGKSQNERPALADSFVEDSLPHRRAKAKISEMSEKLSRRLNELDTMLKHALGEQSRDELSADEDTLSQHSDSIMDYRQTK
QQSDVRRPRKAPSRRRSFSASPPPSNYQPSHVSDSPPQKDTEEPARRVRICWQNEQDQRKLRPKHLSKAYDEDLRAYEAS
ERLELATIKAKAQEMEQKYKENVLKETPRISHAAKIYSRKTIPRHSKLNQRISRGGFAKPKKAAPMKVKENDLLPLLLKD
FPHMNISHPTMNKMWQQQLSQIERFKPPREGNQWKLQNEVLETLKKHDLLVDLLKREQAHNRRLQEFRQRIERQKCTQNK
TRERRQQIARAKKYYQDYRIQLRAKMMRTRTREERIFKQLFEEALEIQKQRFLELRSYAKEKRAEQKRQYQDELQSMENY
YKDQFAMLAEAVSEERQEIQTRERAHVQTLSKVKRELRSKLEKEIKELQDMITHDDDDLFFRELEADRLKSRLLVASFQC
NKNYLFL

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Okinawa Institute of Science and Technology
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