Gene
| Gene Model ID | habu1_s402966_g24984 |
|---|---|
| Locus | habu1_scaffold402966 : 217846 ... 223847 : + |
| To GenomeBrowser | habu1_scaffold402966:217846..223847 |
| Genes list of scaffold | habu1_scaffold402966 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable atp-dependent rna helicase ddx5 | GO:0003676 GO:0003712 GO:0003724 GO:0005524 GO:0005634 GO:0005667 GO:0045449 GO:1903506 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402966_g24984.t2 | 1 | 1 | DEAD | 114 | 284 | 7.69313e-43 | 145.9 | 1.4013e-45 | 5.5001e-42 | 143.1 |
| habu1_s402966_g24984.t2 | 1 | 1 | Helicase_C | 357 | 431 | 1.7e-26 | 91.8 | 3.0e-29 | 8.9e-26 | 89.5 |
| habu1_s402966_g24984.t2 | 2 | 1 | P68HR | 488 | 521 | 4.6e-19 | 67.8 | 5.3e-16 | 1.6e-12 | 46.9 |
| habu1_s402966_g24984.t2 | 2 | 2 | P68HR | 541 | 569 | 4.6e-19 | 67.8 | 3.4e-11 | 1.0e-07 | 31.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s402966_g24984.t2 | gi|729760065|ref|XP_010576927.1| | PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform X1 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s402966_g24984.t2 | gi|699633848|ref|XP_009893086.1| | PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX5 [Charadrius vociferus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 139.2 |
| Venom grand-1 | 193.9 |
| Pit, infrared sensing | 136.8 |
| Nose | 228.7 |
| Brain-1 | 131.5 |
| Eye | 192.0 |
| fetal fibroblast | 192.9 |
| venom gland-2 | 599.1 |
| Brain-2 | 109.6 |
| Spleen | 71.4 |
| Lung | 44.7 |
| Liver | 44.6 |
| Kidney | 43.4 |
| Pancreas | 30.8 |
| Small intestine | 34.7 |
| Large intestine | 51.3 |
| Stomach | 37.9 |
| heart | 64.8 |
| ovary | 195.6 |
| cheek muscle | 40.2 |
Transcript
| Transcript ID | habu1_s402966_g24984.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g24984.t1 cattcagtcgccctcgtcatcggcatcaatttggcttgcggtcttctcgatccccgcgctgttaaggccgtgttcatcgc cgtcgtcaacatgcctgggtttggtggccctcgttttggaggaagtagagggggatctttaggggggaagaaatttggaa atcctggagaaaagcttaccaagaagaaatggaatctagatgagcttcccaaatttgaaaaaaatttctatcaggaacat cctgatgttgcccggcgtgctatgcaagagattgaacaatatagagcaagcaaagaaatcactgttaaaggccataactg tcccaaaccagttatgaatttttatgaagctaattttcctgcaaatgttatggaagtaatccagagacagaactttacag aaccaactgctattcaggcacaaggctggcctgttgctttgagtggactagatatggttggtgtagcacaaactggatca gggaagacattgtcttatttgttgccagccatagtacatataaatcatcaaccgttcctagagcgaggagatggacctat ttgtctggtgctggcaccaactcgagaattggctcagcaagtgcagcaggtggctgcagaatatggtagagcttgccgtt taaagtctacttgtatttatggaggtgctccaaagggaccacaaatacgtgatctagagagaggtgtggaaatctgcatt gcaacacctggtagactcatagattttttagaagctggcaaaaccaacctacggagatgcacttaccttgttcttgatga agctgacagaatgcttgacatgggatttgaacctcagatccgaaaaattgtcgaacagattagacctgataggcagacac tgatgtggagtgcaacatggcctaaagaagttaggcaacttgcagaagacttcttaaaagaatatgtacacatcaacatt ggggcattggaactaagtgcaaaccacaacattctgcagatagtggatgtatgtcatgatgtagagaaggatgacaagct tattcgattgatggaagaaattatgagtgaaaaagaaaataagacaattgtgtttgtggagaccaaaagaagatgtgatg atctaacaagaaaaatgaggagagatggatggccagcaatgggtatccatggtgataaaagtcagcaggagagagactgg gttttaaatgaattcaaacatgggaaggctcctattctgattgctacagatgttgcctccagaggtctagatgtggaaga tgtgaaatttgtcatcaattatgactacccaaactcctcagaggactatatccaccgaattggacgaactgcccgcagca ccaaaacaggcacagcatacacatttttcacacctaataatataaaacaagtaagcgacctcatctctgtacttcgtgaa gctaatcaagcaatcaaccccaaattgctccagttggttgaagacagaggctcaggtcgttccagaggggaccgacgtga cagatactctgcgggtaaaagaggtggatttggttttagagaaagggaaaactttgaaagaacctatggtgcagtgggca agagagactttggagcaaaagcccagaatggtggctttggtgctcaaagttttggtaacggaactacctttggtaacaac tttggagcagctggcatgcaaggtggatttagggctggcactccagcctatcaaaatggctatgaccagcagtatggaaa taacatggcaaacatgcacagtgcaatgaaccaacaacagtatgcgtaccctgcaactggtggtacgccaatgataggtt atccaatgccagcaaattatacccaataacttagtctatttaaatgtcttgtttttcataattgctctttatattgtgtg ttgagaaaagatagttatttaatatcttatggaacaggcagaaaggtctgcagtgcagcagtaacagtggtgcacttttt tccgctatttaagttgaatattctctacattccttgaatgatttttagttttttgtactagaaaatgcagactgttttca caaagtaaatgtacagtgatttgaaataacagcaacagaaggcattgcatggccttccaataaaggtatttcaaaacaga attttc |
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| Transcript ID | habu1_s402966_g24984.t2 |
| Definition | - |
>habu1_s402966_g24984.t2 cattcagtcgccctcgtcatcggcatcaatttggcttgcggtcttctcgatccccgcgctgttaaggccgtgttcatcgc cgtcgtcaacatgcctgggtattccagtgagagggaccgcgggtttggtggccctcgttttggaggaagtagagggggat ctttaggggggaagaaatttggaaatcctggagaaaagcttaccaagaagaaatggaatctagatgagcttcccaaattt gaaaaaaatttctatcaggaacatcctgatgttgcccggcgtgctatgcaagagattgaacaatatagagcaagcaaaga aatcactgttaaaggccataactgtcccaaaccagttatgaatttttatgaagctaattttcctgcaaatgttatggaag taatccagagacagaactttacagaaccaactgctattcaggcacaaggctggcctgttgctttgagtggactagatatg gttggtgtagcacaaactggatcagggaagacattgtcttatttgttgccagccatagtacatataaatcatcaaccgtt cctagagcgaggagatggacctatttgtctggtgctggcaccaactcgagaattggctcagcaagtgcagcaggtggctg cagaatatggtagagcttgccgtttaaagtctacttgtatttatggaggtgctccaaagggaccacaaatacgtgatcta gagagaggtgtggaaatctgcattgcaacacctggtagactcatagattttttagaagctggcaaaaccaacctacggag atgcacttaccttgttcttgatgaagctgacagaatgcttgacatgggatttgaacctcagatccgaaaaattgtcgaac agattagacctgataggcagacactgatgtggagtgcaacatggcctaaagaagttaggcaacttgcagaagacttctta aaagaatatgtacacatcaacattggggcattggaactaagtgcaaaccacaacattctgcagatagtggatgtatgtca tgatgtagagaaggatgacaagcttattcgattgatggaagaaattatgagtgaaaaagaaaataagacaattgtgtttg tggagaccaaaagaagatgtgatgatctaacaagaaaaatgaggagagatggatggccagcaatgggtatccatggtgat aaaagtcagcaggagagagactgggttttaaatgaattcaaacatgggaaggctcctattctgattgctacagatgttgc ctccagaggtctagatgtggaagatgtgaaatttgtcatcaattatgactacccaaactcctcagaggactatatccacc gaattggacgaactgcccgcagcaccaaaacaggcacagcatacacatttttcacacctaataatataaaacaagtaagc gacctcatctctgtacttcgtgaagctaatcaagcaatcaaccccaaattgctccagttggttgaagacagaggctcagg tcgttccagaggggaccgacgtgacagatactctgcgggtaaaagaggtggatttggttttagagaaagggaaaactttg aaagaacctatggtgcagtgggcaagagagactttggagcaaaagcccagaatggtggctttggtgctcaaagttttggt aacggaactacctttggtaacaactttggagcagctggcatgcaaggtggatttagggctggcactccagcctatcaaaa tggctatgaccagcagtatggaaataacatggcaaacatgcacagtgcaatgaaccaacaacagtatgcgtaccctgcaa ctggtggtacgccaatgataggttatccaatgccagcaaattatacccaataacttagtctatttaaatgtcttgttttt cataattgctctttatattgtgtgttgagaaaagatagttatttaatatcttatggaacaggcagaaaggtctgcagtgc agcagtaacagtggtgcacttttttccgctatttaagttgaatattctctacattccttgaatgatttttagttttttgt actagaaaatgcagactgttttcacaaagtaaatgtacagtgatttgaaataacagcaacagaaggcattgcatggcctt ccaataaaggtatttcaaaacagaattttc |
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Protein
| Protein ID | habu1_s402966_g24984.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g24984.t1 MPGFGGPRFGGSRGGSLGGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVARRAMQEIEQYRASKEITVKGHNCPKP VMNFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLV LAPTRELAQQVQQVAAEYGRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADR MLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRL MEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKF VINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGDRRDRYS AGKRGGFGFRERENFERTYGAVGKRDFGAKAQNGGFGAQSFGNGTTFGNNFGAAGMQGGFRAGTPAYQNGYDQQYGNNMA NMHSAMNQQQYAYPATGGTPMIGYPMPANYTQ |
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| Protein ID | habu1_s402966_g24984.t2 |
| Definition | - |
>habu1_s402966_g24984.t2 MPGYSSERDRGFGGPRFGGSRGGSLGGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVARRAMQEIEQYRASKEITV KGHNCPKPVMNFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER GDGPICLVLAPTRELAQQVQQVAAEYGRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY LVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVE KDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRG LDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSR GDRRDRYSAGKRGGFGFRERENFERTYGAVGKRDFGAKAQNGGFGAQSFGNGTTFGNNFGAAGMQGGFRAGTPAYQNGYD QQYGNNMANMHSAMNQQQYAYPATGGTPMIGYPMPANYTQ |
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