Gene
| Gene Model ID | habu1_s402966_g24987 |
|---|---|
| Locus | habu1_scaffold402966 : 278656 ... 329399 : + |
| To GenomeBrowser | habu1_scaffold402966:278656..329399 |
| Genes list of scaffold | habu1_scaffold402966 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402966_g24987.t1 | 5 | 1 | Ig_2 | 86 | 183 | 1.69557e-43 | 146.5 | 6.5e-08 | 0.00016 | 21.7 |
| habu1_s402966_g24987.t1 | 5 | 2 | Ig_2 | 193 | 266 | 1.69557e-43 | 146.5 | 2.2e-10 | 5.5e-07 | 29.6 |
| habu1_s402966_g24987.t1 | 5 | 3 | Ig_2 | 279 | 356 | 1.69557e-43 | 146.5 | 5.2e-11 | 1.3e-07 | 31.6 |
| habu1_s402966_g24987.t1 | 5 | 4 | Ig_2 | 371 | 450 | 1.69557e-43 | 146.5 | 2.4e-09 | 5.8e-06 | 26.3 |
| habu1_s402966_g24987.t1 | 5 | 5 | Ig_2 | 462 | 535 | 1.69557e-43 | 146.5 | 5.9e-08 | 0.00015 | 21.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s402966_g24987.t1 | gi|602650018|ref|XP_007431407.1| | PREDICTED: platelet endothelial cell adhesion molecule [Python bivittatus] | 0.0 |
| habu1_s402966_g24987.t1 | gi|637381414|ref|XP_008123855.1| | PREDICTED: platelet endothelial cell adhesion molecule-like [Anolis carolinensis] | 0.0 |
| habu1_s402966_g24987.t1 | gi|530578040|ref|XP_005282957.1| | PREDICTED: platelet endothelial cell adhesion molecule isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s402966_g24987.t1 | gi|558171813|ref|XP_006125236.1| | PREDICTED: platelet endothelial cell adhesion molecule isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s402966_g24987.t1 | gi|591360551|ref|XP_007055194.1| | PREDICTED: platelet endothelial cell adhesion molecule [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.7 |
| Venom grand-1 | 5.4 |
| Pit, infrared sensing | 9.4 |
| Nose | 2.7 |
| Brain-1 | 3.9 |
| Eye | 5.1 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 3.0 |
| Brain-2 | 3.8 |
| Spleen | 15.7 |
| Lung | 97.8 |
| Liver | 1.3 |
| Kidney | 4.5 |
| Pancreas | 3.4 |
| Small intestine | 4.1 |
| Large intestine | 9.0 |
| Stomach | 5.4 |
| heart | 32.1 |
| ovary | 1.1 |
| cheek muscle | 9.4 |
Transcript
| Transcript ID | habu1_s402966_g24987.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g24987.t1 ccaactggtcgtaagtcgaggactttacctgcccgggagcgccgcacatgcgtggttccgccccctgcgccggccgaggc gtagctggcaagcagcagagacggagcaggccgaccaccagctggcccagcccaagggaggatggtgaccttctgttcac taacacaattgaacaagacagcgcccagtatacaatctctcaggctagattttcttcttcaggagactatgaatgttcat taagtgttgaggagaaaaaaaaatctagtgatcctttgaccattaaagttgaaggcataatgaagccaatattgagtgtc caaagaacagcagtgatggaaggtgaaaatgtacttttacgctgtgaggtgccagaagaaaagccacctttttatttcac attttataaaactgcacagttggcaaatggagttgtacatgagaggaaacgaggatcgcaacgtgaaaattttgttgagt tagaattccccatcgatgctggagacaatattttatattttgaatgtgctgtccagatgaattcaatgacaggacctcaa atctcagagcgtagtaaccgaacaattgtcaccgttaccgaaccattttctgttcctaaaataaccatcgacccaccaaa gaatattaccgaaggggataagatatgtataacatgttcgacagtcctacttcgccaggatcaaactgaaattatcttgc agaaaaacaaaacaattctgaacagcacgaagggcagagagaccctaacctattgcaagatagtcaagatggaagacaat ggcaaatatatgtgcaaagtggagcatggaagtgtatctaaaactgacaaggaagaacttgtagtggctgaactgttttc caaaccaatattagtggttaataaaaccagctgggatgaaaacagcattgtacaaattcagtgtcaagtgaacggtccaa tgccgatcagtctctcgctcatgaaggacaacaaaatattggccaactccagcacttacttggctgagctccatgtatct gacactggaatctatatgtgtagagcagagataaacaacatttccaaggaaagtgacccagtatttctccgtgttcacgc tccagtttctctgcctgtcctttatcaaccagtttcccaaatagctgtactggagaagttctttgtcttacaatgctact caaggtttgggactctgcctatcacatataccctttacagagggaatatacttatcaggaagattgtgaccagagcaaac ataccagcaaactttacggtcaaagcgactagcatccacgagtctggacaatacagatgccatgctaacaacggccactc tctttcgcaacaaagcaaaagactaaatgtcacaataatagctccagttgttaacataacttttgaaagagaaccacagg agaacatagaagatggcaatgaactcttatttttctgctcggttaaatcaggatccttccctgttgagttccactttttt aaagagaatgacgccaaatcgttacatcatgtcacagaaaataaaaagctatcagttatttggcacaaacgaagcttcac aagccaggacgaagggagttacttctgcagagctgacaaccaagcaaactcttttgtggaaagccagaagatcctgatca aggttgtcatggcttcgtggaagaaaggacttattgtagccacaatcctcctgatttttcttgctgctataattacaatc gtttggttgaattgtcgtttgaaagcaaaggcgaaaaacatttctacggagttgtctgtatccaaaagagcaaccaattc agtgggtgggaaactgacaacaggacacaataatgaaggagaattctattacggttcggggcataatgaagacggcgaaa aaaatcacatcagtgcaaaagaggataatagaggatctgaccttgaggctccagaagtggaatatacggaagtacaagta tcagtgcctgacccttatcgagctcctgtaatgaataatgagacagtttatactgaaatcagaaaaactattaatgatgc tgaggagaacagacattctagaatagaaccttctcctgatgggacttaggaaaagatcaattcatattttattagtgttt aggaacaagcacatatacacactccaacataacaaagaaaagtgcatgaataaatcctaatgtaccataaagtcaa |
|
Protein
| Protein ID | habu1_s402966_g24987.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g24987.t1 MRGSAPCAGRGVAGKQQRRSRPTTSWPSPREDGDLLFTNTIEQDSAQYTISQARFSSSGDYECSLSVEEKKKSSDPLTIK VEGIMKPILSVQRTAVMEGENVLLRCEVPEEKPPFYFTFYKTAQLANGVVHERKRGSQRENFVELEFPIDAGDNILYFEC AVQMNSMTGPQISERSNRTIVTVTEPFSVPKITIDPPKNITEGDKICITCSTVLLRQDQTEIILQKNKTILNSTKGRETL TYCKIVKMEDNGKYMCKVEHGSVSKTDKEELVVAELFSKPILVVNKTSWDENSIVQIQCQVNGPMPISLSLMKDNKILAN SSTYLAELHVSDTGIYMCRAEINNISKESDPVFLRVHAPVSLPVLYQPVSQIAVLEKFFVLQCYSRFGTLPITYTLYRGN ILIRKIVTRANIPANFTVKATSIHESGQYRCHANNGHSLSQQSKRLNVTIIAPVVNITFEREPQENIEDGNELLFFCSVK SGSFPVEFHFFKENDAKSLHHVTENKKLSVIWHKRSFTSQDEGSYFCRADNQANSFVESQKILIKVVMASWKKGLIVATI LLIFLAAIITIVWLNCRLKAKAKNISTELSVSKRATNSVGGKLTTGHNNEGEFYYGSGHNEDGEKNHISAKEDNRGSDLE APEVEYTEVQVSVPDPYRAPVMNNETVYTEIRKTINDAEENRHSRIEPSPDGT |
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