Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s402966_g24989
Locus habu1_scaffold402966 : 476630 ... 550600 : +
To GenomeBrowser habu1_scaffold402966:476630..550600
Genes list of scaffold habu1_scaffold402966

Annotation by Blast2GO
Annotation GO
serine threonine-protein kinase endoribonuclease ire1 EC:2.7.11.0 GO:0000287 GO:0004521 GO:0004674 GO:0005524 GO:0005637 GO:0005739 GO:0006987 GO:0007050 GO:0009069 GO:0019899 GO:0030176 GO:0042802 GO:0046777 GO:0051252 GO:0070055 GO:0070059 GO:0090502 GO:1900103

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s402966_g24989.t2 1 1 PQQ_2 43 214 5.1e-07 29.3 2.1e-07 0.00039 19.9
habu1_s402966_g24989.t2 1 1 Pkinase 603 861 0.0 158.1 0.0 0.0 157.6
habu1_s402966_g24989.t2 1 1 Pkinase_Tyr 604 855 6.8e-27 94.1 5.6e-30 1.0e-26 93.5
habu1_s402966_g24989.t2 1 1 Ribonuc_2-5A 866 991 2.10195e-44 150.4 0.0 4.06377e-44 149.5

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 5.0
Venom grand-1 11.3
Pit, infrared sensing 4.8
Nose 8.9
Brain-1 2.1
Eye 3.7
fetal fibroblast 2.2
venom gland-2 27.5
Brain-2 1.8
Spleen 7.9
Lung 4.0
Liver 5.0
Kidney 3.1
Pancreas 24.5
Small intestine 6.1
Large intestine 5.1
Stomach 5.8
heart 2.1
ovary 0.4
cheek muscle 3.0

Transcript
Transcript IDhabu1_s402966_g24989.t1
Definition-
>habu1_s402966_g24989.t1
ggcccggtgctggttgcgagggcgagccatggagcggggggcgcgggagcgctcggctggcggtcgcggtctcctccggc
tgggcgcgctgctgctgctgctactcctgccggggcccgggagctgtggaaatgccaattcagtgactttgccagagaca
ttattgttcgtttcaactcttgatgggagtttacatgcagtcagcaagagaacagggtcaattaaatggactttaaagga
agatcctgtacttcaggtgccactgcacatggaagatcctagaccagcatttcttcctgatcctaatgatggaagtctct
acactcttggtggcaagaataatgaaggcttaactaaactgccattcaccatcccagagcttgtccaggcttccccttgc
cgcagttccgatggaattctatacatggggaagaagcaggacagctggtatgtagtagaccttgcaacaggagaaaaaca
gcagactttaacctcttcatttgctgaaagcttgtgcccatctacctcactgctgtatcttggtcgaacagagtatacca
tcaccatgtacgacaccaagagtaaggaactccgctggaatgccacctacttcaattacgcggcaacattgcctgatgaa
gacgcccaatataaaatgtctcactttgcatctaatggagatggactagtggtgaccgtggacagtgagtcgggcgatgt
cttgtggatccagaattacggctcccctgttgtagctttttacatctggcagcgggaaggcttatggaaagtgatgcaca
ccaacgtgggagtagaaaccctgcgctacttgacgttcatgtccggtgaagttgggcgcatcactaagtggaaatatcca
tttcccaaagaaacggaggccaaaagcaaactaatgccaaccctttatgtagggaaatactctaccggcttatatgcttc
gccatcgatggtacacgaaggagtggctattatgcctcggggaagtcccattccattgatagaaggccccaaaatacaag
ggatcaccattgaagaatgtgtgatcaccccaagtacagatctaaggtttcagcctggattcaaatcaaagaaaggactc
cattttctgaggaaccactggcttttaatagggcatcatgagaccccattatcagcctcaaccaggatcctggagaaatt
tccaagcaacttgccaaaacgtcaggaaaatgtgatcccggcagattcagacaaaaaagtttttgaagaggcaattaata
tggccggcagtcccgggaagaatttgcggcaccctgttccagagacagctgcagagacaaccagccaaaccacgacccga
ccagaggctccagtggattccatcttgaaggactttgccaccgttctcttgagcactttcctgcttgttggctgggtagc
ctttgttattacctaccccatgaacatgcaccatcagcaacagcaccaacagttccagaaacagatagaagagaagctac
agttgttgaagcaacagcctttcagacctcccatagatcttcctcctgaggcagaacttctggaaggttcttgtgtcagg
caagatggctcagccaccagttcaccaagtatgtcgccgaagacgtcaaaccactctgcgtactccaatctctctgcctc
tgatgttggaagctgcctttccaccgaacctgaaggagatggaaagtcaggcaccattgtggttggaaagatttcattca
atccgaaggatgtccttggacatggagccgagggaacaattgtttacaggggcacgtttgacaacagagatgttgcggtg
aagagaattctccccgaatgtttcagttttgctgaccgggaggtccagctgctccgtgaatctgatgaacaccctaatgt
aatccgctatttctgcacagagcgggaccgccagttccagtacattgctctggaactctgcgctgccaccttgcaggagt
atttggaacagaaggactttggcaatcacggcttgcagccaatcaccctcttacagcagaccatgtctggtctggcttat
cttcactctctcaacatagtccacagagacttgaagccccacaacatcctcatctctatgccgaacgcccatggcaaagt
aaaagccatgatttccgactttggcctctgcaagaagcttgcagttggcaggcacagttttagccgccggtctggagttc
caggcaccgaaggttggattgctccagagatactgagtgaggactgcaaagagaatccaacccacacagtggatattttt
tcagctggctgtgttttctactatgtggtatcggaaggcaaccatccgtttggcaaatccctgcagcggcaagccaacat
tttactgggcgcatacagtctggattgcctaaatttagagatccatgaggacattgttgcacgtgacttgatggagcaaa
tgataaatatggatccccagaaacggccttcggctaattgtgtcctgaagcacccttttttctggagcctagagaagcag
cttcaatttttccaggatgtgagtgaccggatagaaaaagaatctctagatggtccgatagtgaaggagctggagagagg
aggaagagctgtggtgaagatggactggagagagcacataaccgtcccgctacagacagatcttcgaaaattccggtcct
ataaagggggctcagtaagagatctcttgcgggcaatgaggaacaagaaacatcactatcgagaattgcctcccgaggta
caggagactctgggatctgtcccagatgattttgtggcctactttacttcgcgttttcctcatctcctgctgcacactta
caatgctatgcgcatctgctgcctggaaagactgtttcagccttattacatgcagaactcggccaggcagctgtttttgg
gagatgctgcttgacggttggagttgtcttgcatatcacagggccgagcaatcggcctgccttagcagggtgacttgaca
gactgcaaaagagtgaaccaaaccaaaccaaactcttttgagacacagacttctcaaacgtgccttgtactctgactgct
ctgactcaggaagaaaattccaggttgaatttgaatcaaaaggagacggaacggtaccaggatccaggtctctaaagcag
gagcagtcaaaaggaattcccaagaggaaaaacgagttctatttgtacaggacttttatatttcttctgaataagagctt
catacaaatcaagaataaaagtagattttgaaacagttgta
Transcript IDhabu1_s402966_g24989.t2
Definition-
>habu1_s402966_g24989.t2
ggcccggtgctggttgcgagggcgagccatggagcggggggcgcgggagcgctcggctggcggtcgcggtctcctccggc
tgggcgcgctgctgctgctgctactcctgccggggcccgggagctgtggaaatgccaattcagtgactttgccagagaca
ttattgttcgtttcaactcttgatgggagtttacatgcagtcagcaagagaacagggtcaattaaatggactttaaagga
agatcctgtacttcaggtgccactgcacatggaagatcctagaccagcatttcttcctgatcctaatgatggaagtctct
acactcttggtggcaagaataatgaaggcttaactttgtttctgttccaatcagcaaaccagatccccggtactgaagtt
gtaaatttctctacatgttctgagaaactgccattcaccatcccagagcttgtccaggcttccccttgccgcagttccga
tggaattctatacatggggaagaagcaggacagctggtatgtagtagaccttgcaacaggagaaaaacagcagactttaa
cctcttcatttgctgaaagcttgtgcccatctacctcactgctgtatcttggtcgaacagagtataccatcaccatgtac
gacaccaagagtaaggaactccgctggaatgccacctacttcaattacgcggcaacattgcctgatgaagacgcccaata
taaaatgtctcactttgcatctaatggagatggactagtggtgaccgtggacagtgagtcgggcgatgtcttgtggatcc
agaattacggctcccctgttgtagctttttacatctggcagcgggaaggcttatggaaagtgatgcacaccaacgtggga
gtagaaaccctgcgctacttgacgttcatgtccggtgaagttgggcgcatcactaagtggaaatatccatttcccaaaga
aacggaggccaaaagcaaactaatgccaaccctttatgtagggaaatactctaccggcttatatgcttcgccatcgatgg
tacacgaaggagtggctattatgcctcggggaagtcccattccattgatagaaggccccaaaatacaagggatcaccatt
gaagaatgtgtgatcaccccaagtacagatctaaggtttcagcctggattcaaatcaaagaaaggactccattttctgag
gaaccactggcttttaatagggcatcatgagaccccattatcagcctcaaccaggatcctggagaaatttccaagcaact
tgccaaaacgtcaggaaaatgtgatcccggcagattcagacaaaaaagtttttgaagaggcaattaatatggccggcagt
cccgggaagaatttgcggcaccctgttccagagacagctgcagagacaaccagccaaaccacgacccgaccagaggctcc
agtggattccatcttgaaggactttgccaccgttctcttgagcactttcctgcttgttggctgggtagcctttgttatta
cctaccccatgaacatgcaccatcagcaacagcaccaacagttccagaaacagatagaagagaagctacagttgttgaag
caacagcctttcagacctcccatagatcttcctcctgaggcagaacttctggaaggttcttgtgtcaggcaagatggctc
agccaccagttcaccaagtatgtcgccgaagacgtcaaaccactctgcgtactccaatctctctgcctctgatgttggaa
gctgcctttccaccgaacctgaaggagatggaaagtcaggcaccattgtggttggaaagatttcattcaatccgaaggat
gtccttggacatggagccgagggaacaattgtttacaggggcacgtttgacaacagagatgttgcggtgaagagaattct
ccccgaatgtttcagttttgctgaccgggaggtccagctgctccgtgaatctgatgaacaccctaatgtaatccgctatt
tctgcacagagcgggaccgccagttccagtacattgctctggaactctgcgctgccaccttgcaggagtatttggaacag
aaggactttggcaatcacggcttgcagccaatcaccctcttacagcagaccatgtctggtctggcttatcttcactctct
caacatagtccacagagacttgaagccccacaacatcctcatctctatgccgaacgcccatggcaaagtaaaagccatga
tttccgactttggcctctgcaagaagcttgcagttggcaggcacagttttagccgccggtctggagttccaggcaccgaa
ggttggattgctccagagatactgagtgaggactgcaaagagaatccaacccacacagtggatattttttcagctggctg
tgttttctactatgtggtatcggaaggcaaccatccgtttggcaaatccctgcagcggcaagccaacattttactgggcg
catacagtctggattgcctaaatttagagatccatgaggacattgttgcacgtgacttgatggagcaaatgataaatatg
gatccccagaaacggccttcggctaattgtgtcctgaagcacccttttttctggagcctagagaagcagcttcaattttt
ccaggatgtgagtgaccggatagaaaaagaatctctagatggtccgatagtgaaggagctggagagaggaggaagagctg
tggtgaagatggactggagagagcacataaccgtcccgctacagacagatcttcgaaaattccggtcctataaagggggc
tcagtaagagatctcttgcgggcaatgaggaacaagaaacatcactatcgagaattgcctcccgaggtacaggagactct
gggatctgtcccagatgattttgtggcctactttacttcgcgttttcctcatctcctgctgcacacttacaatgctatgc
gcatctgctgcctggaaagactgtttcagccttattacatgcagaactcggccaggcagctgtttttgggagatgctgct
tgacggttggagttgtcttgcatatcacagggccgagcaatcggcctgccttagcagggtgacttgacagactgcaaaag
agtgaaccaaaccaaaccaaactcttttgagacacagacttctcaaacgtgccttgtactctgactgctctgactcagga
agaaaattccaggttgaatttgaatcaaaaggagacggaacggtaccaggatccaggtctctaaagcaggagcagtcaaa
aggaattcccaagaggaaaaacgagttctatttgtacaggacttttatatttcttctgaataagagcttcatacaaatca
agaataaaagtagattttgaaacagttgta

Protein
Protein IDhabu1_s402966_g24989.t1
Definition-
>habu1_s402966_g24989.t1
MERGARERSAGGRGLLRLGALLLLLLLPGPGSCGNANSVTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPLH
MEDPRPAFLPDPNDGSLYTLGGKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDSWYVVDLATGEKQQTLTSSFAE
SLCPSTSLLYLGRTEYTITMYDTKSKELRWNATYFNYAATLPDEDAQYKMSHFASNGDGLVVTVDSESGDVLWIQNYGSP
VVAFYIWQREGLWKVMHTNVGVETLRYLTFMSGEVGRITKWKYPFPKETEAKSKLMPTLYVGKYSTGLYASPSMVHEGVA
IMPRGSPIPLIEGPKIQGITIEECVITPSTDLRFQPGFKSKKGLHFLRNHWLLIGHHETPLSASTRILEKFPSNLPKRQE
NVIPADSDKKVFEEAINMAGSPGKNLRHPVPETAAETTSQTTTRPEAPVDSILKDFATVLLSTFLLVGWVAFVITYPMNM
HHQQQHQQFQKQIEEKLQLLKQQPFRPPIDLPPEAELLEGSCVRQDGSATSSPSMSPKTSNHSAYSNLSASDVGSCLSTE
PEGDGKSGTIVVGKISFNPKDVLGHGAEGTIVYRGTFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTERD
RQFQYIALELCAATLQEYLEQKDFGNHGLQPITLLQQTMSGLAYLHSLNIVHRDLKPHNILISMPNAHGKVKAMISDFGL
CKKLAVGRHSFSRRSGVPGTEGWIAPEILSEDCKENPTHTVDIFSAGCVFYYVVSEGNHPFGKSLQRQANILLGAYSLDC
LNLEIHEDIVARDLMEQMINMDPQKRPSANCVLKHPFFWSLEKQLQFFQDVSDRIEKESLDGPIVKELERGGRAVVKMDW
REHITVPLQTDLRKFRSYKGGSVRDLLRAMRNKKHHYRELPPEVQETLGSVPDDFVAYFTSRFPHLLLHTYNAMRICCLE
RLFQPYYMQNSARQLFLGDAA
Protein IDhabu1_s402966_g24989.t2
Definition-
>habu1_s402966_g24989.t2
MERGARERSAGGRGLLRLGALLLLLLLPGPGSCGNANSVTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPLH
MEDPRPAFLPDPNDGSLYTLGGKNNEGLTLFLFQSANQIPGTEVVNFSTCSEKLPFTIPELVQASPCRSSDGILYMGKKQ
DSWYVVDLATGEKQQTLTSSFAESLCPSTSLLYLGRTEYTITMYDTKSKELRWNATYFNYAATLPDEDAQYKMSHFASNG
DGLVVTVDSESGDVLWIQNYGSPVVAFYIWQREGLWKVMHTNVGVETLRYLTFMSGEVGRITKWKYPFPKETEAKSKLMP
TLYVGKYSTGLYASPSMVHEGVAIMPRGSPIPLIEGPKIQGITIEECVITPSTDLRFQPGFKSKKGLHFLRNHWLLIGHH
ETPLSASTRILEKFPSNLPKRQENVIPADSDKKVFEEAINMAGSPGKNLRHPVPETAAETTSQTTTRPEAPVDSILKDFA
TVLLSTFLLVGWVAFVITYPMNMHHQQQHQQFQKQIEEKLQLLKQQPFRPPIDLPPEAELLEGSCVRQDGSATSSPSMSP
KTSNHSAYSNLSASDVGSCLSTEPEGDGKSGTIVVGKISFNPKDVLGHGAEGTIVYRGTFDNRDVAVKRILPECFSFADR
EVQLLRESDEHPNVIRYFCTERDRQFQYIALELCAATLQEYLEQKDFGNHGLQPITLLQQTMSGLAYLHSLNIVHRDLKP
HNILISMPNAHGKVKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEILSEDCKENPTHTVDIFSAGCVFYYVVSEG
NHPFGKSLQRQANILLGAYSLDCLNLEIHEDIVARDLMEQMINMDPQKRPSANCVLKHPFFWSLEKQLQFFQDVSDRIEK
ESLDGPIVKELERGGRAVVKMDWREHITVPLQTDLRKFRSYKGGSVRDLLRAMRNKKHHYRELPPEVQETLGSVPDDFVA
YFTSRFPHLLLHTYNAMRICCLERLFQPYYMQNSARQLFLGDAA

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