Gene
| Gene Model ID | habu1_s402966_g24993 |
|---|---|
| Locus | habu1_scaffold402966 : 710021 ... 713709 : - |
| To GenomeBrowser | habu1_scaffold402966:710021..713709 |
| Genes list of scaffold | habu1_scaffold402966 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 40s ribosomal protein s26 | GO:0003729 GO:0003735 GO:0005730 GO:0006412 GO:0016020 GO:0022627 GO:0033119 GO:0042254 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402966_g24993.t1 | 1 | 1 | Ribosomal_S26e | 1 | 105 | 0.0 | 179.1 | 0.0 | 0.0 | 179.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s402966_g24993.t1 | gi|635040021|ref|XP_007995529.1| | PREDICTED: 40S ribosomal protein S26-like [Chlorocebus sabaeus] | 0.0 |
| habu1_s402966_g24993.t1 | gi|557324478|ref|XP_006035273.1| | PREDICTED: 40S ribosomal protein S26 [Alligator sinensis] | 0.0 |
| habu1_s402966_g24993.t1 | gi|350538821|ref|NP_001232588.1| | 40S ribosomal protein S26 [Taeniopygia guttata] | 0.0 |
| habu1_s402966_g24993.t1 | gi|564315719|ref|XP_003752685.2| | PREDICTED: 40S ribosomal protein S26-like [Rattus norvegicus] | 0.0 |
| habu1_s402966_g24993.t1 | gi|6981488|ref|NP_037356.1| | 40S ribosomal protein S26 [Rattus norvegicus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 575.5 |
| Venom grand-1 | 2457.1 |
| Pit, infrared sensing | 1019.6 |
| Nose | 601.1 |
| Brain-1 | 190.7 |
| Eye | 494.9 |
| fetal fibroblast | 810.8 |
| venom gland-2 | 1312.6 |
| Brain-2 | 132.6 |
| Spleen | 805.1 |
| Lung | 777.6 |
| Liver | 1460.1 |
| Kidney | 1132.4 |
| Pancreas | 1541.2 |
| Small intestine | 1144.1 |
| Large intestine | 779.6 |
| Stomach | 1031.9 |
| heart | 628.5 |
| ovary | 302.4 |
| cheek muscle | 797.6 |
Transcript
| Transcript ID | habu1_s402966_g24993.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g24993.t1 aaagcaatataaaaaacccaaggaaaaagccggatcctctttcgcctcctcaccgtcaaaatgacaaggaagagaagaaa caatggccgcgccaagaaaggccgaggacatgtccagcctatacgctgtaccaactgtgcccgttgtgtccccaaggata aagctattaagaagtttgtcatccgaaatattgtagaagcagctgcagtccgagatatttctgaagcgagtgtctttgat tcctatgtgctacccaaactctatgtgaagcttcactattgtgttagctgtgctatccacagcaaggtggtgaggaaccg atcccgtgaggcccggaaggaccgcactcctcctccccggttcaggccagcaggtgctgcaccgagaccaccccctaagc ctatgtaaggagatgttttaaaagatgtcaatgccaaatattgagtcaataaatacattttacaagtgatgattgtttgt gttaaccctagagtgtttttaaaggtgtgggtcttaaaaaatggtagggatacaagaataataaataccttttagatatg ctccaaa |
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Protein
| Protein ID | habu1_s402966_g24993.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g24993.t1 MTRKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDSYVLPKLYVKLHYCVSCAIH SKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM |
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