Gene
| Gene Model ID | habu1_s402966_g24998 |
|---|---|
| Locus | habu1_scaffold402966 : 880240 ... 888559 : - |
| To GenomeBrowser | habu1_scaffold402966:880240..888559 |
| Genes list of scaffold | habu1_scaffold402966 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin-dependent kinase 2 | EC:2.7.11.22 GO:0000074 GO:0000082 GO:0000307 GO:0000781 GO:0000793 GO:0000805 GO:0000806 GO:0004693 GO:0005524 GO:0005667 GO:0005768 GO:0006813 GO:0007265 GO:0008284 GO:0009069 GO:0015030 GO:0016572 GO:0030332 GO:0032298 GO:0035173 GO:0045893 GO:0051726 GO:0060968 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402966_g24998.t1 | 1 | 1 | Pkinase | 4 | 287 | 0.0 | 271.2 | 0.0 | 0.0 | 271.0 |
| habu1_s402966_g24998.t1 | 1 | 1 | Pkinase_Tyr | 6 | 200 | 9.7e-36 | 123.1 | 4.6e-39 | 1.4e-35 | 122.6 |
| habu1_s402966_g24998.t1 | 1 | 1 | Kinase-like | 85 | 275 | 3.6e-06 | 26.1 | 4.4e-08 | 0.00013 | 21.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s402966_g24998.t1 | gi|602640517|ref|XP_007427068.1| | PREDICTED: cyclin-dependent kinase 2 [Python bivittatus] | 0.0 |
| habu1_s402966_g24998.t1 | gi|637320249|ref|XP_008112629.1| | PREDICTED: cyclin-dependent kinase 2 [Anolis carolinensis] | 0.0 |
| habu1_s402966_g24998.t1 | gi|530649221|ref|XP_005311130.1| | PREDICTED: cyclin-dependent kinase 2 [Chrysemys picta bellii] | 0.0 |
| habu1_s402966_g24998.t1 | gi|564257552|ref|XP_006267726.1| | PREDICTED: cyclin-dependent kinase 2 [Alligator mississippiensis] | 0.0 |
| habu1_s402966_g24998.t1 | gi|586457478|ref|XP_006859466.1| | PREDICTED: cyclin-dependent kinase 2 isoform X1 [Chrysochloris asiatica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.3 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 2.3 |
| Nose | 0.7 |
| Brain-1 | 0.1 |
| Eye | 0.1 |
| fetal fibroblast | 11.6 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 0.9 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.3 |
| Large intestine | 0.2 |
| Stomach | 0.2 |
| heart | 0.1 |
| ovary | 19.6 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s402966_g24998.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g24998.t1 ttttgcttggctcttgcggaccaccgcctctccttcctgctctgtgccggcgagtactttcggggcaaactgggatcctt cccagcccgcgtctcctccgatggagaacttccagaaagtggagaagatcggggaaggcacctacggcgtggtctataaa gcaaagaacaaagtcaccggcgaggtggtcgcgcttaaaaaaatccgcttggacacggagacagaaggagttcccagtac tgccatccgagagatttctctcttaaaggaattgaaccatcccaacatagtcaaattgttggatgtaatccatactgaga acaaactctatttggtctttgagttcttacatcaagatctaaagaaattcatggattcttctacttccatcagtggtgta gagttacctcttatcaagagctatctgttccagctgctgcagggtcttgccttttgccattcccatcgtgtcctccaccg agatcttaaaccgcagaacctcctcatcaatgcagagggagcaataaaacttgctgactttgggctagcacgtgcatttg gcgtgcccgtgagaacctacacgcatgaggtggtgactctttggtatcgagctccagaaattctccttggctgcaaatac tactcaacagcagtggatatatggagccttggatgcatctttgcagagatgttaacccgtagagctctcttccctgggga ctcagaaattgaccagctatttcgcatcttccgcacactgggcactccggatgagaccgtgtggccaggagtcacctcta tgcctgactataagtccagtttccccaagtgggcccggcaggacttcagcaaagtagtaccgccgctggatgaagaaggc agaaaacttctagcactaatgctgcattatgatcccaacaagagaatctcggccaagactgctctcaatcatcccttctt tcgagatgtcacaaaggctttgccacacctccgcttgtgaaatggaactggagccaacagagttgctgcagtgcaggctc tgcaacatgccttttccttgggcagccctagttgcttgcacttaacttttcaacttaaccctggagagaacaccggaggt ccagttggagcgcagcctacacctttaggattttattaaagcactaaactgagtttgaggat |
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Protein
| Protein ID | habu1_s402966_g24998.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g24998.t1 MENFQKVEKIGEGTYGVVYKAKNKVTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF EFLHQDLKKFMDSSTSISGVELPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGAIKLADFGLARAFGVPVRTY THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMLTRRALFPGDSEIDQLFRIFRTLGTPDETVWPGVTSMPDYKSS FPKWARQDFSKVVPPLDEEGRKLLALMLHYDPNKRISAKTALNHPFFRDVTKALPHLRL |
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