Gene
| Gene Model ID | habu1_s402966_g25007 |
|---|---|
| Locus | habu1_scaffold402966 : 1277153 ... 1302602 : - |
| To GenomeBrowser | habu1_scaffold402966:1277153..1302602 |
| Genes list of scaffold | habu1_scaffold402966 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| voltage-dependent l-type calcium channel subunit beta-3 | GO:0005245 GO:0005891 GO:0050852 GO:0070588 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402966_g25007.t2 | 1 | 1 | Guanylate_kin | 59 | 237 | 0.0 | 158.0 | 0.0 | 0.0 | 157.3 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.6 |
| Venom grand-1 | 0.6 |
| Pit, infrared sensing | 3.9 |
| Nose | 3.2 |
| Brain-1 | 28.0 |
| Eye | 5.2 |
| fetal fibroblast | 3.0 |
| venom gland-2 | 0.3 |
| Brain-2 | 18.9 |
| Spleen | 1.7 |
| Lung | 5.7 |
| Liver | 1.0 |
| Kidney | 0.7 |
| Pancreas | 0.9 |
| Small intestine | 0.3 |
| Large intestine | 1.0 |
| Stomach | 2.5 |
| heart | 1.5 |
| ovary | 1.1 |
| cheek muscle | 0.8 |
Transcript
| Transcript ID | habu1_s402966_g25007.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g25007.t1 caatgcaaaaagagtcgcgatatgtcgcgacatgtcacgtgacgtggcgagtttgacacctggctctgctgattcctaca ctagccgcccatcattggactccgacgtgtcgctagaggaggaacgcgaaggtgtgaagcgcgaagtggagaaccaggcc cagcagcagcttgaaaaagccaagagcaaaccagttgcatttgctgtccgtactaatgtcagctactgtggcgcattgga tgaagaatgtcctgtgcagggatctgccatcaactttgaagccaaagacttcttgcatattaaagagaaatacagcaatg actggtggatcgggcggctagtgaaggaggggggagacatcgccttcatccccagcccacagaggctggaggccatacgg ctgaaacaggagcaaaaagccaggcaatctgggaatcctgccatcagcaaccggcgatcgcctcccccatcattagccaa acagaagcaaaagcagacagagcacatccctccatatgatgtggttccttccatgcggccagtggtgctggtggggccct cactgaaaggatacgaggtgacagacatgatgcagaaagctctttttgatttcttgaagcacagatttgatggcagaatc tccatcacgcgtgttacagcagacctgtccctggccaagcgctcggtgctcaacaatcctgggaaacgggccatcattga gcgatctacaacccgttccagtattgctgaagtccaaagcgagattgagcggatctttgaattggccaagtccttgcaat tggtagtgctggatgcagacaccatcaaccacccagcccagctggccaaaacctctctggctcccatcattgtctatgtc aaagtttcttccccaaaggtgttgcaacgccttattaagtccagagggaaatcacaggtgaagcatcttaatgttcaaat gatggctgctgacaaacttgtccagtgtcctccggaactctttgatgtgatcctagatgagaaccagctggaggatgctt gtgaacatctggctgaatatctggaggtttactggcgagcaacccaccaccctgcacacggcctagggagccaaaacctc ctgactccttccactgccattcctggcctgcagagccaggccccgatggccgagcacgagagtgagcgctccccggtgga gcatgacagtttgatgcaatctgacgaagtgagtgacgcctcgcgcaagacatggacggcatcctctcagcgcagctccc ggcacctggaggatgaatactccgacgcctacactgacctgtaccagcctcatcgcaaccacaacagtggcctccgcagc accaacggccatgactcgcaggaccgtcttctggagcgcgactctgagcacaatcacaatgacaggaactggcaacgcaa ccggccctgggccaaagatagttattgaaacttcctggccaggcatccagggacacaagacacagctgctgctgtctttg ccatctcccaaactgaattaatctcaagcctttgtctctttcactttgtagctgagccccacagagtgcaggtcctgccc caatacacaggtgctatctagggaagcccagacgtagccatggccgcctaaaagagcttgggtgatttgtctggccctcc ttcactttggattatgaaggccatggtaatatctttgcagggtaaacttcatatcccggttccattttgggtggggtggg gaggttaggagtagcattgggcttctgaggaagaatttttttccaaaagagaagatgattgtagctccttttttaactga acaggagatcagagctgaagattacaagggagagagtaagccaggcatgtagagaccttaggatgagtttacttcctcca agtgggaggcccagagcctcactttttgcctagctataaggttatacctgtgtgcacatgtcccaagatctgtccggaaa ttgagattggtatagataactaagatttctaattaagagggatgcgctctagaaattgatatgaacagctaatgctgatt caattacagggcatgatctttatggcattggcaaccattttgcgcaaatgctttggtgaatcatgtgcaataagcagcag gcgaaactgagctacagcctgcataaaaagaagtaatgcatcaggaagaaggtagaactaaaatgctccctgacattgaa cgttctgcattcgggggacttagtttcatttaaagttgagatgatgaaaaatcattcagctatggcagggtgatctaaga gattattgataaagttatcagctgctaatccaggtgtcacaaggccaaaagacatctatgtggcagtggcttttctacaa gaatgttataaatgtttatgaatatcactgagagggctacacagcttccatcttctgttacccttgcaactatcgataga tgaatagggccagatacaaaaggaaaaaaaaattgcttcagatttacctaagattctcttggtttccatattcttttgtg taattctcatgaccttgaagcaaagttattgattctaaggaagttgagatgcaaactgtactgtgcactagcacatgtaa taaagcctcaaggctttaacaagaac |
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| Transcript ID | habu1_s402966_g25007.t2 |
| Definition | - |
>habu1_s402966_g25007.t2 agtggagaaccaggcccagcagcagcttgaaaaagccaagtgagatttgtccatcttccaggatacagttgaggggaggg gaaaagaagggatgaattttccagtcttcatgcctatatgccatacggccaggagagcaaaccagttgcatttgctgtcc gtactaatgtcagctactgtggcgcattggatgaagaatgtcctgtgcagggatctgccatcaactttgaagccaaagac ttcttgcatattaaagagacagagcacatccctccatatgatgtggttccttccatgcggccagtggtgctggtggggcc ctcactgaaaggatacgaggtgacagacatgatgcagaaagctctttttgatttcttgaagcacagatttgatggcagaa tctccatcacgcgtgttacagcagacctgtccctggccaagcgctcggtgctcaacaatcctgggaaacgggccatcatt gagcgatctacaacccgttccagtattgctgaagtccaaagcgagattgagcggatctttgaattggccaagtccttgca attggtagtgctggatgcagacaccatcaaccacccagcccagctggccaaaacctctctggctcccatcattgtctatg tcaaagtttcttccccaaaggtgttgcaacgccttattaagtccagagggaaatcacaggtgaagcatcttaatgttcaa atgatggctgctgacaaacttgtccagtgtcctccggaactctttgatgtgatcctagatgagaaccagctggaggatgc ttgtgaacatctggctgaatatctggaggtttactggcgagcaacccaccaccctgcacacggcctagggagccaaaacc tcctgactccttccactgccattcctggcctgcagagccaggccccgatggccgagcacgagagtgagcgctccccggtg gagcatgacagtttgatgcaatctgacgaagtgagtgacgcctcgcgcaagacatggacggcatcctctcagcgcagctc ccggcacctggaggatgaatactccgacgcctacactgacctgtaccagcctcatcgcaaccacaacagtggcctccgca gcaccaacggccatgactcgcaggaccgtcttctggagcgcgactctgagcacaatcacaatgacaggaactggcaacgc aaccggccctgggccaaagatagttattgaaacttcctggccaggcatccagggacacaagacacagctgctgctgtctt tgccatctcccaaactgaattaatctcaagcctttgtctctttcactttgtagctgagccccacagagtgcaggtcctgc cccaatacacaggtgctatctagggaagcccagacgtagccatggccgcctaaaagagcttgggtgatttgtctggccct ccttcactttggattatgaaggccatggtaatatctttgcagggtaaacttcatatcccggttccattttgggtggggtg gggaggttaggagtagcattgggcttctgaggaagaatttttttccaaaagagaagatgattgtagctccttttttaact gaacaggagatcagagctgaagattacaagggagagagtaagccaggcatgtagagaccttaggatgagtttacttcctc caagtgggaggcccagagcctcactttttgcctagctataaggttatacctgtgtgcacatgtcccaagatctgtccgga aattgagattggtatagataactaagatttctaattaagagggatgcgctctagaaattgatatgaacagctaatgctga ttcaattacagggcatgatctttatggcattggcaaccattttgcgcaaatgctttggtgaatcatgtgcaataagcagc aggcgaaactgagctacagcctgcataaaaagaagtaatgcatcaggaagaaggtagaactaaaatgctccctgacattg aacgttctgcattcgggggacttagtttcatttaaagttgagatgatgaaaaatcattcagctatggcagggtgatctaa gagattattgataaagttatcagctgctaatccaggtgtcacaaggccaaaagacatctatgtggcagtggcttttctac aagaatgttataaatgtttatgaatatcactgagagggctacacagcttccatcttctgttacccttgcaactatcgata gatgaatagggccagatacaaaaggaaaaaaaaattgcttcagatttacctaagattctcttggtttccatattcttttg tgtaattctcatgaccttgaagcaaagttattgattctaaggaagttgagatgcaaactgtactgtgcactagcacatgt aataaagcctcaaggctttaacaagaac |
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Protein
| Protein ID | habu1_s402966_g25007.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g25007.t1 MSRDVASLTPGSADSYTSRPSLDSDVSLEEEREGVKREVENQAQQQLEKAKSKPVAFAVRTNVSYCGALDEECPVQGSAI NFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLEAIRLKQEQKARQSGNPAISNRRSPPPSLAKQKQKQTEHIP PYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVTADLSLAKRSVLNNPGKRAIIERSTTRSSIAE VQSEIERIFELAKSLQLVVLDADTINHPAQLAKTSLAPIIVYVKVSSPKVLQRLIKSRGKSQVKHLNVQMMAADKLVQCP PELFDVILDENQLEDACEHLAEYLEVYWRATHHPAHGLGSQNLLTPSTAIPGLQSQAPMAEHESERSPVEHDSLMQSDEV SDASRKTWTASSQRSSRHLEDEYSDAYTDLYQPHRNHNSGLRSTNGHDSQDRLLERDSEHNHNDRNWQRNRPWAKDSY |
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| Protein ID | habu1_s402966_g25007.t2 |
| Definition | - |
>habu1_s402966_g25007.t2 MPYGQESKPVAFAVRTNVSYCGALDEECPVQGSAINFEAKDFLHIKETEHIPPYDVVPSMRPVVLVGPSLKGYEVTDMMQ KALFDFLKHRFDGRISITRVTADLSLAKRSVLNNPGKRAIIERSTTRSSIAEVQSEIERIFELAKSLQLVVLDADTINHP AQLAKTSLAPIIVYVKVSSPKVLQRLIKSRGKSQVKHLNVQMMAADKLVQCPPELFDVILDENQLEDACEHLAEYLEVYW RATHHPAHGLGSQNLLTPSTAIPGLQSQAPMAEHESERSPVEHDSLMQSDEVSDASRKTWTASSQRSSRHLEDEYSDAYT DLYQPHRNHNSGLRSTNGHDSQDRLLERDSEHNHNDRNWQRNRPWAKDSY |
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