Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s402966_g25008
Locus habu1_scaffold402966 : 1368404 ... 1426295 : +
To GenomeBrowser habu1_scaffold402966:1368404..1426295
Genes list of scaffold habu1_scaffold402966

Annotation by Blast2GO
Annotation GO
adenylate cyclase type 6 EC:4.6.1.1 GO:0000166 GO:0004016 GO:0006144 GO:0006171 GO:0007212 GO:0016021 GO:0035556 GO:0071380 GO:0071870

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s402966_g25008.t1 2 1 Guanylate_cyc 363 544 0.0 367.7 0.0 0.0 191.5
habu1_s402966_g25008.t1 1 1 DUF1053 573 661 4.3e-26 91.2 2.5e-29 1.2e-25 89.7
habu1_s402966_g25008.t1 2 2 Guanylate_cyc 907 1073 0.0 367.7 0.0 0.0 174.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s402966_g25008.t1 gi|602628759|ref|XP_007421312.1| PREDICTED: adenylate cyclase type 6 isoform X1 [Python bivittatus] 0.0
habu1_s402966_g25008.t1 gi|637265509|ref|XP_008102233.1| PREDICTED: adenylate cyclase type 6 [Anolis carolinensis] 0.0
habu1_s402966_g25008.t1 gi|729737503|ref|XP_010564872.1| PREDICTED: adenylate cyclase type 6 [Haliaeetus leucocephalus] 0.0
habu1_s402966_g25008.t1 gi|530643553|ref|XP_005308461.1| PREDICTED: adenylate cyclase type 6 [Chrysemys picta bellii] 0.0
habu1_s402966_g25008.t1 gi|543377795|ref|XP_005532101.1| PREDICTED: adenylate cyclase type 6 [Pseudopodoces humilis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 3.8
Venom grand-1 1.5
Pit, infrared sensing 2.9
Nose 2.9
Brain-1 4.2
Eye 3.1
fetal fibroblast 2.0
venom gland-2 2.4
Brain-2 3.8
Spleen 1.7
Lung 4.4
Liver 3.4
Kidney 5.5
Pancreas 1.8
Small intestine 1.8
Large intestine 5.1
Stomach 2.8
heart 17.2
ovary 19.1
cheek muscle 3.4

Transcript
Transcript IDhabu1_s402966_g25008.t1
Definition-
>habu1_s402966_g25008.t1
gccctattcctaggggccttccagtatgtcctggtttagtggcatcctggtgcccaaggtggatgagcggaagaccgctt
ggggggagcgcaatgggcccaagcgccatcgcccagcactttgtggcccacgctacatgagctgcctacaggaccaagag
ctggagcgcagaggcagtggtgcgctggggttgaactgttcttggcaggaagaccactatggcaggaagcaaccaccgtc
acttctgcctggttctggaactggagatttggggctcaaagctgtggacctgggatttgaggatggtgatgccagcatgg
tggttgaggccaaggggctgtctgccagcgattgcggctggcgcctcctgcaagtgttccgctctaagcgcttccgctca
gccaagttggagcgtctctaccagcgctacttcttccagatgaaccagagttcactgacggtgctgatgggtgtcttggt
gctagcgtgttgcatcatgctgctcttccactgtgtgcctggcactcccaatgtgtcctacaccgctgcccttgccgtgg
ctgctaccctcttcctctccctgatggtcctctgcaatcggactggcttccaccagaactgcatgtgggtggtgagctat
ctggtcatcctggcactctgtggagtgcaggctttgggcactctccgggtctcaccacgaagtgcctccgagggggtctg
gtggagcatcttcttcatctacatcatctacacgcttctgcccgtgcgcatgcgggtggcagtgctgtctggagccttgc
tggctgtccttcatctggtgatttcttggtaccagaacagtacagactccttcgtttggaagcagcttgttgcaaatgct
ttgatcttcctctgtaccaacatcattggtatctgcacccactatccagctgaagtgtcacagcgccaggccttccggga
aacacgtggctacatccaggctcgactgcatttacaacgtgaaaaccgtcagcaggaacgacttctcctctcagtcctgc
cccaacatgttgctatggaaatgaaggaggacatcaacaccaagaaggaagacatgatgttccacaagatctatatccag
aaacatgacaatgtcagcattctctttgccgacattgagggcttcactagcttggcatcccagtgcacggcacaagaact
ggtcatgacactgaatgaactttttgcccgttttgataagctggctgcggaaaatcattgccttcgcataaagatcctcg
gggattgctactattgtgtctcaggattgccagagccacgggctgatcatgcccattgctgcgtggagatgggtgttgac
atgatcgaggcaatttcgctggtacgggaagtgacaggtgttaatgtcaacatgcgtgttgggatccacagtgggcgtgt
gcactgtggagtgctaggactgcgcaagtggcagtttgatgtctggtctaatgatgtcaccttggccaatcatatggaag
ctggtggcaaagcggggcggatccacattacccaggctactctgcagtacctgaatgaggactatgaagtagagccgggg
cacgggggtgagcgcaatgcttacctgaaggagcataacattgaaaccttcttcattgtgggctgcagccagaaacggaa
agaagagaaagcaatattagccaagctgcagcgagcccaggcaaattccacagaagggctggtgcctcgctgggtccccg
agcgctcatttccacggaacaaggactctaaggcgttacgacagatgggtattgatgattccagcaaagacaaccgaagt
acacaggaagccttaaatcctgaagacgaggtggatgagttcttgggtagggccatcgatgctcgaagcattgaccagct
gcgcaaggatcatgtcaaacgctttctgctcactttccagaagcctgagttggagagaaagtattccaaaaaggtggata
cccgctttggtagttatgtggcttgcaccatgctagtcttctgcttcatttgttgcatccagatagtcatcttcccacat
tcctctctgatgcttggtgcctacatcagtatcttcatcatcctggcctccattctttttgtgtgtgccatttattcctg
ccttggtccctttcctgccgctttgcagcgtgcttctcgcaagatcatccaatcccgaatcaacagcaccattactggcg
ttgtctccatcctgcttgtcttcatctctgcttttgtcaacatgtacttcacttactcggtgttgctgagtctgctggcc
tcttccgtcttcctgcacatcagtagcctcaggaagctggcactgctggtggtgatggaggtggtatacttggtactggc
tgagggccctcagggcgtgctgtttgacaactatgacttgctggtggctactaatgctctgccagccttcaatgagactc
agccctgtagtttttcagagaaaaaagtgcctctgcagtacatgacacctgttatcctgttactttttgctttggccctc
tatcttcatgcccagcaagtcgaatcaacagcacgccttgattttctctggaagcaacaggctacaggtgaaaaggaaga
gatggaagagctacaggcctataatcgtcggttgttacacaacatcttgcccaaagatgtggcagctcactttctggccc
gggaacgcctcaatgatgagctgtaccaccaatcgtgtgagtgtgtggctgtcatgtttgcctcaatcagcaatttctct
gagttctacgtggagctggaagccaacaatgagggtgttgaatgccttcggttgctcaacgagatcattgctgactttga
cgagatcatcagtgacgaaccgttcaggcagctggagaagatcaagacaattggaagtacttacatggcagcatcggggc
taaatgatagcacctatgaccgagaggggcgctcgcacatcactgcgctggccgactatgccatgaggctcatggaacag
atgaaatatatcaatgaacactctttcaataattttcaaatgaaaattggactaaacattggtccagtagtggctggtgt
gattggagcccgaaagccacagtatgacatctggggcaacactgtaaatgtttctagccgtatggacagcactggcgtcc
ctgaccgcattcaggtgacaactgacctctatcaggcttcaggaaccttcactcagaacaggctgaagagaggatcagtg
actgccatgtagtctataaacctacagccaaaaaataaatggaattgttaattcccttttc

Protein
Protein IDhabu1_s402966_g25008.t1
Definition-
>habu1_s402966_g25008.t1
MSWFSGILVPKVDERKTAWGERNGPKRHRPALCGPRYMSCLQDQELERRGSGALGLNCSWQEDHYGRKQPPSLLPGSGTG
DLGLKAVDLGFEDGDASMVVEAKGLSASDCGWRLLQVFRSKRFRSAKLERLYQRYFFQMNQSSLTVLMGVLVLACCIMLL
FHCVPGTPNVSYTAALAVAATLFLSLMVLCNRTGFHQNCMWVVSYLVILALCGVQALGTLRVSPRSASEGVWWSIFFIYI
IYTLLPVRMRVAVLSGALLAVLHLVISWYQNSTDSFVWKQLVANALIFLCTNIIGICTHYPAEVSQRQAFRETRGYIQAR
LHLQRENRQQERLLLSVLPQHVAMEMKEDINTKKEDMMFHKIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELF
ARFDKLAAENHCLRIKILGDCYYCVSGLPEPRADHAHCCVEMGVDMIEAISLVREVTGVNVNMRVGIHSGRVHCGVLGLR
KWQFDVWSNDVTLANHMEAGGKAGRIHITQATLQYLNEDYEVEPGHGGERNAYLKEHNIETFFIVGCSQKRKEEKAILAK
LQRAQANSTEGLVPRWVPERSFPRNKDSKALRQMGIDDSSKDNRSTQEALNPEDEVDEFLGRAIDARSIDQLRKDHVKRF
LLTFQKPELERKYSKKVDTRFGSYVACTMLVFCFICCIQIVIFPHSSLMLGAYISIFIILASILFVCAIYSCLGPFPAAL
QRASRKIIQSRINSTITGVVSILLVFISAFVNMYFTYSVLLSLLASSVFLHISSLRKLALLVVMEVVYLVLAEGPQGVLF
DNYDLLVATNALPAFNETQPCSFSEKKVPLQYMTPVILLLFALALYLHAQQVESTARLDFLWKQQATGEKEEMEELQAYN
RRLLHNILPKDVAAHFLARERLNDELYHQSCECVAVMFASISNFSEFYVELEANNEGVECLRLLNEIIADFDEIISDEPF
RQLEKIKTIGSTYMAASGLNDSTYDREGRSHITALADYAMRLMEQMKYINEHSFNNFQMKIGLNIGPVVAGVIGARKPQY
DIWGNTVNVSSRMDSTGVPDRIQVTTDLYQASGTFTQNRLKRGSVTAM

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Okinawa Institute of Science and Technology
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