Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s402966_g25010
Locus habu1_scaffold402966 : 1478334 ... 1519386 : +
To GenomeBrowser habu1_scaffold402966:1478334..1519386
Genes list of scaffold habu1_scaffold402966

Annotation by Blast2GO
Annotation GO
nck-associated protein 5-like GO:0006351 GO:0031323 GO:0060255 GO:0080090

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s402966_g25010.t1 1 1 NCKAP5 642 777 0.0 163.2 0.0 0.0 163.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s402966_g25010.t1 gi|602628747|ref|XP_007421306.1| PREDICTED: nck-associated protein 5-like [Python bivittatus] 0.0
habu1_s402966_g25010.t1 gi|637265530|ref|XP_008102237.1| PREDICTED: nck-associated protein 5-like isoform X1 [Anolis carolinensis] 0.0
habu1_s402966_g25010.t1 gi|637265534|ref|XP_008102238.1| PREDICTED: nck-associated protein 5-like isoform X2 [Anolis carolinensis] 0.0
habu1_s402966_g25010.t1 gi|530643609|ref|XP_005308489.1| PREDICTED: nck-associated protein 5-like [Chrysemys picta bellii] 0.0
habu1_s402966_g25010.t1 gi|554566155|ref|XP_005877377.1| PREDICTED: nck-associated protein 5-like isoform X3 [Myotis brandtii] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 2.7
Venom grand-1 0.8
Pit, infrared sensing 3.2
Nose 0.9
Brain-1 3.2
Eye 5.0
fetal fibroblast 2.4
venom gland-2 0.4
Brain-2 2.7
Spleen 2.4
Lung 3.4
Liver 0.6
Kidney 2.0
Pancreas 0.4
Small intestine 0.6
Large intestine 1.7
Stomach 0.6
heart 2.5
ovary 6.7
cheek muscle 0.9

Transcript
Transcript IDhabu1_s402966_g25010.t1
Definition-
>habu1_s402966_g25010.t1
agtcccgtttgccacaagtaataccgcaggccacttttgcggaaccagtgggtgcatttccccctgtggcgatacagctc
cttcccttggaaggccgcggacgcgtgctcccttcctctctcctctgcctcgcgctggggaaaaggctcgatcctcctaa
agttaagccggatcttcccgctgctccaggtggtcctcggaaggtcgtgggtttttcgttttggcaaaagtgatgaaggg
aagcccggaggttgggcttgtcatagtgtccatcgctgggcccttgaaaaaaggaaaccatgtctgaaattgagctgcag
agcaagatgaagccggaaggggatggccatgagccaaggacaccccaggaccttctgcagagactccgggagctagaggc
agagaatttggctttggtgcaagccaatgagaaccagcgggaaacttacgaacgctgcctggatgaggtagccaaccacg
tggtgcaagcgctgttaaaccaaaaagatctccgtgaagaatgcataaagctgaaaaaacgggtctttgacttggagcgg
caaaaccaggcactcagtgatcttttccatcgaaagctgacttctgggtctctctcccaggtcatctctgaggagcattg
tctggaaatccctggatctaatccccaatctctggaagctctctcccctttcctgcgaaagaaggcccaaatcctggaag
tgcttcgttccctggaagagatggacccactgcttgcctttccttccccttggagagaccctgggcagctgagctctcca
gagggagtgacggcagaagcttggccgtgtctgctgttggctcagggtgaaggggtgcctgggcagcctccactgaaaag
tgagggcagctcatcctcctcctcggatgaggccggggaacctgatcctccagagaaaggacacccggggcaggtgttgc
tgagtgcactggctgaacacaagctagaattaggtgaggtggagacgtacctgcagcatgtccttcgggaggctggcgac
agtgccctgctcaatggagagcccagtggaccctgcttgatgggaaaccctgaagggcaggccaggagctacaagcacat
ccaggctgtgagttgcctagaggctttggggcctccctctccctgcagggagccagcctacctgagcgtccttgcatcca
gcgaagagaaagataagtctcggcaaggactccctatcccctccccctccaaggtgctcaaattgctgaaaatgccaccg
ccccctagccctgctgccctgcgcctcagcccacagctgacccgcagttccaaaatcccctgccgcagtaacacctacga
ggctggccggccccttattccagagtcccccccaatcgctcccacattaccagacccttttgggtaccacaaaccccacg
agtacgagaacatcttagagctgaccctcagcaccgccatgagctctcggtccccctcatcccgcgatgcaaaactggat
gcacctgaggcactcctgccttcctgccgcttggctcctcttcgggcagtgccgcctggcgaggtctcgctggagccctg
ccctgccggcaaccgagaaaagtcgggcccagagaacaggcgctcgccgcctccggcccgcaggaaccccgacaattcca
agagaggcgccagcagctctgccaagcggacgctcgaggtggcagccagcatgcccttcaaagagcgactgacggtgctc
gggaggttaaagggggcggaggggaaagagggactgggctttgagaaggggagagcccccacccggccaggggagcgtgg
ggaaagctttcctgatgcccaccccaggctgggctctgggagcagcagcctcaagcaccctgagccttgccatgggaatg
aatcaacccctcgttgctactcctcccattctgttggttcccgcggcaacgactctgagcaccagggctctaggaatcgc
tccttaggaacgccagcgaaccgaaatccctccaaacccctgccccctgggaagaatgccaagagtccccacgggagccc
gactaagttaccttccaagtccccaaccaaaccccctgctccagaacccaagccgtgcctgccctcagccaaggcatcca
gcagttttgggcgcaaaaacccctctggcccggaccaggccaagggcaaagctgggcctcccgccagtattgaagaaaag
gtgatgaaaggcattgaagagaatgtcttgcgaaggcacaaaggtgggccggctgcaggagagaccaagcagaagaattc
gagtggtcttgccagttggtttggcctgcgtaagagcaagctgccagcccttagccggaggccggagactcccaaagcca
aggagagcaaagccgtctcacgcaagctggagtccgaaagcttgaacatttccaagctcatggagaaggcagaggacctg
cgcaaagccctggaggaagagaaggcctacatcaatgggctggccttggacaagcctcggtcccacacctgtgacgccgg
acacagccagctcaccctcatgtaccaggaggtgactgcagagaacttcatgcagcagctgctcaataggtaggtcagag
cagggagagcagatcagagggtatctgtctggaagggcttaaaagcacattggtgaaggctgatctcaccctaagaggga
ccatacttaagctaggatcagcactttgtttcacaaactctgggatctagatttgcataaaactgaggatttctggttgg
gatcaagagtagagccagtgaggtggtaagagcgaatgaacagctgtacagattgagactctttttagagggacttcccc
cttcccctgttttttaatctttaaaacttccaccaaatgccgcccatttgtttccaagcttttttcacattcccgaggag
ctaaaatgtcccccctctccttttgtttttaaatagttttatcaccctcaaggttgctaacagggtcccagattctgaat
atctgggacaagttatggtgtgcccagagtttaaaatccaggagcctgaaaacgattctgatttttggctctgagggatg
agaactggacttaaggagttccatcttaagctctgcaacccatgtactgaacgtaggcacgtcctctagatgttttgcca
ttttacttctcgccaatccaagccagcaaggacagtgggtggggcttgtggaagttgtggttgaagacagtatgaaggac
atccgttcgcctactcctgcgatggtattgagagagagggccccaagtctcttcctacgagatttgtagttctaacctgc
agatcttgcaaaacgggtaaggatggaaagaaagagaagctttggggtactgacctccactgcactgcagggtggatggg
aaagaggcaccatgtgagactcatctggagcagaagaatgagctacagggcctgcaaagaggcctgcgtgatgccaaaga
tccccgccttatccggccgccacgcaatggcattgttgggcacctccatgcctgtccggaggctccagacaaggtgagct
ctctgtggtgggagggagcggcctgaagcccctcatccatgcctcagctgccgaaggactcactcttgtctcctttgtct
cccctgtagcttcacgaagctgccttgcgggaagagctgccatctgatgacagcttggctgaactggtaacctcccagca
ctttgccggtgagctctaaagaaaactgaagggttaggctgaggggttgaccaaagagttgttattttaacttagcagca
agcatagaatggtctccctagtcatttgggagccagtactgttgaaatgcggtaaaaaaaaaaaaaaatcagatttcttc
cacaaggagaacgaggtcctgtcaacaatattcccatgattccacacgagcttccatgaattgtactccaggtttacaca
ggaaattactaccacagagaattgcttcctagagaagaaatgcatatcctctctgtagtggagtctggtggctttgttcc
aattatcagattataaaaaggggggtggatttttttttactatgtaacgcagcctctgccacttcataccctttgaactg
aattaacaattcccataattttccatcagtgtgatcaataccaatgatatcagagaattctgggagtcagaagtttagaa
caaccagatgttgacagaacgttagacattgaatataaaaagaataattaggtaatgcttgctgacaactcattcttcag
agagcataggtgtggaagaaaatgaggtatttatgttaatgtggttggaagtcccgtttcctggattttcttcctagtag
tggaaagaggacagaagaaagtgctccactgaactttggaaaaggcagtgagggcagaataacatgttttagatcagcaa
catttgtccacaattatagcacctgcaactcacctacattgtggactgctgaaatgtattttttaaaacaatcaaacatt
tcccatatctcggggagcagatggtggctcattcattatttgggattttttatagcttaatttttaaaatgatgtttatt
ttttttattgtggaaaatcacatggcaaatgccccgtcttaaaaggtgcctgacagttgaattacatctccctgttttct
tgttttgcttttcctctaaagcagtggtccccaacccctgggtcgcgagtccatccccttccccatctctgccaccatca
ctgccggtccacagagctggaaaggttggagactgctgctctgagggagctcggtttgaagataaataagaattctagga
gtttttttctccaggcaggtgtatttttatggaagtaaaagtatggctttcctaaacttaaattccaactcctatcatct
ctggccattggccatgaaacctggagttcaacaatatttggagagttacagtacatgctatccactccctcatataatgg
ccccaaatgttaagtaggtcatgagatggatttctggaggaggtgtggactttggcttcatcgctcctcatagtttttgc
ttatgtccggttatgtccacagtatgtagctccttgacacggactctggacagtggtattggcacattcccccctcctga
ctactgcagtgggatgccctgcaagagtgtcccgaaactgagacctcgattggatcctccagcagcaggacctctcccac
ctagaggtcccccacctgtcaccagagtgccccgcaaagcccgaacgctggaaagggaggtgccaagcacagaggacttg
atggggcctagcaagcaccaaagcatgccagctttccatggcatcttaaccagtgcagagccagccctcaaccgccacga
tcgcagaggctacctgcaaggtttgtaccatttgaaagagatctaaccaaag

Protein
Protein IDhabu1_s402966_g25010.t1
Definition-
>habu1_s402966_g25010.t1
MSEIELQSKMKPEGDGHEPRTPQDLLQRLRELEAENLALVQANENQRETYERCLDEVANHVVQALLNQKDLREECIKLKK
RVFDLERQNQALSDLFHRKLTSGSLSQVISEEHCLEIPGSNPQSLEALSPFLRKKAQILEVLRSLEEMDPLLAFPSPWRD
PGQLSSPEGVTAEAWPCLLLAQGEGVPGQPPLKSEGSSSSSSDEAGEPDPPEKGHPGQVLLSALAEHKLELGEVETYLQH
VLREAGDSALLNGEPSGPCLMGNPEGQARSYKHIQAVSCLEALGPPSPCREPAYLSVLASSEEKDKSRQGLPIPSPSKVL
KLLKMPPPPSPAALRLSPQLTRSSKIPCRSNTYEAGRPLIPESPPIAPTLPDPFGYHKPHEYENILELTLSTAMSSRSPS
SRDAKLDAPEALLPSCRLAPLRAVPPGEVSLEPCPAGNREKSGPENRRSPPPARRNPDNSKRGASSSAKRTLEVAASMPF
KERLTVLGRLKGAEGKEGLGFEKGRAPTRPGERGESFPDAHPRLGSGSSSLKHPEPCHGNESTPRCYSSHSVGSRGNDSE
HQGSRNRSLGTPANRNPSKPLPPGKNAKSPHGSPTKLPSKSPTKPPAPEPKPCLPSAKASSSFGRKNPSGPDQAKGKAGP
PASIEEKVMKGIEENVLRRHKGGPAAGETKQKNSSGLASWFGLRKSKLPALSRRPETPKAKESKAVSRKLESESLNISKL
MEKAEDLRKALEEEKAYINGLALDKPRSHTCDAGHSQLTLMYQEVTAENFMQQLLNR

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