Gene
| Gene Model ID | habu1_s402966_g25012 |
|---|---|
| Locus | habu1_scaffold402966 : 1595094 ... 1612499 : + |
| To GenomeBrowser | habu1_scaffold402966:1595094..1612499 |
| Genes list of scaffold | habu1_scaffold402966 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| formin-like protein 3 isoform x1 | GO:0003779 GO:0005737 GO:0008360 GO:0016477 GO:0017048 GO:0030036 GO:0032794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402966_g25012.t1 | 2 | 1 | Drf_GBD | 17 | 46 | 1.3e-09 | 37.7 | 3.5e-06 | 0.026 | 13.8 |
| habu1_s402966_g25012.t1 | 2 | 2 | Drf_GBD | 52 | 90 | 1.3e-09 | 37.7 | 6.1e-09 | 4.5e-05 | 22.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s402966_g25012.t1 | gi|602628743|ref|XP_007421304.1| | PREDICTED: formin-like protein 3 [Python bivittatus] | 0.0 |
| habu1_s402966_g25012.t1 | gi|637265556|ref|XP_008102243.1| | PREDICTED: formin-like protein 3 isoform X3 [Anolis carolinensis] | 0.0 |
| habu1_s402966_g25012.t1 | gi|637265552|ref|XP_008102242.1| | PREDICTED: formin-like protein 3 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s402966_g25012.t1 | gi|637265544|ref|XP_008102240.1| | PREDICTED: formin-like protein 3 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s402966_g25012.t1 | gi|637265561|ref|XP_008102244.1| | PREDICTED: formin-like protein 3 isoform X4 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.4 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 1.0 |
| Nose | 0.1 |
| Brain-1 | 0.9 |
| Eye | 0.1 |
| fetal fibroblast | 5.6 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.8 |
| Spleen | 0.6 |
| Lung | 0.2 |
| Liver | 0.1 |
| Kidney | 0.1 |
| Pancreas | 0.4 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 0.5 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s402966_g25012.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g25012.t1 gacccatctagggtcccccaagcaagaagaaactagctgtggggagcagaggtccgctctcacgcagccatgcgctgcgg gcgcaaaactggaatcacaattgaaatgtttaagagctccatgaatctccctcctgacaaggcccgtcttctgaggcaat atgacaacgagaagaaatgggacctaatttgtgaccagaagttccgtcggagggtgcaggaatccaccaaagtgctgagg gagctggagatctctttaaggaccaatcacattgggtgggtgcgtgaatttctcaacgatgaaaacaaaggcctggatgt gctggtggactacctctcatttgctcagtgtgcagtgatgtttgattttgagggtctggaaaatagcgaggatggagccc tagagaagctgaaatcttggagcaggtccatagaggatctgcagcaccccagcaccctgtctgctccctacgccaacagt cttgctcgctctgcgcgccagtctgctctccggggatgccgtgtgctgatttcttcttcccactcccattctcccccctt gatgttcctctgagggtagctggccaggtctcttctctgctccaggccttgcctttgccctgctctgtttgcctgtcttt gctgggtctcctgttctctcttttttctgtccttattaccttgatacaccacacttcccagcagaaaagctctgaagaac tcacggctggtgagccagaaagatgatgtgcacgtgtgcatcttgtgtttgcgagccatcatgaactatcaggtatcgct ggcctgacccttaggagtgctggctttgagctgggataggggttttgggggtgcttggctgtggtgaatttacaggaaac ttggactctaccctaatagaataaatgattttaaatttgtgtatgca |
|
Protein
| Protein ID | habu1_s402966_g25012.t1 |
|---|---|
| Definition | - |
>habu1_s402966_g25012.t1 MRCGRKTGITIEMFKSSMNLPPDKARLLRQYDNEKKWDLICDQKFRRRVQESTKVLRELEISLRTNHIGWVREFLNDENK GLDVLVDYLSFAQCAVMFDFEGLENSEDGALEKLKSWSRSIEDLQHPSTLSAPYANSLARSARQSALRGCRVLISSSHSH SPPLMFL |
|