Gene
| Gene Model ID | habu1_s402_g01860 |
|---|---|
| Locus | habu1_scaffold402 : 58826 ... 80811 : + |
| To GenomeBrowser | habu1_scaffold402:58826..80811 |
| Genes list of scaffold | habu1_scaffold402 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| enoyl- hydratase domain-containing protein mitochondrial isoform x2 | GO:0003824 GO:0005739 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402_g01860.t2 | 1 | 1 | ECH | 52 | 271 | 0.0 | 167.1 | 0.0 | 0.0 | 166.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s402_g01860.t2 | gi|557261680|ref|XP_006016393.1| | PREDICTED: enoyl-CoA hydratase domain-containing protein 3, mitochondrial, partial [Alligator sinensis] | 0.0 |
| habu1_s402_g01860.t2 | gi|564233284|ref|XP_006261010.1| | PREDICTED: enoyl-CoA hydratase domain-containing protein 3, mitochondrial [Alligator mississippiensis] | 0.0 |
| habu1_s402_g01860.t2 | gi|530636512|ref|XP_005305093.1| | PREDICTED: enoyl-CoA hydratase domain-containing protein 3, mitochondrial [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.2 |
| Venom grand-1 | 8.4 |
| Pit, infrared sensing | 4.2 |
| Nose | 3.5 |
| Brain-1 | 1.6 |
| Eye | 4.1 |
| fetal fibroblast | 5.1 |
| venom gland-2 | 7.9 |
| Brain-2 | 2.3 |
| Spleen | 9.1 |
| Lung | 9.2 |
| Liver | 83.1 |
| Kidney | 23.4 |
| Pancreas | 26.4 |
| Small intestine | 10.6 |
| Large intestine | 7.9 |
| Stomach | 25.0 |
| heart | 8.8 |
| ovary | 29.2 |
| cheek muscle | 14.6 |
Transcript
| Transcript ID | habu1_s402_g01860.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01860.t1 gctctttttccagccgccgttccgcgtctggccggcaggggtctcccttgagccgctccgctctgcgccgctgcaacgag cgatggccgctgcagccgcccgcggagggctttgcagggcgaagctggcgcggctcgtcccgggcagccggactgcttcg accggcagccccgcagtcccaacgcccgatgggccgcggcagcaggagcagcagcaagggaagctcacccgcgtgtggca gagcgaaggcatcaggaacatcgttctgagcaatcccggcaaaagaaatgcgctctccctttccatgctgaagtccctcc gtcaggaaattttgcacaatattgacagcacggatctgcgcgtcattatcatttcagccgaaggccctgttttctcctct ggacatgacttgaaggaattaaccgggaaggaagacacaaagcagcatatggacatcttcaaaacctgttcagaggtggc actcgagatcctcttcaccggagagcccatgtcagctcaggatgcccttcgccacggactcatcagccgagtggtacctg aggatcagctggaaaacgagaccttgagagttgcccaaaagatctgccagagcagccgggccgtgttagctctggggaag gccactttttacaaacagatggaacatgatattggcacagcctaccagatagcttcacagggggaaaggaggaggaggaa agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagagtgaaattaaataaataaacggaggaggagaagg agaagggcgaaaggaaaggaaagaggaagaaagagaagggagaaaggaaaggaaagaggaaggagaggggaggagagaaa acaaaagagaaaaagaaaagaaccaactcacagccgccaggacctgtccaactggtttttaaaaccatgcgcggaatgtg cgttcttcctgtgccggagatcgctggtaggcctgggggcaccatctagttgttcgtgaactcctcattatgagctttgg agtgtgcatataagcaggtgtggaaccgttccaaaaagaaagagctactgtgccaatatggtttctctctattgcaaaag aacacttcgggcggatgagaaaagattgaggagggtctgaaagaaatttggctcgggaatttgcttccctcctaatgtaa gcctttttagccaagtatgatcaagggttagcgagctgcgaactgtgtacagaaaaaaaaaaatggggaacgagaaataa tcatcttcctggcgctgcaattaccaggaaggtagttagttagctcatcagatagtcagtggctttagtcatttactaca gctcttgttatttttgcatagggagaagaattactttaggaaccccgtacaaaatatctgggctaatacccacaataaac aattgtggcacatcagctatt |
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| Transcript ID | habu1_s402_g01860.t2 |
| Definition | - |
>habu1_s402_g01860.t2 gctctttttccagccgccgttccgcgtctggccggcaggggtctcccttgagccgctccgctctgcgccgctgcaacgag cgatggccgctgcagccgcccgcggagggctttgcagggcgaagctggcgcggctcgtcccgggcagccggactgcttcg accggcagccccgcagtcccaacgcccgatgggccgcggcagcaggagcagcagcaagggaagctcacccgcgtgtggca gagcgaaggcatcaggaacatcgttctgagcaatcccggcaaaagaaatgcgctctccctttccatgctgaagtccctcc gtcaggaaattttgcacaatattgacagcacggatctgcgcgtcattatcatttcagccgaaggccctgttttctcctct ggacatgacttgaaggaattaaccgggaaggaagacacaaagcagcatatggacatcttcaaaacctgttcagaggtcat gacgttgcttcccaagctacccgtgccggtgattgccaaagtaaatggccttgccacagccgccggttgccagctggtgg ccagctgtgacattgccgtggccagcgagaagtccaggttcgccacccctggagtgaacgtgggtctgttctgctcaaca ccagcagtagccattggaagatccctgcctaaaaaggtggcactcgagatcctcttcaccggagagcccatgtcagctca ggatgcccttcgccacggactcatcagccgagtggtacctgaggatcagctggaaaacgagaccttgagagttgcccaaa agatctgccagagcagccgggccgtgttagctctggggaaggccactttttacaaacagatggaacatgatattggcaca gcctaccagatagcttcacagggggaaaggaggaggaggaaagaagaagaagaagaagaagaagaagaagaagaagaaga agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag aagaagagtgaaattaaataaataaacggaggaggagaaggagaagggcgaaaggaaaggaaagaggaagaaagagaagg gagaaaggaaaggaaagaggaaggagaggggaggagagaaaacaaaagagaaaaagaaaagaaccaactcacagccgcca ggacctgtccaactggtttttaaaaccatgcgcggaatgtgcgttcttcctgtgccggagatcgctggtaggcctggggg caccatctagttgttcgtgaactcctcattatgagctttggagtgtgcatataagcaggtgtggaaccgttccaaaaaga aagagctactgtgccaatatggtttctctctattgcaaaagaacacttcgggcggatgagaaaagattgaggagggtctg aaagaaatttggctcgggaatttgcttccctcctaatgtaagcctttttagccaagtatgatcaagggttagcgagctgc gaactgtgtacagaaaaaaaaaaatggggaacgagaaataatcatcttcctggcgctgcaattaccaggaaggtagttag ttagctcatcagatagtcagtggctttagtcatttactacagctcttgttatttttgcatagggagaagaattactttag gaaccccgtacaaaatatctgggctaatacccacaataaacaattgtggcacatcagctatt |
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Protein
| Protein ID | habu1_s402_g01860.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01860.t1 MAAAAARGGLCRAKLARLVPGSRTASTGSPAVPTPDGPRQQEQQQGKLTRVWQSEGIRNIVLSNPGKRNALSLSMLKSLR QEILHNIDSTDLRVIIISAEGPVFSSGHDLKELTGKEDTKQHMDIFKTCSEVALEILFTGEPMSAQDALRHGLISRVVPE DQLENETLRVAQKICQSSRAVLALGKATFYKQMEHDIGTAYQIASQGERRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEE EEEEEEEEEEEEEEE |
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| Protein ID | habu1_s402_g01860.t2 |
| Definition | - |
>habu1_s402_g01860.t2 MAAAAARGGLCRAKLARLVPGSRTASTGSPAVPTPDGPRQQEQQQGKLTRVWQSEGIRNIVLSNPGKRNALSLSMLKSLR QEILHNIDSTDLRVIIISAEGPVFSSGHDLKELTGKEDTKQHMDIFKTCSEVMTLLPKLPVPVIAKVNGLATAAGCQLVA SCDIAVASEKSRFATPGVNVGLFCSTPAVAIGRSLPKKVALEILFTGEPMSAQDALRHGLISRVVPEDQLENETLRVAQK ICQSSRAVLALGKATFYKQMEHDIGTAYQIASQGERRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE EE |
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