Gene
| Gene Model ID | habu1_s402_g01862 |
|---|---|
| Locus | habu1_scaffold402 : 194958 ... 197295 : - |
| To GenomeBrowser | habu1_scaffold402:194958..197295 |
| Genes list of scaffold | habu1_scaffold402 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402_g01862.t1 | 1 | 1 | Complex1_LYR | 8 | 60 | 1.8e-13 | 50.0 | 4.9e-17 | 1.8e-13 | 50.0 |
| habu1_s402_g01862.t1 | 1 | 1 | Complex1_LYR_1 | 8 | 64 | 2.5e-12 | 46.7 | 1.0e-15 | 3.9e-12 | 46.1 |
| habu1_s402_g01862.t1 | 1 | 1 | Complex1_LYR_2 | 9 | 80 | 8.1e-07 | 29.4 | 2.6e-10 | 9.6e-07 | 29.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s402_g01862.t1 | gi|694631551|ref|XP_009491566.1| | PREDICTED: LYR motif-containing protein 5 [Pelecanus crispus] | 5.99756e-43 |
| habu1_s402_g01862.t1 | gi|723128440|ref|XP_010280475.1| | PREDICTED: LYR motif-containing protein 5 [Phaethon lepturus] | 1.00053e-42 |
| habu1_s402_g01862.t1 | gi|557289521|ref|XP_006027398.1| | PREDICTED: LYR motif-containing protein 5 isoform X1 [Alligator sinensis] | 1.99965e-42 |
| habu1_s402_g01862.t1 | gi|663249960|ref|XP_008488441.1| | PREDICTED: LYR motif-containing protein 5 [Calypte anna] | 3.00018e-42 |
| habu1_s402_g01862.t1 | gi|699593126|ref|XP_009867163.1| | PREDICTED: LYR motif-containing protein 5 [Apaloderma vittatum] | 4.99983e-42 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.3 |
| Venom grand-1 | 137.3 |
| Pit, infrared sensing | 30.6 |
| Nose | 24.7 |
| Brain-1 | 11.1 |
| Eye | 35.2 |
| fetal fibroblast | 14.3 |
| venom gland-2 | 108.5 |
| Brain-2 | 9.3 |
| Spleen | 45.8 |
| Lung | 14.9 |
| Liver | 55.2 |
| Kidney | 27.8 |
| Pancreas | 230.5 |
| Small intestine | 40.2 |
| Large intestine | 21.4 |
| Stomach | 81.6 |
| heart | 60.7 |
| ovary | 59.8 |
| cheek muscle | 77.2 |
Transcript
| Transcript ID | habu1_s402_g01862.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01862.t1 aacagctggtgaagttgcagttcctggactgcgcaggtaaatatgccagtccacatgaataaaacggacgtaagtctcaa ctgacaacatggccaaccctcttagatacgaagtactgaatctgtacaaaaaccttctgtatctgggaaaggagtacccc aaaggggctgattactttcgaacccgactcaaggcagccttcctgaaaaacaaggaagtgaaggatccagaagaaatcaa aaaactgattaccagaggcaagtttgtcattaaagaactggaagccttgtacttcctccgaaaatatcgagctcttaaaa aacgatactacgaggacagttgagcactaactggttgtaaaatctgcaaggcattcgtagccaatgggttaaatggtggg tgattggcctgtagtaataataataaaatctgttgaatgatggattcgt |
|
Protein
| Protein ID | habu1_s402_g01862.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01862.t1 MANPLRYEVLNLYKNLLYLGKEYPKGADYFRTRLKAAFLKNKEVKDPEEIKKLITRGKFVIKELEALYFLRKYRALKKRY YEDS |
|