Gene
| Gene Model ID | habu1_s402_g01863 |
|---|---|
| Locus | habu1_scaffold402 : 198696 ... 220887 : + |
| To GenomeBrowser | habu1_scaffold402:198696..220887 |
| Genes list of scaffold | habu1_scaffold402 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein casc1 | GO:0015631 GO:0045298 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402_g01863.t3 | 1 | 1 | Casc1 | 352 | 440 | 3.1e-08 | 33.4 | 1.1e-07 | 0.00079 | 18.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.5 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 2.1 |
| Nose | 8.4 |
| Brain-1 | 0.5 |
| Eye | 0.2 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.5 |
| Spleen | 0.3 |
| Lung | 0.8 |
| Liver | 0.0 |
| Kidney | 0.2 |
| Pancreas | 0.1 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 0.0 |
| ovary | 4.6 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s402_g01863.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01863.t1 gaggggcggggtcatcaacaacttttcagcccgggttattggggtgccgctgaaaaatgtctgctggtagtaagaagatt agtaaagcggaacggatgaagctgttaagagaagaggaagaacgtcgaatgctggaggaagagcaagcccgcttacgttt tgagcaggaacaagctgtgaaggccgaaaaggaacgtattgaaagagagaagacagaacgcctcgaagccaaagatcaag aacgccggggtgaggagttagatgaactttatgagttagaagagagctttttccttgccagccaatggaagctgaaaagt agagcccttgctaagtgggaacattacacaggttgtgacggcagcccagacccaactgttccccaggaaatcaacacttt tatgagtttgtggctggaagagacccagaacgatattacgacggtggtcgagaaaggcagcaaggtgctggaacttattg ccaagttagagatgtacgtgttggagaccccgtttgaagagctcccttccaaagatgtcgctcagtaccaggagacaatt gtgcaattgcagaatgtgcttcgccacaaatacaaccaagcaacagaacatctgctgaagcaagccagtagttatggaga atccgaaagtggaaatatggaactcgtcatgaaagagaaggacatgacgctgtgcctttgggccaatctcaagaagaatg caagattccggagccagatattttacgatgagaacaagcagccctgccatgcgtttgatcttcccaagccgctgaccacc tgcgacgtggccgtacgcatcttgcacacccattatgaccatttgtcgccttttcaaacgttccccagacaactcccaaa gctggacctcccgttcgcagaggaaatcactcagcccagcgaggacaaacaagtctcaagtgaagagcgggagaccctga aagacatgtctgagatcaaaacagaagcctcagccagaacgatgaccttcagcgatgtcttcagttattcagaaagaaga agaagcagcagctccaggggctctggcagtagagaagatcattacaataaaagctcctttttccttcggtccacctccag agctcatgtttcagccctgcggctctttgatatcagtgagttggatatcctggaagattacacggtggatttacaccagt tcatgccagtgggaggtgtctatcactgtgatttgctgaagctcccacctcaagccaagcaggtcaaaggatggaccatc gtggaaatcttggatacaggattagagacttacccctacactgcgacatgtgaggaatctgaagacaactcagccgtgac ggtggggatcacgatccacctgactgattccgtgatttattttgaagagccactgatagcgaggtgggataatcaagata aatactggaggaccgatgacattggggaggtggtctacagcatgaccgagaaagcaatctcctttagaatgaacggcttc ttcactgtcacgttgcttcaggatgctcacctcaacatgccgtatcaagcctgggagctccagcctgtaggccccgaccg agctatttttaccatcctcaccacctttgctgaagtccagatccacatcaaggaaagtcaatgtatgatctattctgtgg ctacagtcgaagattctgacctgcttatggggctgagagaaaaatggatgacacccatggccctcatgatggtcctgaag agagccggcatgaacatctttcccgctgaatactcctcaaagtacgtcagcgtgaacaaaaaaacgctgttggcagaaat catggtttatcagcaaatgtctcttgttgccacctcttttgcctttggctggagcaaatggaatctgaagagcggagaga ataatctggtctttaaggcctgtgaacatctgaacgaagaagaccagatccaggaagaagcatgggcgctttacatgttc agcggccaaagagctcagaagcttgccatcgatgaagacagcgatgctttctccaagaacattgcggaaggctctgaatt ccactccactctctatcatctcctgaaagatgctgggagcacagctgcaatggaccggatcacacagagcaactacctgt tcatcgatgccgtgtaccaaatgctccttgccaccagggtgctgacatactcctaacatacgccaaaaagctgcttaaga aactttattgagttcatagacactccagtcgatcagaggtggaagaaatcacacttcagacatctcttttttttaataga aaagaaaaataaaataaatatccgtaagctatttatggat |
|
| Transcript ID | habu1_s402_g01863.t2 |
| Definition | - |
>habu1_s402_g01863.t2 gaggggcggggtcatcaacaacttttcagcccgggttattggggtgccgctgaaaaatgggtcccaaaaagaaaaagtct gctggtagtaagaagattagtaaagcggaacggatgaagctgttaagagaagaggaagaacgtcgaatgctggaggaaga gcaagcccgcttacgttttgagcaggaacaagctgtgaaggccgaaaaggaacgtattgaaagagagaagacagaacgcc tcgaagccaaagatcaagaacgccggggtgaggagttagatgaactttatgagttagaagagagctttttccttgccagc caatggaagctgaaaagtagagcccttgctaagtgggaacattacacaggttgtgacggcagcccagacccaactgttcc ccaggaaatcaacacttttatgagtttgtggctggaagagacccagaacgatattacgacggtggtcgagaaaggcagca aggtgctggaacttattgccaagttagagatgtacgtgttggagaccccgtttgaagagctcccttccaaagatgtcgct cagtaccaggagacaattgtgcaattgcagaatgtgcttcgccacaaatacaaccaagcaacagaacatctgctgaagca agccagtagttatggagaatccgaaagtggaaatatggaactcgtcatgaaagagaaggacatgacgctgtgcctttggg ccaatctcaagaagaatgcaagattccggagccagatattttacgatgagaacaagcagccctgccatgcgtttgatctt cccaagccgctgaccacctgcgacgtggccgtacgcatcttgcacacccattatgaccatttgtcgccttttcaaacgtt ccccagacaactcccaaagctggacctcccgttcgcagaggaaatcactcagcccagcgaggacaaacaagtctcaagtg aagagcgggagaccctgaaagacatgtctgagatcaaaacagaagcctcagccagaacgatgaccttcagcgatgtcttc agttattcagaaagaagaagaagcagcagctccaggggctctggcagtagagaagatcattacaataaaagctccttttt ccttcggtccacctccagagctcatgtttcagccctgcggctctttgatatcagtgagttggatatcctggaagattaca cggtggatttacaccagttcatgccagtgggaggtgtctatcactgtgatttgctgaagctcccacctcaagccaagcag gtcaaaggatggaccatcgtggaaatcttggatacaggattagagacttacccctacactgcgacatgtgaggaatctga agacaactcagccgtgacggtggggatcacgatccacctgactgattccgtgatttattttgaagagccactgatagcga ggtgggataatcaagataaatactggaggaccgatgacattggggaggtggtctacagcatgaccgagaaagcaatctcc tttagaatgaacggcttcttcactgtcacgttgcttcaggatgctcacctcaacatgccgtatcaagcctgggagctcca gcctgtaggccccgaccgagctatttttaccatcctcaccacctttgctgaagtccagatccacatcaaggaaagtcaat gtatgatctattctgtggctacagtcgaagattctgacctgcttatggggctgagagaaaaatggatgacacccatggcc ctcatgatggtcctgaagagagccggcatgaacatctttcccgctgaatactcctcaaagtacgtcagcgtgaacaaaaa aacgctgttggcagaaatcatggtttatcagcaaatgtctcttgttgccacctcttttgcctttggctggagcaaatgga atctgaagagcggagagaataatctggtctttaaggcctgtgaacatctgaacgaagaagaccagatccaggaagaagca tgggcgctttacatgttcagcggccaaagagctcagaagcttgccatcgatgaagacagcgatgctttctccaagaacat tgcggaaggctctgaattccactccactctctatcatctcctgaaagatgctgggagcacagctgcaatggaccggatca cacagagcaactacctgttcatcgatgccgtgtaccaaatgctccttgccaccagggtgctgacatactcctaacatacg ccaaaaagctgcttaagaaactttattgagttcatagacactccagtcgatcagaggtggaagaaatcacacttcagaca tctcttttttttaatagaaaagaaaaataaaataaatatccgtaagctatttatggat |
|
| Transcript ID | habu1_s402_g01863.t3 |
| Definition | - |
>habu1_s402_g01863.t3 ctcgtgaactgcagttggtggatctggtacctccgtccccattgaggctataaaaataacccggatttcttaattttttt atctgccttttcccctaaaaatgttttatttccatttggggatgctcagttaattgggtttgagttaattcaagaatcca attgagtgtttgtgtgaacacagccagtcggttgatgtctgctggtagtaagaagattagtaaagcggaacggatgaagc tgttaagagaagaggaagaacgtcgaatgctggaggaagagcaagcccgcttacgttttgagcaggaacaagctgtgaag gccgaaaaggaacgtattgaaagagagaagacagaacgcctcgaagccaaagatcaagaacgccggggtgaggagttaga tgaactttatgagttagaagagagctttttccttgccagccaatggaagctgaaaagtagagcccttgctaagtgggaac attacacaggttgtgacggcagcccagacccaactgttccccaggaaatcaacacttttatgagtttgtggctggaagag acccagaacgatattacgacggtggtcgagaaaggcagcaaggtgctggaacttattgccaagttagagatgtacgtgtt ggagaccccgtttgaagagctcccttccaaagatgtcgctcagtaccaggagacaattgtgcaattgcagaatgtgcttc gccacaaatacaaccaagcaacagaacatctgctgaagcaagccagtagttatggagaatccgaaagtggaaatatggaa ctcgtcatgaaagagaaggacatgacgctgtgcctttgggccaatctcaagaagaatgcaagattccggagccagatatt ttacgatgagaacaagcagccctgccatgcgtttgatcttcccaagccgctgaccacctgcgacgtggccgtacgcatct tgcacacccattatgaccatttgtcgccttttcaaacgttccccagacaactcccaaagctggacctcccgttcgcagag gaaatcactcagcccagcgaggacaaacaagtctcaagtgaagagcgggagaccctgaaagacatgtctgagatcaaaac agaagcctcagccagaacgatgaccttcagcgatgtcttcagttattcagaaagaagaagaagcagcagctccaggggct ctggcagtagagaagatcattacaataaaagctcctttttccttcggtccacctccagagctcatgtttcagccctgcgg ctctttgatatcagtgagttggatatcctggaagattacacggtggatttacaccagttcatgccagtgggaggtgtcta tcactgtgatttgctgaagctcccacctcaagccaagcaggtcaaaggatggaccatcgtggaaatcttggatacaggat tagagacttacccctacactgcgacatgtgaggaatctgaagacaactcagccgtgacggtggggatcacgatccacctg actgattccgtgatttattttgaagagccactgatagcgaggtgggataatcaagataaatactggaggaccgatgacat tggggaggtggtctacagcatgaccgagaaagcaatctcctttagaatgaacggcttcttcactgtcacgttgcttcagg atgctcacctcaacatgccgtatcaagcctgggagctccagcctgtaggccccgaccgagctatttttaccatcctcacc acctttgctgaagtccagatccacatcaaggaaagtcaatgtatgatctattctgtggctacagtcgaagattctgacct gcttatggggctgagagaaaaatggatgacacccatggccctcatgatggtcctgaagagagccggcatgaacatctttc ccgctgaatactcctcaaagtacgtcagcgtgaacaaaaaaacgctgttggcagaaatcatggtttatcagcaaatgtct cttgttgccacctcttttgcctttggctggagcaaatggaatctgaagagcggagagaataatctggtctttaaggcctg tgaacatctgaacgaagaagaccagatccaggaagaagcatgggcgctttacatgttcagcggccaaagagctcagaagc ttgccatcgatgaagacagcgatgctttctccaagaacattgcggaaggctctgaattccactccactctctatcatctc ctgaaagatgctgggagcacagctgcaatggaccggatcacacagagcaactacctgttcatcgatgccgtgtaccaaat gctccttgccaccagggtgctgacatactcctaacatacgccaaaaagctgcttaagaaactttattgagttcatagaca ctccagtcgatcagaggtggaagaaatcacacttcagacatctcttttttttaatagaaaagaaaaataaaataaatatc cgtaagctatttatggat |
|
Protein
| Protein ID | habu1_s402_g01863.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01863.t1 MSAGSKKISKAERMKLLREEEERRMLEEEQARLRFEQEQAVKAEKERIEREKTERLEAKDQERRGEELDELYELEESFFL ASQWKLKSRALAKWEHYTGCDGSPDPTVPQEINTFMSLWLEETQNDITTVVEKGSKVLELIAKLEMYVLETPFEELPSKD VAQYQETIVQLQNVLRHKYNQATEHLLKQASSYGESESGNMELVMKEKDMTLCLWANLKKNARFRSQIFYDENKQPCHAF DLPKPLTTCDVAVRILHTHYDHLSPFQTFPRQLPKLDLPFAEEITQPSEDKQVSSEERETLKDMSEIKTEASARTMTFSD VFSYSERRRSSSSRGSGSREDHYNKSSFFLRSTSRAHVSALRLFDISELDILEDYTVDLHQFMPVGGVYHCDLLKLPPQA KQVKGWTIVEILDTGLETYPYTATCEESEDNSAVTVGITIHLTDSVIYFEEPLIARWDNQDKYWRTDDIGEVVYSMTEKA ISFRMNGFFTVTLLQDAHLNMPYQAWELQPVGPDRAIFTILTTFAEVQIHIKESQCMIYSVATVEDSDLLMGLREKWMTP MALMMVLKRAGMNIFPAEYSSKYVSVNKKTLLAEIMVYQQMSLVATSFAFGWSKWNLKSGENNLVFKACEHLNEEDQIQE EAWALYMFSGQRAQKLAIDEDSDAFSKNIAEGSEFHSTLYHLLKDAGSTAAMDRITQSNYLFIDAVYQMLLATRVLTYS |
|
| Protein ID | habu1_s402_g01863.t2 |
| Definition | - |
>habu1_s402_g01863.t2 MGPKKKKSAGSKKISKAERMKLLREEEERRMLEEEQARLRFEQEQAVKAEKERIEREKTERLEAKDQERRGEELDELYEL EESFFLASQWKLKSRALAKWEHYTGCDGSPDPTVPQEINTFMSLWLEETQNDITTVVEKGSKVLELIAKLEMYVLETPFE ELPSKDVAQYQETIVQLQNVLRHKYNQATEHLLKQASSYGESESGNMELVMKEKDMTLCLWANLKKNARFRSQIFYDENK QPCHAFDLPKPLTTCDVAVRILHTHYDHLSPFQTFPRQLPKLDLPFAEEITQPSEDKQVSSEERETLKDMSEIKTEASAR TMTFSDVFSYSERRRSSSSRGSGSREDHYNKSSFFLRSTSRAHVSALRLFDISELDILEDYTVDLHQFMPVGGVYHCDLL KLPPQAKQVKGWTIVEILDTGLETYPYTATCEESEDNSAVTVGITIHLTDSVIYFEEPLIARWDNQDKYWRTDDIGEVVY SMTEKAISFRMNGFFTVTLLQDAHLNMPYQAWELQPVGPDRAIFTILTTFAEVQIHIKESQCMIYSVATVEDSDLLMGLR EKWMTPMALMMVLKRAGMNIFPAEYSSKYVSVNKKTLLAEIMVYQQMSLVATSFAFGWSKWNLKSGENNLVFKACEHLNE EDQIQEEAWALYMFSGQRAQKLAIDEDSDAFSKNIAEGSEFHSTLYHLLKDAGSTAAMDRITQSNYLFIDAVYQMLLATR VLTYS |
|
| Protein ID | habu1_s402_g01863.t3 |
| Definition | - |
>habu1_s402_g01863.t3 MKLLREEEERRMLEEEQARLRFEQEQAVKAEKERIEREKTERLEAKDQERRGEELDELYELEESFFLASQWKLKSRALAK WEHYTGCDGSPDPTVPQEINTFMSLWLEETQNDITTVVEKGSKVLELIAKLEMYVLETPFEELPSKDVAQYQETIVQLQN VLRHKYNQATEHLLKQASSYGESESGNMELVMKEKDMTLCLWANLKKNARFRSQIFYDENKQPCHAFDLPKPLTTCDVAV RILHTHYDHLSPFQTFPRQLPKLDLPFAEEITQPSEDKQVSSEERETLKDMSEIKTEASARTMTFSDVFSYSERRRSSSS RGSGSREDHYNKSSFFLRSTSRAHVSALRLFDISELDILEDYTVDLHQFMPVGGVYHCDLLKLPPQAKQVKGWTIVEILD TGLETYPYTATCEESEDNSAVTVGITIHLTDSVIYFEEPLIARWDNQDKYWRTDDIGEVVYSMTEKAISFRMNGFFTVTL LQDAHLNMPYQAWELQPVGPDRAIFTILTTFAEVQIHIKESQCMIYSVATVEDSDLLMGLREKWMTPMALMMVLKRAGMN IFPAEYSSKYVSVNKKTLLAEIMVYQQMSLVATSFAFGWSKWNLKSGENNLVFKACEHLNEEDQIQEEAWALYMFSGQRA QKLAIDEDSDAFSKNIAEGSEFHSTLYHLLKDAGSTAAMDRITQSNYLFIDAVYQMLLATRVLTYS |
|