Gene
| Gene Model ID | habu1_s402_g01866 |
|---|---|
| Locus | habu1_scaffold402 : 301559 ... 336215 : - |
| To GenomeBrowser | habu1_scaffold402:301559..336215 |
| Genes list of scaffold | habu1_scaffold402 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glycogen | EC:2.4.1.11 GO:0004373 GO:0005978 GO:0005982 GO:0005985 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402_g01866.t1 | 1 | 1 | Glycogen_syn | 32 | 662 | 0.0 | 1165.4 | 0.0 | 0.0 | 1165.1 |
| habu1_s402_g01866.t1 | 1 | 1 | Glyco_transf_5 | 33 | 266 | 9.3e-11 | 41.6 | 4.7e-14 | 1.8e-10 | 40.7 |
| habu1_s402_g01866.t1 | 1 | 1 | Glycos_transf_1 | 493 | 572 | 7.7e-07 | 28.6 | 1.4e-08 | 5.1e-05 | 22.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s402_g01866.t1 | gi|327272072|ref|XP_003220810.1| | PREDICTED: glycogen [starch] synthase, liver [Anolis carolinensis] | 0.0 |
| habu1_s402_g01866.t1 | gi|602641288|ref|XP_007427449.1| | PREDICTED: glycogen [starch] synthase, liver [Python bivittatus] | 0.0 |
| habu1_s402_g01866.t1 | gi|701303053|ref|XP_010012118.1| | PREDICTED: glycogen [starch] synthase, liver isoform X1 [Nestor notabilis] | 0.0 |
| habu1_s402_g01866.t1 | gi|700397224|ref|XP_009939290.1| | PREDICTED: glycogen [starch] synthase, liver isoform X1 [Opisthocomus hoazin] | 0.0 |
| habu1_s402_g01866.t1 | gi|701303055|ref|XP_010012119.1| | PREDICTED: glycogen [starch] synthase, liver isoform X2 [Nestor notabilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.3 |
| Nose | 0.3 |
| Brain-1 | 0.0 |
| Eye | 0.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 0.2 |
| Lung | 0.3 |
| Liver | 91.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 0.3 |
| heart | 0.1 |
| ovary | 0.4 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s402_g01866.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01866.t1 ttgccttgggagagagcaaggagcaaaatgccactcgtccgatccctttcggtcacttctctcaatggtctccctcaatg ggacagcgaagatttaccggtagaagaccttctactctttgaagtctcctgggaagtcaccaataaagtcggtggcatct gcacggtgatccagacaaaagccaaaactactttagaagaatggggggagaattactttctccttggcccttatttcgag cacaatgtaaagacacaagtggaactttgtgaacctcccaacgcggcagtgaagaaggccatggatgtgataaaagccaa tgggtatcaggtccatttcgggagatggctgattgaaggaagcccatatgtggtgctgttcgatatagcatcagcagctt ggaatctggatcgatggaaaggagaattctgggacgccggccatattggaattccttaccatgacagagaagcaaatgat gttctcatcttcggatcgctaattgcctggtttttgaaagagcttgccagtcagtttgaagaaaagcccaacgttatagc tcacttccatgaatggcaaacgggccccggactcatcctgtgccggtccaggaagattccagttgccaccattttcacaa cacatgcaaccctgttaggaaggtacctctgtgcagccagcatagacttctacaatcatttggatcagtttgatatagat aaagaagcaggggaaagggagatataccacaggtactgcatggagcgggcatctgtgcattgtgcccatgtcttcaccac ggtctctcagataacggccatagaagcggagcacatgttgaagagagcaactgatgttgtcacgcccaatggcctaaaca ttaagaaattctcggctatgcatgaatttcagaacttgcacgccaccaataaagccaggatccaagagttcgttcgaggt catttctacggccatcttgatttcaaccttgaaaagactttgtttttcttcattgccgggagatacgagttttcaaacaa aggagcagacatgtttttggaggccttatcaagattaaatttcctactgagggtgcacagaagtgatgtcacagtcattg tattctttataatgccggcaaaaaccaacaatttcaacgtggagacactgaaaggccaggcagtccggaaacagctttgg gacaccgcacattcagtgaaggaaaaatttggtaagaaactctatgaagcactgctaagaggagaaattcctgacatgaa caagatcatagatcgtgatgacctaactattatgaaacgagccatctattccacccagcggcagagcctcccacccgtga caacacacaacatgatcgatgactccggcgatcccatcctgagcaccatcagacggatcggtttgttcaataatcggacg gatcgagttaaggtaatcctgcatcccgaatttctttcttcaaccagtccattattaccaatggactatgaagagtttgt cagaggctgccatcttggggtctttccatcctattatgaaccctgggggtatacgccagctgaatgcaccgtcatgggca tccccagcgttaccacgaacctgtcgggatttggctgtttcatgcaggaacatgtagctgacccagctgcttatggcatt tacattgtggaccggcaattccgttctccggacgagtcttgcaatcagctgacccagttcctgtatgcattctgccaaca gtcaagacgacaaagaattgtccagaggaaccgaacagaaaggctttcagatctgctggactggagatatttagggagat attatatgcatgccaggcacttagctctgagccggacttttcctgaaaaatttgagatggaaccaaatgccccacccaag accgagggttttcgttatccacgtccttcatcggttcctccctcgccttccgtttctcagcacaacagcccccaccagag cgatgaggaagtggaagatgatgaaagatacgacgaggaggaagaagctgagagggacaggcagaacataaaatccccct tctccttcaccgctatgccaacgaggaagaagaaacagcacggggaatacaggaactaatccatccaatccttcattcat ggccttgagttggtgctacttcctcagatatacacatgtcaacctagagcaggggtaggcaaccttggctcttttatgac tcgtggacttcaactcccagaattcctgagccagccatgctgaggggaaagggaaaggtttcgaagctgagccattctgg ctcaggaattctgggagttgaagtccataagtcataaaagggccaaggttgcctacccct |
|
Protein
| Protein ID | habu1_s402_g01866.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01866.t1 MPLVRSLSVTSLNGLPQWDSEDLPVEDLLLFEVSWEVTNKVGGICTVIQTKAKTTLEEWGENYFLLGPYFEHNVKTQVEL CEPPNAAVKKAMDVIKANGYQVHFGRWLIEGSPYVVLFDIASAAWNLDRWKGEFWDAGHIGIPYHDREANDVLIFGSLIA WFLKELASQFEEKPNVIAHFHEWQTGPGLILCRSRKIPVATIFTTHATLLGRYLCAASIDFYNHLDQFDIDKEAGEREIY HRYCMERASVHCAHVFTTVSQITAIEAEHMLKRATDVVTPNGLNIKKFSAMHEFQNLHATNKARIQEFVRGHFYGHLDFN LEKTLFFFIAGRYEFSNKGADMFLEALSRLNFLLRVHRSDVTVIVFFIMPAKTNNFNVETLKGQAVRKQLWDTAHSVKEK FGKKLYEALLRGEIPDMNKIIDRDDLTIMKRAIYSTQRQSLPPVTTHNMIDDSGDPILSTIRRIGLFNNRTDRVKVILHP EFLSSTSPLLPMDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMQEHVADPAAYGIYIVDRQFRS PDESCNQLTQFLYAFCQQSRRQRIVQRNRTERLSDLLDWRYLGRYYMHARHLALSRTFPEKFEMEPNAPPKTEGFRYPRP SSVPPSPSVSQHNSPHQSDEEVEDDERYDEEEEAERDRQNIKSPFSFTAMPTRKKKQHGEYRN |
|