Gene
| Gene Model ID | habu1_s402_g01868 |
|---|---|
| Locus | habu1_scaffold402 : 349256 ... 424175 : - |
| To GenomeBrowser | habu1_scaffold402:349256..424175 |
| Genes list of scaffold | habu1_scaffold402 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| l-lactate dehydrogenase b chain isoform x1 | EC:1.1.1.27 GO:0004459 GO:0005739 GO:0006094 GO:0006096 GO:0006534 GO:0016020 GO:0044262 GO:0055114 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402_g01868.t2 | 1 | 1 | IRK | 37 | 368 | 0.0 | 525.2 | 0.0 | 0.0 | 524.6 |
| habu1_s402_g01868.t2 | 1 | 1 | Ldh_1_N | 411 | 550 | 0.0 | 172.1 | 0.0 | 0.0 | 171.2 |
| habu1_s402_g01868.t2 | 1 | 1 | Ldh_1_C | 554 | 716 | 3.1e-31 | 108.4 | 2.2e-34 | 6.4e-31 | 107.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s402_g01868.t2 | gi|602676627|ref|XP_007443776.1| | PREDICTED: ATP-sensitive inward rectifier potassium channel 8-like [Python bivittatus] | 0.0 |
| habu1_s402_g01868.t2 | gi|327272084|ref|XP_003220816.1| | PREDICTED: ATP-sensitive inward rectifier potassium channel 8 [Anolis carolinensis] | 0.0 |
| habu1_s402_g01868.t2 | gi|696954802|ref|XP_009558932.1| | PREDICTED: ATP-sensitive inward rectifier potassium channel 8 [Cuculus canorus] | 0.0 |
| habu1_s402_g01868.t2 | gi|704461405|ref|XP_010083931.1| | PREDICTED: ATP-sensitive inward rectifier potassium channel 8 [Pterocles gutturalis] | 0.0 |
| habu1_s402_g01868.t2 | gi|727059771|ref|XP_010408594.1| | PREDICTED: ATP-sensitive inward rectifier potassium channel 8 [Corvus cornix cornix] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 124.7 |
| Venom grand-1 | 308.7 |
| Pit, infrared sensing | 211.5 |
| Nose | 137.3 |
| Brain-1 | 121.2 |
| Eye | 180.1 |
| fetal fibroblast | 311.5 |
| venom gland-2 | 225.4 |
| Brain-2 | 176.5 |
| Spleen | 116.4 |
| Lung | 202.9 |
| Liver | 35.8 |
| Kidney | 509.0 |
| Pancreas | 77.3 |
| Small intestine | 475.8 |
| Large intestine | 489.7 |
| Stomach | 913.9 |
| heart | 1596.9 |
| ovary | 96.2 |
| cheek muscle | 70.9 |
Transcript
| Transcript ID | habu1_s402_g01868.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01868.t1 ggtctgcacaaacaagcaaagccccatccgcgggaggcaggcagcacacaaaaccacgcacactggtccacggaaaaacc tctctccacagaaccggtccctggtacccaaaaggttggggacctctgctctaggatgcaatcttccctgctggctttcc catccactttgcttgtcaaaagctgactgagaaagttacaaattgtgattagatgactagggattgccaagtgcccaaat catgatcacatgactgtgtggctactacgacagttgtaaatgtgagggctggtcataagtcattttttttagcactgtta cagctttcagcagtataaaacagatctgaaaactaaatactaaacaattgggacctggaaatctgccaatctattgcaga tctcccagacctaattttaattttgctaattcctgttttgaaggataccactggtttgaaagtcaatcttaacagtatcc tttggtctaccgtagcatccagagctatttttgtcctcattatcagtaaaatgcagatggtattataaaaacctctgggg attattccagttcatgcgtgcaaagttctgtctgtttgttttacaattcttcatctctgcacgcatgctttgatctttgg ccttaggtggtagtctttgacctacctacagaatattgtatcttgttttctttaacttaatggagtttatagtattaatt ttcaggaacatttggcgttttgcattgattgcatttcaatgattgccttgtcaaaatgggagatagttaaatgcttgtgt tatttctggagtttgaaagcaatggcttccctcaaggacaaactgattaccccaattacccagcccagcactcaaccgaa caacaaggtcaccgtggtgggagtcggccaggtggggatggcctgtgctgtcagtgtcctggaaaagggtctctgcgatg aacttgctctcgttgatgtcctggaagacaaactgagaggagaaatgctggatctacaacatggaagcttatttctgaag acacctaagattgtagcagacaaggattattcggtgaccgctaattcaaaagtggtggttgtaaccgccggtgtccgtca gcaggaaggagaaagccgtcttgatttagttcagaggaacgtaaacgtcttcaagttcatcattccccaagttgtgaaat acagcccaaattgcatcattctggtggtgtcaaacccagtggatatcctgacctacgtcacatggaaacttagtggcctg ccgaagcatcgtgtcattggtagcggttgtaaccttgattctgctcgattccgctttttgatggcagaaaaattgggcat ccatccttccagctgtcacggttgggtgttgggcgaacatggtgattccagtgtaccgatctggagtggggtcaacgtag ccggtgtttgtctccaggatttgaacccacaattggggactgatcaagatccggaggagtggaagaaagtgcacaagcag gtggttgagagtgcttacgaagtgatcaaactgaaaggctacaccaactgggccattggctttagtgttgctgatcttct agaaaccattctgaagaacctttctcgagtccacccagtgtctaccatggtaaagggtatgtatggcattgaaaatgaag tgttcctgagccttccttgcgtgctgggatctgtagggttgaccagtgtgatcaatcaaaagctgaaggataacgaagtg gctcagctccagaacagcgcctctacgttgtggaatgtccaaaaggaccttaaagatctgtaggcactcgagatgcttcc tttccccataactaagaagacaagcagtgttaagccgacatgttcatgttaactccatagctgagcttccagtaaaacac cttgaaaaggtatcagct |
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| Transcript ID | habu1_s402_g01868.t2 |
| Definition | - |
>habu1_s402_g01868.t2 tgccgtcctggccccgcccacccagtctgccatgaccaccgcggccacgcccacccggcacccggtgataaataaatggg ttttgggttgcaatttgggcactgggtctctaaaaggatttgagaagaataaaaggagtcttttgtatgccatttgctgg gctatggtggcaggaagatgttggccagaaaaagcatcattccagaagagtatgttcttgcccgcattgcagctgagaat ttgggcaagccccgcattcgagaccgccagcgcaaagcccgcttcattgccaaaaacggcgcgtgcaacctggctcacaa gaacatccgtgagcagggacgcttcctgcaggacatcttcaccaccttggtggacctgaaatggcgccacactttggtga tcttcaccatgtccttcctctgcagctggttgttcttcgccatgatgtggtggctggtggctttcgcccatggagacatg gacaagccttgcaccaatgaagaaatcagcaaatggaaaccttgtatcacctgtgtcaggtccttcatctctgctttcct cttctccattgaggtccaggtgaccattggtttcggtggaaggatgatgaccgaagaatgtcccatcgccatcagtgttt tgatccttcaaaacattgtgggcttgatcatcaatgcagtcatgctaggctgcatctttatgaaaaccgcccaagcccac cggagagcagaaactttgattttcagtcggaacgccgtcatcgccgtccgtaatggccacctgtgtttcatgttccgcgt aggggacctgaggaaaagcatgatcattagtgcctcggtacgaatccaggttgtcaagaagaccaccactccagaaggag aagtcatcccaatccaccagcttgatgttccggtagacaatcctcttgaaaacaacaatattttcctggtggctccgttg atcgtttgccacgtcattgataagcggagtcctctttatgacatttcctccaatgacctggccaaccaagacctagaaat cattgtcatacttgaaggtgtggtggaaaccactggaatcaccacccaagccagaacatcctacatatcagaagagatcc tctggggtcatcgctttgtgcccatcgtcactgaagaggaagggacttacgctgtcgactactccaaatttggcaacacc agcaaagtcgcggcgccccgctgcagtgccaaggaactggatgagaagccctccattctcatccagaccctccagaaaaa ttgtaagccttttgaggcagcgaccatgtcagttctgtgttgcctgtctgttgtggttgctaaagcaatggcttccctca aggacaaactgattaccccaattacccagcccagcactcaaccgaacaacaaggtcaccgtggtgggagtcggccaggtg gggatggcctgtgctgtcagtgtcctggaaaagggtctctgcgatgaacttgctctcgttgatgtcctggaagacaaact gagaggagaaatgctggatctacaacatggaagcttatttctgaagacacctaagattgtagcagacaaggattattcgg tgaccgctaattcaaaagtggtggttgtaaccgccggtgtccgtcagcaggaaggagaaagccgtcttgatttagttcag aggaacgtaaacgtcttcaagttcatcattccccaagttgtgaaatacagcccaaattgcatcattctggtggtgtcaaa cccagtggatatcctgacctacgtcacatggaaacttagtggcctgccgaagcatcgtgtcattggtagcggttgtaacc ttgattctgctcgattccgctttttgatggcagaaaaattgggcatccatccttccagctgtcacggttgggtgttgggc gaacatggtgattccagtgtaccgatctggagtggggtcaacgtagccggtgtttgtctccaggatttgaacccacaatt ggggactgatcaagatccggaggagtggaagaaagtgcacaagcaggtggttgagagtgcttacgaagtgatcaaactga aaggctacaccaactgggccattggctttagtgttgctgatcttctagaaaccattctgaagaacctttctcgagtccac ccagtgtctaccatggtaaagggtatgtatggcattgaaaatgaagtgttcctgagccttccttgcgtgctgggatctgt agggttgaccagtgtgatcaatcaaaagctgaaggataacgaagtggctcagctccagaacagcgcctctacgttgtgga atgtccaaaaggaccttaaagatctgtaggcactcgagatgcttcctttccccataactaagaagacaagcagtgttaag ccgacatgttcatgttaactccatagctgagcttccagtaaaacaccttgaaaaggtatcagct |
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Protein
| Protein ID | habu1_s402_g01868.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01868.t1 MASLKDKLITPITQPSTQPNNKVTVVGVGQVGMACAVSVLEKGLCDELALVDVLEDKLRGEMLDLQHGSLFLKTPKIVAD KDYSVTANSKVVVVTAGVRQQEGESRLDLVQRNVNVFKFIIPQVVKYSPNCIILVVSNPVDILTYVTWKLSGLPKHRVIG SGCNLDSARFRFLMAEKLGIHPSSCHGWVLGEHGDSSVPIWSGVNVAGVCLQDLNPQLGTDQDPEEWKKVHKQVVESAYE VIKLKGYTNWAIGFSVADLLETILKNLSRVHPVSTMVKGMYGIENEVFLSLPCVLGSVGLTSVINQKLKDNEVAQLQNSA STLWNVQKDLKDL |
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| Protein ID | habu1_s402_g01868.t2 |
| Definition | - |
>habu1_s402_g01868.t2 MLARKSIIPEEYVLARIAAENLGKPRIRDRQRKARFIAKNGACNLAHKNIREQGRFLQDIFTTLVDLKWRHTLVIFTMSF LCSWLFFAMMWWLVAFAHGDMDKPCTNEEISKWKPCITCVRSFISAFLFSIEVQVTIGFGGRMMTEECPIAISVLILQNI VGLIINAVMLGCIFMKTAQAHRRAETLIFSRNAVIAVRNGHLCFMFRVGDLRKSMIISASVRIQVVKKTTTPEGEVIPIH QLDVPVDNPLENNNIFLVAPLIVCHVIDKRSPLYDISSNDLANQDLEIIVILEGVVETTGITTQARTSYISEEILWGHRF VPIVTEEEGTYAVDYSKFGNTSKVAAPRCSAKELDEKPSILIQTLQKNCKPFEAATMSVLCCLSVVVAKAMASLKDKLIT PITQPSTQPNNKVTVVGVGQVGMACAVSVLEKGLCDELALVDVLEDKLRGEMLDLQHGSLFLKTPKIVADKDYSVTANSK VVVVTAGVRQQEGESRLDLVQRNVNVFKFIIPQVVKYSPNCIILVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARF RFLMAEKLGIHPSSCHGWVLGEHGDSSVPIWSGVNVAGVCLQDLNPQLGTDQDPEEWKKVHKQVVESAYEVIKLKGYTNW AIGFSVADLLETILKNLSRVHPVSTMVKGMYGIENEVFLSLPCVLGSVGLTSVINQKLKDNEVAQLQNSASTLWNVQKDL KDL |
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