Gene
| Gene Model ID | habu1_s402_g01870 |
|---|---|
| Locus | habu1_scaffold402 : 518955 ... 538061 : + |
| To GenomeBrowser | habu1_scaffold402:518955..538061 |
| Genes list of scaffold | habu1_scaffold402 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| n-acylneuraminate cytidylyltransferase | GO:0005634 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s402_g01870.t1 | 1 | 1 | CTP_transf_3 | 30 | 253 | 0.0 | 180.4 | 0.0 | 0.0 | 179.9 |
| habu1_s402_g01870.t1 | 1 | 1 | NTP_transf_3 | 49 | 159 | 4.4e-06 | 26.8 | 1.4e-09 | 6.8e-06 | 26.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s402_g01870.t1 | gi|602663659|ref|XP_007437457.1| | PREDICTED: N-acylneuraminate cytidylyltransferase [Python bivittatus] | 0.0 |
| habu1_s402_g01870.t1 | gi|327272120|ref|XP_003220834.1| | PREDICTED: N-acylneuraminate cytidylyltransferase isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s402_g01870.t1 | gi|637299191|ref|XP_008108539.1| | PREDICTED: N-acylneuraminate cytidylyltransferase isoform X3 [Anolis carolinensis] | 0.0 |
| habu1_s402_g01870.t1 | gi|637299187|ref|XP_008108538.1| | PREDICTED: N-acylneuraminate cytidylyltransferase isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s402_g01870.t1 | gi|348569418|ref|XP_003470495.1| | PREDICTED: N-acylneuraminate cytidylyltransferase [Cavia porcellus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.6 |
| Venom grand-1 | 2.3 |
| Pit, infrared sensing | 2.6 |
| Nose | 6.3 |
| Brain-1 | 1.9 |
| Eye | 2.3 |
| fetal fibroblast | 6.4 |
| venom gland-2 | 12.1 |
| Brain-2 | 2.5 |
| Spleen | 0.9 |
| Lung | 1.1 |
| Liver | 1.4 |
| Kidney | 1.5 |
| Pancreas | 0.6 |
| Small intestine | 0.9 |
| Large intestine | 1.9 |
| Stomach | 3.3 |
| heart | 1.2 |
| ovary | 1.6 |
| cheek muscle | 2.3 |
Transcript
| Transcript ID | habu1_s402_g01870.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01870.t1 gcagggcggctatgttcattctgtcagaaaaccatggctgcgacggctggggattctccttcgctcgctgtctcctcttc ccggccgtcgggtgatgccgacgcggggtcccctcacatagcggcgctgatcctggctcgaggcggcagcaaaggaatcc ctctgaagaacattaagctcctggctggcgttccgctgattggttgggtactgagggcagcgctcgactccggcgccttt cagagcgtgtgggtttccacagatcatgatgaaattgagaaaactgccaaacagtttggagcccaggtccatcggaggac ctctgaagtgtctaaagattcctctacttctttggacaccattgtggagtttctccaatatcacgaggaggttgatgttg taggaaacatccaagcgacttccccatgcctgcatcccaccgacctcaccaaagtggtcaaaatgatccgggaggacggc tttgactcggtgttttccgttgtccggcggcaccagttcagatggagtgaaattaaaaaaggagtcagtgaagtaactgt cccgcaaaatctgaatcctgccaagcgtccccgacggcaggactgggatggtgaattatatgaaaatggatcgttctact ttgccaaaagggccttaattgaaaagggatatttgcagggtgggaaaatggcctactacgaaatgcgagctgagcacagt gtggacatcgatgttgacatagactggcccattgcagagcagcgggtcctaagatatggctactttgggaaagagacctt aaaagaagtgaagcttctggtttgtaccattgacggatgcctcaccactggtcacctctacctctctgaagatggaaaag agatggtttcatatgacgtcagagatgctgttggaataagtcagcttcagaaaagaggagtcgaggtgcggctgatctcc gagcgggtctcttccgccaaggcgctcttcacctcgaagttgggctgcaccctggaagtcggggtgatagacaagctggg tgtcgtggagaaatggcggaaggccatggggctgtgctggaaggaggttgcgtacttaggaaatgaagactcggatgtgg agtgtctgaagaaagccagcatgagtgccgtccctgctgacgcttgtccgacttcccagaaagctgcaagctacatttgt cgatgtaatggcggccgtggcgcggttcgagagttcgccgagcacatcctccttttaatggaaaaggtgaattcggcggg gaaaaacgtggggtgatccagctaggaagtcgcctccctgattccgctggggtgacttttccctgcttggcttttgacat ttccagcatccaaaggaccccgacaggcagctttaaaatatccgctttattatttcactggtgacgaaatcgttcatgaa ttgacgcagacccaaggtggcaggaaaacccaataaatccaaagacacgctattgccgg |
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Protein
| Protein ID | habu1_s402_g01870.t1 |
|---|---|
| Definition | - |
>habu1_s402_g01870.t1 MAATAGDSPSLAVSSSRPSGDADAGSPHIAALILARGGSKGIPLKNIKLLAGVPLIGWVLRAALDSGAFQSVWVSTDHDE IEKTAKQFGAQVHRRTSEVSKDSSTSLDTIVEFLQYHEEVDVVGNIQATSPCLHPTDLTKVVKMIREDGFDSVFSVVRRH QFRWSEIKKGVSEVTVPQNLNPAKRPRRQDWDGELYENGSFYFAKRALIEKGYLQGGKMAYYEMRAEHSVDIDVDIDWPI AEQRVLRYGYFGKETLKEVKLLVCTIDGCLTTGHLYLSEDGKEMVSYDVRDAVGISQLQKRGVEVRLISERVSSAKALFT SKLGCTLEVGVIDKLGVVEKWRKAMGLCWKEVAYLGNEDSDVECLKKASMSAVPADACPTSQKAASYICRCNGGRGAVRE FAEHILLLMEKVNSAGKNVG |
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