Gene
| Gene Model ID | habu1_s403008_g25107 |
|---|---|
| Locus | habu1_scaffold403008 : 13233 ... 29079 : - |
| To GenomeBrowser | habu1_scaffold403008:13233..29079 |
| Genes list of scaffold | habu1_scaffold403008 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sarcoplasmic endoplasmic reticulum calcium atpase 2 isoform x2 | EC:3.6.3.8 GO:0002026 GO:0005388 GO:0005524 GO:0006874 GO:0006984 GO:0008022 GO:0008152 GO:0016021 GO:0019899 GO:0033017 GO:0044548 GO:0045822 GO:0046872 GO:0070588 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s403008_g25107.t1 | 1 | 1 | E1-E2_ATPase | 1 | 159 | 6.5e-38 | 130.0 | 5.19994e-41 | 1.3e-37 | 129.0 |
| habu1_s403008_g25107.t1 | 2 | 1 | Hydrolase | 164 | 181 | 1.2e-27 | 97.7 | 1.7e-06 | 0.0041 | 17.5 |
| habu1_s403008_g25107.t1 | 1 | 1 | HAD | 166 | 529 | 4.6e-15 | 56.2 | 8.9e-18 | 2.2e-14 | 54.0 |
| habu1_s403008_g25107.t1 | 1 | 1 | Hydrolase_like2 | 236 | 345 | 6.2e-22 | 77.3 | 5.0e-25 | 1.2e-21 | 76.3 |
| habu1_s403008_g25107.t1 | 2 | 2 | Hydrolase | 385 | 531 | 1.2e-27 | 97.7 | 6.4e-25 | 1.6e-21 | 77.7 |
| habu1_s403008_g25107.t1 | 1 | 1 | Cation_ATPase_C | 601 | 803 | 1.68156e-44 | 151.5 | 0.0 | 1.68156e-44 | 151.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s403008_g25107.t1 | gi|602655145|ref|XP_007433336.1| | PREDICTED: sarcoplasmic/endoplasmic reticulum calcium ATPase 2 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s403008_g25107.t1 | gi|602655143|ref|XP_007433335.1| | PREDICTED: sarcoplasmic/endoplasmic reticulum calcium ATPase 2 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s403008_g25107.t1 | gi|327276072|ref|XP_003222795.1| | PREDICTED: sarcoplasmic/endoplasmic reticulum calcium ATPase 2 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s403008_g25107.t1 | gi|637316891|ref|XP_008111922.1| | PREDICTED: sarcoplasmic/endoplasmic reticulum calcium ATPase 2 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s403008_g25107.t1 | gi|50978982|ref|NP_001003214.1| | sarcoplasmic/endoplasmic reticulum calcium ATPase 2 [Canis lupus familiaris] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 20.2 |
| Venom grand-1 | 13.1 |
| Pit, infrared sensing | 23.8 |
| Nose | 26.9 |
| Brain-1 | 33.4 |
| Eye | 22.3 |
| fetal fibroblast | 48.7 |
| venom gland-2 | 68.4 |
| Brain-2 | 40.2 |
| Spleen | 5.4 |
| Lung | 9.1 |
| Liver | 5.7 |
| Kidney | 5.8 |
| Pancreas | 3.7 |
| Small intestine | 4.8 |
| Large intestine | 7.1 |
| Stomach | 9.4 |
| heart | 249.3 |
| ovary | 54.8 |
| cheek muscle | 27.0 |
Transcript
| Transcript ID | habu1_s403008_g25107.t1 |
|---|---|
| Definition | - |
>habu1_s403008_g25107.t1 gtgaatctgtctcggttattaaacatacggaccctgtgcctgatcctcgtgcagtaaaccaagacaagaaaaatatgctt ttttctggtacgaacatttctgctggcaaagccatgggggtggtggtggccactggggtcaacacggaaatcgggaaaat ccgtgacgaaatggtggccaccgagcaagagaggacccccctgcagcagaagctggacgagtttggggagcagctctcca aggtcatctcgctgatctgcattgccgtctggatcatcaacatcggccacttcaacgaccccgtccacggcggctcctgg atccggggcgccatctactacttcaaaattgccgtggcccttgcagtggctgccattccagagggcctgcctgctgtcat caccacctgcctggccctgggcacccgtcgcatggccaagaagaatgccatcgtccggagccttccctccgtggaaaccc tgggctgcacctcggtgatctgttccgacaagactggcacgctaaccaccaaccagatgtcggtttgccggatgtttatt gtggaccgagtggaaggggatagctgctgtctgaatgaattcaccgtgtctggttcaacgtatgccccggttggagagat ttccaaaggggataaacccatcaaatgctgtatgtacgatggccttattgaattggctacaatctgcgccctttgcaacg attcatctctggatttcaatgaagtgaagggagtttatgagaaggtcggggaagccacagagacggccctgacttgtctg gtggagaagatgaacgtgtttgacacggatctgaaaggactgtccaagattgagcgggccaacgcttgcaattcggtgat taagcagctgatgaggaaagagttcactctggaattctcccgggataggaagtcgatgtccgtttactgcactccgaaca agcccagccggacggccatgaccaagatgtttgtcaagggggctccagaaggggtgcttgacaggtgcacccacttccga gcaggaaacatgaaggtgcccttaaccccggggattaagcagaagatcatgaccgtcatccgtgagtggggcagcgggaa ggacacgctgcgttgcctggccctggccacccatgacaaccctccaagaaaggaagatatgaacctggaagattctgcag gcttcatcagctacgagacccacctgaccttcgtgggctgcgtgggaatgctggacccgccccgaattgaggtggcctca tccatcaagctgtgccggcaagcgggcattcgtgtgatcatgataaccggcgacaacaaggggacggcggtggccatctg tcggcgcattggcattttcggcgaagacgaggacgtcaccacaaaagccttcaccggtcgggagtttgatgagctttcgc cagccggccagagagacgcctgcatgaacgcccgctgcttcgcccgcgtggaaccctcccacaagtccaaaatcgtggag tttctccagtcctttgatgacatcacagcaatgacaggagacggcgtaaacgatgcccccgctttgaagaaggcagagat cggaattgccatgggatctggcacggccgtggcgaagacggcctctgaaatggtgctggcggacgacaatttctccacca ttgtagccgctgtggaggaaggccgggccatctataacaatatgaagcaatttattcgctacctcatctcctccaacgtt ggagaagtggtctgcatcttcctaaccgctgcactgggcttcccggaagctttaatccctgtccagctgttatgggtaaa ccttgtgaccgacggacttcctgccaccgccctgggcttcaacccgcctgatctggatatcatgagcaagccacctcgta accccaaagagcccctaatctcaggatggctctttttccgctacttggcgattggatgttacgtcggagctgccactgtg ggcgctgcagcttggtggttcatagctgctgatgggggcccgagaattacctactaccagctgagtcatttcctgcagtg caaagacgacaatccagagtttgaaggggtcgactgtgtggtgtttgagtctccctatcctatgacaatggcgctctctg tcttggtcacaatagaaatgtgcaacgctctcaacagcctctcggagaaccagtccttgctaaggatgcctccatgggag aacgtctggctcctgggatccatttgcttgtccatgtctcttcacttcctcatcctttatgtagaaccattgccactgat tttccagatcacccccctgaacgtgacccagtggctgatggtgctcaagctctccctgccggtgatcctgctagacgaga ctcttaagtttgtggcgcgcacttacctagagccggtgatgctggagtaaatcatttagtcctaaaccaattgttgcaga attgtaaggttaattttcttgcatgtgtctttagcaacgcatctgctgaaaacatctgcatgagtcttgtacatggaaaa aaaaactttaaaaagccttcccgaaagcgaaggagaaaaaaaaaattgaactgcaaacttgtgttccgtgaaggaagtgt gtggtgctcttacaactaaagtttatatacagatctaccaaaatgtgcactatagtttttaactgataaaacagacctct gcaaaagatgtt |
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Protein
| Protein ID | habu1_s403008_g25107.t1 |
|---|---|
| Definition | - |
>habu1_s403008_g25107.t1 ESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNISAGKAMGVVVATGVNTEIGKIRDEMVATEQERTPLQQKLDEFGEQLSK VISLICIAVWIINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETL GCTSVICSDKTGTLTTNQMSVCRMFIVDRVEGDSCCLNEFTVSGSTYAPVGEISKGDKPIKCCMYDGLIELATICALCND SSLDFNEVKGVYEKVGEATETALTCLVEKMNVFDTDLKGLSKIERANACNSVIKQLMRKEFTLEFSRDRKSMSVYCTPNK PSRTAMTKMFVKGAPEGVLDRCTHFRAGNMKVPLTPGIKQKIMTVIREWGSGKDTLRCLALATHDNPPRKEDMNLEDSAG FISYETHLTFVGCVGMLDPPRIEVASSIKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGEDEDVTTKAFTGREFDELSP AGQRDACMNARCFARVEPSHKSKIVEFLQSFDDITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTI VAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMSKPPRN PKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRITYYQLSHFLQCKDDNPEFEGVDCVVFESPYPMTMALSV LVTIEMCNALNSLSENQSLLRMPPWENVWLLGSICLSMSLHFLILYVEPLPLIFQITPLNVTQWLMVLKLSLPVILLDET LKFVARTYLEPVMLE |
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