Gene
| Gene Model ID | habu1_s403020_g25129 |
|---|---|
| Locus | habu1_scaffold403020 : 4819 ... 46575 : - |
| To GenomeBrowser | habu1_scaffold403020:4819..46575 |
| Genes list of scaffold | habu1_scaffold403020 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| histone deacetylase 3 | EC:3.5.1.98 GO:0000118 GO:0000122 GO:0000785 GO:0003714 GO:0005667 GO:0005876 GO:0007346 GO:0016481 GO:0017053 GO:0030332 GO:0031490 GO:0032041 GO:0032922 GO:0040014 GO:0042826 GO:0046329 GO:0046969 GO:0046970 GO:0051225 GO:0061647 GO:0070932 GO:0070933 GO:0097372 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s403020_g25129.t2 | 1 | 1 | Hist_deacetyl | 18 | 318 | 0.0 | 258.0 | 0.0 | 0.0 | 257.3 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.9 |
| Venom grand-1 | 12.5 |
| Pit, infrared sensing | 10.2 |
| Nose | 11.9 |
| Brain-1 | 10.1 |
| Eye | 7.5 |
| fetal fibroblast | 30.7 |
| venom gland-2 | 21.0 |
| Brain-2 | 9.6 |
| Spleen | 11.3 |
| Lung | 8.0 |
| Liver | 23.2 |
| Kidney | 17.0 |
| Pancreas | 20.3 |
| Small intestine | 9.3 |
| Large intestine | 8.3 |
| Stomach | 11.8 |
| heart | 12.1 |
| ovary | 14.6 |
| cheek muscle | 12.1 |
Transcript
| Transcript ID | habu1_s403020_g25129.t1 |
|---|---|
| Definition | - |
>habu1_s403020_g25129.t1 gggaggtcattccgcactcaagtccttccgagggtggagggtatggcgaagactgtggcttatttctatgatcccgatgt gggcaattttcattacggagcaggacatcccatgaaaccacatcggttggcattgacccacagtttggtgctacattatg gactctataagaagatgattgtatttaagccatatcaagcttctcagcatgacatgtgtcgctttcattcagaagattat attgacttccttcagagagttagtccgaacaacatgcaaggattcaccaaaagcctcaatgctttcaatgtgggagatga ctgccctgtttttccaggactatttgaattttgttctcgatatactggagcttccttgcaaggagcaacacagctgaata ataagatttgtgatattgcaattaattgggctggaggcctgcatcatgccaagaagtttgaggcttctgggttttgttac gtgaatgacatcgtgattggcattttggagcttctcaagtaccacccacgtgtgctttacattgatatagacatccatca tggagatggtgtgcaggaagctttttacttgacagaccgtgtcatgacagtatcttttcacaaatacgggaattactttt tccctggtacaggtgacatgtatgaagttggagctgagagtggccgctattactgtctaaatgtacctttgcgggatggc attgatgaccaaagttataagcatctcttccagccagtcattaatcaagtggtggaattctatcagccaacttgcatagt gttgcagtgtggtgctgactccttaggctgtgatcgcctgggctgctttaacctcagtataagaggacatggggagtgcg tggaatatgtaaaaagtttcaacattccccttctggtattaggaggcggtggctatacagttcgcaatgtggcccgatgc tggacttatgaaacatcattgctagtagatgaagcaattagtgaggagcttccgtatagtgaatactttgaatactttgc tccagactttactctccaccctgatgtcagcactagaattgaaaatcagaactcaaggcagtacttagatcaaatacggc agacaatatttgagaatttgaagatgctgaatcatgcacctagtgtccagatccatgatgtcccttctgatcttctgagc tatgatcgcacagatgagcctgatccagaagagagaggttcagaagataattacagcaggccagaagcttccaatgagtt ctatgatggtgaccatgataatgataaagaaagtgatgttgaaatatgaggcctgaatcctataaatttatactatgtga aattgtctggatgatgagactcttaaggaggcaataggttccagcagaaagactgctctttctacccgttttctgaaatg atatcagcaggactggtaaatgatggaattatttgagcacagaaggcaatgagggttgccacttgacctgatcttcagcc attaattgtgaggaataaacattcattacttcaggttcatgtatgtatactttgttgcttggtgaccctcttcaattctc attctgcaatgaccatcactcttcacaaagctgccgctgttcaaaaaaggacaggatttgtattgtattttgaaccattt gtctttgattttcctgaaggacctaattagaaatctgttataaaaagcttgcctacgtggacatatcagtttattgcagc tatatggccagaaacagtgaaatatccaattgtaggctacttgcatacatacatatataaaaatgcactgagcatgatct aatgacaaataagaagacttataataaaattaatttttaaaaaagttatt |
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| Transcript ID | habu1_s403020_g25129.t2 |
| Definition | - |
>habu1_s403020_g25129.t2 gggaggtcattccgcactcaagtccttccgagggtggagggtatggcgaagactgtggcttatttctatgatcccgatgt gggcaattttcattacggagcaggacatcccatgaaaccacatcggttggcattgacccacagtttggtgctacattatg gactctataagaagatgattggcagtgttgaggtatttaagccatatcaagcttctcagcatgacatgtgtcgctttcat tcagaagattatattgacttccttcagagagttagtccgaacaacatgcaaggattcaccaaaagcctcaatgctttcaa tgtgggagatgactgccctgtttttccaggactatttgaattttgttctcgatatactggagcttccttgcaaggagcaa cacagctgaataataagatttgtgatattgcaattaattgggctggaggcctgcatcatgccaagaagtttgaggcttct gggttttgttacgtgaatgacatcgtgattggcattttggagcttctcaagtaccacccacgtgtgctttacattgatat agacatccatcatggagatggtgtgcaggaagctttttacttgacagaccgtgtcatgacagtatcttttcacaaatacg ggaattactttttccctggtacaggtgacatgtatgaagttggagctgagagtggccgctattactgtctaaatgtacct ttgcgggatggcattgatgaccaaagttataagcatctcttccagccagtcattaatcaagtggtggaattctatcagcc aacttgcatagtgttgcagtgtggtgctgactccttaggctgtgatcgcctgggctgctttaacctcagtataagaggac atggggagtgcgtggaatatgtaaaaagtttcaacattccccttctggtattaggaggcggtggctatacagttcgcaat gtggcccgatgctggacttatgaaacatcattgctagtagatgaagcaattagtgaggagcttccgtatagtgaatactt tgaatactttgctccagactttactctccaccctgatgtcagcactagaattgaaaatcagaactcaaggcagtacttag atcaaatacggcagacaatatttgagaatttgaagatgctgaatcatgcacctagtgtccagatccatgatgtcccttct gatcttctgagctatgatcgcacagatgagcctgatccagaagagagaggttcagaagataattacagcaggccagaagc ttccaatgagttctatgatggtgaccatgataatgataaagaaagtgatgttgaaatatgaggcctgaatcctataaatt tatactatgtgaaattgtctggatgatgagactcttaaggaggcaataggttccagcagaaagactgctctttctacccg ttttctgaaatgatatcagcaggactggtaaatgatggaattatttgagcacagaaggcaatgagggttgccacttgacc tgatcttcagccattaattgtgaggaataaacattcattacttcaggttcatgtatgtatactttgttgcttggtgaccc tcttcaattctcattctgcaatgaccatcactcttcacaaagctgccgctgttcaaaaaaggacaggatttgtattgtat tttgaaccatttgtctttgattttcctgaaggacctaattagaaatctgttataaaaagcttgcctacgtggacatatca gtttattgcagctatatggccagaaacagtgaaatatccaattgtaggctacttgcatacatacatatataaaaatgcac tgagcatgatctaatgacaaataagaagacttataataaaattaatttttaaaaaagttatt |
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Protein
| Protein ID | habu1_s403020_g25129.t1 |
|---|---|
| Definition | - |
>habu1_s403020_g25129.t1 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQG FTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKY HPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI NQVVEFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAIS EELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLLSYDRTDEPDPEERGS EDNYSRPEASNEFYDGDHDNDKESDVEI |
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| Protein ID | habu1_s403020_g25129.t2 |
| Definition | - |
>habu1_s403020_g25129.t2 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIGSVEVFKPYQASQHDMCRFHSEDYIDFLQRVSPN NMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILE LLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLF QPVINQVVEFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVD EAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLLSYDRTDEPDPE ERGSEDNYSRPEASNEFYDGDHDNDKESDVEI |
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