Gene
| Gene Model ID | habu1_s4037_g13253 |
|---|---|
| Locus | habu1_scaffold4037 : 29766 ... 92754 : + |
| To GenomeBrowser | habu1_scaffold4037:29766..92754 |
| Genes list of scaffold | habu1_scaffold4037 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sparc isoform x2 | GO:0005509 GO:0005578 GO:0005615 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4037_g13253.t1 | 1 | 1 | HMA | 6 | 42 | 7.6e-06 | 25.9 | 7.3e-09 | 1.8e-05 | 24.7 |
| habu1_s4037_g13253.t1 | 1 | 1 | FOLN | 148 | 169 | 1.5e-11 | 43.9 | 6.0e-15 | 1.5e-11 | 43.9 |
| habu1_s4037_g13253.t1 | 1 | 1 | Kazal_1 | 171 | 225 | 2.6e-11 | 43.3 | 1.0e-14 | 2.6e-11 | 43.3 |
| habu1_s4037_g13253.t1 | 1 | 1 | Kazal_2 | 185 | 225 | 2.2e-10 | 40.2 | 9.0e-14 | 2.2e-10 | 40.2 |
| habu1_s4037_g13253.t1 | 1 | 1 | SPARC_Ca_bdg | 229 | 365 | 3.19496e-43 | 146.3 | 1.4013e-45 | 3.69943e-42 | 142.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4037_g13253.t1 | gi|602637665|ref|XP_007425674.1| | PREDICTED: SPARC isoform X1 [Python bivittatus] | 0.0 |
| habu1_s4037_g13253.t1 | gi|602637667|ref|XP_007425675.1| | PREDICTED: SPARC isoform X2 [Python bivittatus] | 0.0 |
| habu1_s4037_g13253.t1 | gi|564263159|ref|XP_006270448.1| | PREDICTED: SPARC [Alligator mississippiensis] | 0.0 |
| habu1_s4037_g13253.t1 | gi|700400162|ref|XP_009940922.1| | PREDICTED: SPARC isoform X2 [Opisthocomus hoazin] | 0.0 |
| habu1_s4037_g13253.t1 | gi|542149577|ref|XP_005483739.1| | PREDICTED: SPARC [Zonotrichia albicollis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2070.8 |
| Venom grand-1 | 44.6 |
| Pit, infrared sensing | 1002.7 |
| Nose | 68.8 |
| Brain-1 | 126.1 |
| Eye | 48.1 |
| fetal fibroblast | 762.4 |
| venom gland-2 | 47.9 |
| Brain-2 | 162.6 |
| Spleen | 53.8 |
| Lung | 135.9 |
| Liver | 14.4 |
| Kidney | 27.5 |
| Pancreas | 8.1 |
| Small intestine | 6.6 |
| Large intestine | 58.2 |
| Stomach | 49.1 |
| heart | 48.1 |
| ovary | 38.4 |
| cheek muscle | 56.5 |
Transcript
| Transcript ID | habu1_s4037_g13253.t1 |
|---|---|
| Definition | - |
>habu1_s4037_g13253.t1 ggtcggcaggcctttcgctttgctgaggctggacgaacagtcggctagccgaggagcaagcgagaaaaagtctgtggagg agcagcagccatgccgaaacatgagttctttgtggatatgacctgtgaaggatgcctcaatactgtaacccgtgttctca acaaactgggaggtgttcagtttgaaattgacctacctaacaagaaagcacatatcccaaagaaagcctgcttcttcgtg gatgagaacagtgaagaatcacctttgatgtctaggtgctgcaccaaatattttggcaggaacctgaggaccacaactga gtttcaaagaaagatgcgggcctggatttttttcttcctctgcctggcaggcaaggcgctggcaactccacaggatgctc tgccggaggagatggaagttatagaggaccctgcaacacaggaaccagttggaatcaacccagtccaggtggaaattggc gagtttgaagagaccactgtggatgttgaggagattgtggctgaaaacccctgccaaaaccaccactgcaaacacggcaa agtctgtgaagtagatgaaagcaacactccaatgtgtgtatgccaagatccttccagctgcccaaccagcactgcagtgt ttgagaaggtatgtggtactgacaacaagacctatgacacctcctgccacttctttgccaccaaatgtactttggagggt accaagaaaggacacaaacttcacctggattacattggaccttgcaaagtcattcctgcctgccttgacactgagctgac tgaattccctctgcgtatgcgcgactggctgaagaacgtgctggtcaccctgtacgagcgggatgaggacaacaacctgc tgaatgagaagcagaaactcaaggtgaagaagctccacgagaatgagaagcgtctcgaagctggcgatcatccagtagaa ctcctggcccgtgactttgagaagaactacaacatgtacatcttccctgtgcactggcaatttggacagctagaccaaca tcctgtggatggatacctgtcccacactgaactggccccacttagagctcccttgatccctatggagcactgcaccactc gcttctttgagacatgtgatctagacaacgacaaatacattgctctggaagaatgggccaactgctttggcattaaggaa aaggacattgacaaggatcttgtcatctaaatttagcagcttcttcatctgtatgcacaagttgtgttcttccattttaa caagttgaagagtgttttttctttatcggggacaaggtgctaatataggtctaaacatatacattaacggtgctaaaaaa acaagacagaaagttgatagtagcttaatctataccactagatcactttgctcacacacccattgtgcatttctgttgac cttttaatttgatgatactagtacagtaattaaaaaaaatctgttccaattttcta |
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Protein
| Protein ID | habu1_s4037_g13253.t1 |
|---|---|
| Definition | - |
>habu1_s4037_g13253.t1 MPKHEFFVDMTCEGCLNTVTRVLNKLGGVQFEIDLPNKKAHIPKKACFFVDENSEESPLMSRCCTKYFGRNLRTTTEFQR KMRAWIFFFLCLAGKALATPQDALPEEMEVIEDPATQEPVGINPVQVEIGEFEETTVDVEEIVAENPCQNHHCKHGKVCE VDESNTPMCVCQDPSSCPTSTAVFEKVCGTDNKTYDTSCHFFATKCTLEGTKKGHKLHLDYIGPCKVIPACLDTELTEFP LRMRDWLKNVLVTLYERDEDNNLLNEKQKLKVKKLHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPVD GYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALEEWANCFGIKEKDIDKDLVI |
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