Gene
| Gene Model ID | habu1_s4037_g13256 |
|---|---|
| Locus | habu1_scaffold4037 : 235379 ... 265275 : - |
| To GenomeBrowser | habu1_scaffold4037:235379..265275 |
| Genes list of scaffold | habu1_scaffold4037 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| proton-coupled amino acid transporter 1 isoform x2 | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4037_g13256.t1 | 1 | 1 | Aa_trans | 46 | 454 | 0.0 | 246.5 | 0.0 | 0.0 | 246.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4037_g13256.t1 | gi|602647386|ref|XP_007430119.1| | PREDICTED: proton-coupled amino acid transporter 1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s4037_g13256.t1 | gi|602647390|ref|XP_007430121.1| | PREDICTED: proton-coupled amino acid transporter 1 isoform X3 [Python bivittatus] | 0.0 |
| habu1_s4037_g13256.t1 | gi|602647388|ref|XP_007430120.1| | PREDICTED: proton-coupled amino acid transporter 1 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s4037_g13256.t1 | gi|327265478|ref|XP_003217535.1| | PREDICTED: proton-coupled amino acid transporter 1 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s4037_g13256.t1 | gi|564246678|ref|XP_006262449.1| | PREDICTED: proton-coupled amino acid transporter 1-like [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.0 |
| Venom grand-1 | 11.2 |
| Pit, infrared sensing | 3.2 |
| Nose | 3.8 |
| Brain-1 | 5.1 |
| Eye | 2.9 |
| fetal fibroblast | 6.5 |
| venom gland-2 | 46.4 |
| Brain-2 | 5.2 |
| Spleen | 1.5 |
| Lung | 1.6 |
| Liver | 0.4 |
| Kidney | 0.5 |
| Pancreas | 1.3 |
| Small intestine | 1.7 |
| Large intestine | 6.1 |
| Stomach | 1.5 |
| heart | 1.5 |
| ovary | 2.0 |
| cheek muscle | 1.6 |
Transcript
| Transcript ID | habu1_s4037_g13256.t1 |
|---|---|
| Definition | - |
>habu1_s4037_g13256.t1 gatgttttccatttgtactatcagtgaatgagtggttgttaagtgagaaccaatccaggactttccagaatttaaacaca tctggagaacagaggggaaggttggagtctaagtgtaatataatatcatctctgtttatgaaaatacatcagcttgtgat tcacctcagcaagctggtctttagctacagcttcccacaacagtgaccatctttaagaggcaataaccaaataagtcaca atgtccaccaagaggttgtgtaatgaagactacaatgattacagttcaacagatgtgactcctgatggcagtttcccaga tggcttgaacaatatttccagtccatcatcctatcaacgatttggagaaacaaatggtacaacatggtaccaaacattaa tacatctcttgaaaggaaacgttggtactggcctgttaggacttccgttagcaatcaaaaattctggtattgtgctgggt cccatctgcttgcttgtgattggaatcatcgcagtacattgcatggacatccttgttaaatgcgctcaccacctgtgcca gaagcatcaaaaaccatttctggactatggggatgctgtcatgcatgggctagaggccggtcccttttcatggctcagaa ctcattctgtctggggaaggtacctagtgagttttttcttaattcttactcagctgggattctgttgtgtatattttgta ttccttgctgacaatttcagacaggttatatctgctgccaatggtaccaccaatgactgcaatgccaatgaaactgctct gagggctccaacgatgagctctcagttatatatcttgtccttcttaccatttgtgatattgctcgtcttcatccagaatc tcaagattctttccattttctccatggtggccaatattttgatgttgagcagcctgataatgttataccagtacattgtc cgggacattccaaatcctagccatctgcctatggtagctgcctggaagacaatgcctctcttttttggtacagccatctt tgcctttgaaggcattggagtggtgctccctctagaaaacaaaatgaagaaccctcagcactttcacactattctgtatg tgggaatggccattgtcaccacgttctacctcagcttgggaacactaggatatttgcgctttggagctaacatccagccc agcatcactctcaatctccccaactgttggttgtaccagtctgtcaagctgctctactccctcggaatattcttcactta tgctctgcagttctatgtccctgcagaaataataattcctgtggctgtttccaagatccctgaacgctggagattatgtt gcaaactgctgctgagaatattcctggtctgcgtaacatgtgcccttgcaatactgattcctcgcttggacattgtcata gctctggtaggctcggtgagcagcagtgctctagcacttattatcccacccatcttggagatcttcacctattattcaga aggcctgcacccgctcatcctggttaaagacattctcatcagcctctttggtattattggctttgttgtggggacatatg aatctctctatgaactgattgtaccaactgtgtccaatgccaccactgctttaccatgacagtttgtagcatcttgaact gttataagtgattatgtgaacatttagcacatccattttactgaaacagaagcagaatggatgcagaaagtagagaaaca agggaacttaatgaagtcgcaaataaacattattgaatttgatactggc |
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Protein
| Protein ID | habu1_s4037_g13256.t1 |
|---|---|
| Definition | - |
>habu1_s4037_g13256.t1 MSTKRLCNEDYNDYSSTDVTPDGSFPDGLNNISSPSSYQRFGETNGTTWYQTLIHLLKGNVGTGLLGLPLAIKNSGIVLG PICLLVIGIIAVHCMDILVKCAHHLCQKHQKPFLDYGDAVMHGLEAGPFSWLRTHSVWGRYLVSFFLILTQLGFCCVYFV FLADNFRQVISAANGTTNDCNANETALRAPTMSSQLYILSFLPFVILLVFIQNLKILSIFSMVANILMLSSLIMLYQYIV RDIPNPSHLPMVAAWKTMPLFFGTAIFAFEGIGVVLPLENKMKNPQHFHTILYVGMAIVTTFYLSLGTLGYLRFGANIQP SITLNLPNCWLYQSVKLLYSLGIFFTYALQFYVPAEIIIPVAVSKIPERWRLCCKLLLRIFLVCVTCALAILIPRLDIVI ALVGSVSSSALALIIPPILEIFTYYSEGLHPLILVKDILISLFGIIGFVVGTYESLYELIVPTVSNATTALP |
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