Gene
| Gene Model ID | habu1_s4037_g13257 |
|---|---|
| Locus | habu1_scaffold4037 : 275526 ... 289375 : - |
| To GenomeBrowser | habu1_scaffold4037:275526..289375 |
| Genes list of scaffold | habu1_scaffold4037 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ganglioside gm2 activator | GO:0043227 GO:0044238 GO:0044712 GO:0050877 GO:0065007 GO:1901575 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4037_g13257.t1 | 1 | 1 | E1_DerP2_DerF2 | 43 | 198 | 3.6e-25 | 88.7 | 8.9e-29 | 4.4e-25 | 88.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4037_g13257.t1 | gi|602647392|ref|XP_007430122.1| | PREDICTED: ganglioside GM2 activator [Python bivittatus] | 0.0 |
| habu1_s4037_g13257.t1 | gi|327265480|ref|XP_003217536.1| | PREDICTED: ganglioside GM2 activator [Anolis carolinensis] | 0.0 |
| habu1_s4037_g13257.t1 | gi|527257967|ref|XP_005147247.1| | PREDICTED: ganglioside GM2 activator [Melopsittacus undulatus] | 0.0 |
| habu1_s4037_g13257.t1 | gi|525011862|ref|XP_005053545.1| | PREDICTED: ganglioside GM2 activator [Ficedula albicollis] | 0.0 |
| habu1_s4037_g13257.t1 | gi|543360341|ref|XP_005523815.1| | PREDICTED: ganglioside GM2 activator [Pseudopodoces humilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 38.0 |
| Venom grand-1 | 10.4 |
| Pit, infrared sensing | 30.9 |
| Nose | 10.2 |
| Brain-1 | 11.7 |
| Eye | 19.8 |
| fetal fibroblast | 37.9 |
| venom gland-2 | 26.0 |
| Brain-2 | 10.2 |
| Spleen | 28.8 |
| Lung | 73.1 |
| Liver | 28.4 |
| Kidney | 17.4 |
| Pancreas | 18.8 |
| Small intestine | 12.9 |
| Large intestine | 9.8 |
| Stomach | 8.3 |
| heart | 11.8 |
| ovary | 8.0 |
| cheek muscle | 5.4 |
Transcript
| Transcript ID | habu1_s4037_g13257.t1 |
|---|---|
| Definition | - |
>habu1_s4037_g13257.t1 ggtttcagtgcttgcgacataagtcacgttttctccgtcaggagatctggtggagaaaggaggcgggttcaaagctatct ctgatgcagggggagaggacgagaggccagtaaataactcccgagactttggtgggcctttcactctggactcttggggc tcttgcttcctggagctggaaagcgaacttcgaagagctatagatctctccctgagcttgtgagctgctttcttcctgat tttagccgagttgatccgagaaatgcaggctttggcgctctggctgaccgtaggcgctctccagctgttgacagctgtcc acgggggaccccagcaacaacgctttgtcgcgccggacattacctggtccctgagcaaggtccaaaactttgcatgggag aactgtggtcctccatcggaacctgcagtaattaagagtctgtccgtaagtccagatccaattgctatccctggagatgt gacagttagcgtatcaggggccaacactataatcctctgtgctcctctgaaggcaactgtcatactggagaagaagcttg gggatatgtggataaaagtcccatgtgtggatcagcttgggagctgcacctatgatgatacttgcaccatgctggacagt ctcatccctccaggcgagccatgtccaccgccattggaaagttacggcattccatgtcattgcccattcgaagcgggtac ctacacccttccttcctctgaattcttcatacccaacatggatttgccttctttcctcaccaatggagactacaagatga gagttgtgctgagcaacggggaccaagagatgtcctgcaccaagctgtccttctccttgcaggcagagaacatacatgca aagctttgatggctacactgagtcttagtgtcacgtgccatgtttcttccagctttttctatcctattatgactaacatg aagagttactttgccgcatttgaagaggaagggttatagttactgcttttgtgactgctgttaattacttggaggaccaa ttggagaatccaaggaaagaatgttccttattagaaaatgatgcctgcctatctaaaacttactaaggaccagattatac aaattattggttggaaatggggatttgcatacattaagcatatgtttagctggcaaatactctgccgggtgcattgggcc cagcattggagcattccactggaggattccctattagatttccctacattacagagttttaaatggtagaggcctcttca aggcatgagttagtggaagttatataggtgtactgatgacaggataatctaaaccaggtattaaaaagactggagaagct gcatatt |
|
Protein
| Protein ID | habu1_s4037_g13257.t1 |
|---|---|
| Definition | - |
>habu1_s4037_g13257.t1 MQALALWLTVGALQLLTAVHGGPQQQRFVAPDITWSLSKVQNFAWENCGPPSEPAVIKSLSVSPDPIAIPGDVTVSVSGA NTIILCAPLKATVILEKKLGDMWIKVPCVDQLGSCTYDDTCTMLDSLIPPGEPCPPPLESYGIPCHCPFEAGTYTLPSSE FFIPNMDLPSFLTNGDYKMRVVLSNGDQEMSCTKLSFSLQAENIHAKL |
|