Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s4037_g13258
Locus habu1_scaffold4037 : 311566 ... 340890 : +
To GenomeBrowser habu1_scaffold4037:311566..340890
Genes list of scaffold habu1_scaffold4037

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s4037_g13258.t1 gi|602647394|ref|XP_007430123.1| PREDICTED: coiled-coil domain-containing protein 69 [Python bivittatus] 0.0
habu1_s4037_g13258.t1 gi|641756958|ref|XP_008164713.1| PREDICTED: coiled-coil domain-containing protein 69 [Chrysemys picta bellii] 0.0
habu1_s4037_g13258.t1 gi|686614960|ref|XP_009284327.1| PREDICTED: coiled-coil domain-containing protein 69 [Aptenodytes forsteri] 0.0
habu1_s4037_g13258.t1 gi|729760679|ref|XP_010577253.1| PREDICTED: coiled-coil domain-containing protein 69 [Haliaeetus leucocephalus] 0.0
habu1_s4037_g13258.t1 gi|543725101|ref|XP_005503687.1| PREDICTED: coiled-coil domain-containing protein 69 [Columba livia] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 9.6
Venom grand-1 6.1
Pit, infrared sensing 8.0
Nose 10.7
Brain-1 0.8
Eye 2.4
fetal fibroblast 7.4
venom gland-2 7.8
Brain-2 0.5
Spleen 21.7
Lung 12.6
Liver 11.2
Kidney 12.5
Pancreas 0.1
Small intestine 7.0
Large intestine 6.4
Stomach 13.4
heart 121.4
ovary 0.9
cheek muscle 1.3

Transcript
Transcript IDhabu1_s4037_g13258.t1
Definition-
>habu1_s4037_g13258.t1
gcagccaaggacatggcagccaggcagcatagacaagactctgccctcatgccccatcctgcacagttgatgctgcgggt
gtgggcagagggcgtggctgccatggcgctgctgggctgcctgggcaatctgcggtgggccctggaggcaaaagaaataa
aaactcagtataacagcggacaagcttcctgtgaattgatagtactgaagactgaagccaacacagattatttgcacaat
gaagcagaaaaaaggaaggctgcaaagctggagaagcagatggaggagaccacaaggctccagcaagaacagcaggaaga
agaagattgtctgaaggaagttcaccatgctgagattcacagacttagccaggacgttcaactccaggtagagaaggagg
acttgcagcataagcaattttctgaaaaatatgatatgctgaagagagaacaggaggaaacactgcaaaaactccagaaa
acacatgatcaagagaagctgttcctaaccgaatcctaccaaaaaactcaggcatctttgcaggagaccattgacaagct
gacttcccagctgaagtcctttcaggagaaaatgaaacgggtagaagagtcaattctgagcagagattataaaaagcaca
ttcaggactatgggacccccagccagttctgggagcaagaactagagagtctacattttgtcattgagatgaagaatgaa
cgcatccacagcttggacaagaagctgctgaatctggaaatagtgatggagtcaaacttattagttgaagagaaaattaa
aattctacaacaggaaaatgaagatctccaagtacggatgcagaaccacatgacagtgacaaggcagctgtctgatgagc
ttctgaccattcgtgaggccctggagaaggagactcagctgagggagcaagctcaccgagagaaagaggagctcttgtac
agggtgcttcatggcgattcaggccacccctttgctatttctactgagacatcactcattgccacatagcactttgagag
gccaaagacactgatgtggtataaaaacagaagagggaaggagaccaccatgtgactgtttcgtcattgcattctactcc
agaggtgttcagatatttttttatcccatggactaaggtggtcttcaagggacatgccacaggtcacactcctccccgac
aaatgagggccaacttaagaagtgggagcagagaataacattcacattaaatgaattaaataattccctgatt

Protein
Protein IDhabu1_s4037_g13258.t1
Definition-
>habu1_s4037_g13258.t1
MLRVWAEGVAAMALLGCLGNLRWALEAKEIKTQYNSGQASCELIVLKTEANTDYLHNEAEKRKAAKLEKQMEETTRLQQE
QQEEEDCLKEVHHAEIHRLSQDVQLQVEKEDLQHKQFSEKYDMLKREQEETLQKLQKTHDQEKLFLTESYQKTQASLQET
IDKLTSQLKSFQEKMKRVEESILSRDYKKHIQDYGTPSQFWEQELESLHFVIEMKNERIHSLDKKLLNLEIVMESNLLVE
EKIKILQQENEDLQVRMQNHMTVTRQLSDELLTIREALEKETQLREQAHREKEELLYRVLHGDSGHPFAISTETSLIAT

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