Gene
| Gene Model ID | habu1_s4037_g13259 |
|---|---|
| Locus | habu1_scaffold4037 : 345034 ... 366305 : - |
| To GenomeBrowser | habu1_scaffold4037:345034..366305 |
| Genes list of scaffold | habu1_scaffold4037 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| low affinity cationic amino acid transporter 2-like | GO:0003333 GO:0015171 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4037_g13259.t1 | 1 | 1 | AA_permease_2 | 34 | 490 | 0.0 | 177.0 | 0.0 | 0.0 | 177.0 |
| habu1_s4037_g13259.t1 | 1 | 1 | AA_permease | 39 | 434 | 9.10003e-42 | 142.9 | 1.4013e-45 | 9.10003e-42 | 142.9 |
| habu1_s4037_g13259.t1 | 1 | 1 | AA_permease_C | 536 | 586 | 1.5e-21 | 76.0 | 3.0e-25 | 1.5e-21 | 76.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4037_g13259.t1 | gi|637269563|ref|XP_003217540.2| | PREDICTED: low affinity cationic amino acid transporter 2-like [Anolis carolinensis] | 0.0 |
| habu1_s4037_g13259.t1 | gi|729761164|ref|XP_010577513.1| | PREDICTED: cationic amino acid transporter 2-like [Haliaeetus leucocephalus] | 0.0 |
| habu1_s4037_g13259.t1 | gi|620952477|ref|XP_007655267.1| | PREDICTED: low affinity cationic amino acid transporter 2-like [Ornithorhynchus anatinus] | 0.0 |
| habu1_s4037_g13259.t1 | gi|699699862|ref|XP_009890937.1| | PREDICTED: low affinity cationic amino acid transporter 2-like [Charadrius vociferus] | 0.0 |
| habu1_s4037_g13259.t1 | gi|694660063|ref|XP_009485387.1| | PREDICTED: low affinity cationic amino acid transporter 2-like [Pelecanus crispus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.1 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.1 |
| heart | 0.1 |
| ovary | 0.5 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s4037_g13259.t1 |
|---|---|
| Definition | - |
>habu1_s4037_g13259.t1 caattctggccggcccttggcaccaccctcgctcccctctcgggggagagagaacgatgtttgctgcagagaaacgccac gctcgctatagcgggcgagccttttttgcacatctctaacttgccgggaaaagagataccacccagagtacctcaatgca agtctggagttccatgatctccctctttcagatggtttctcgtcggaaaataataactgccaatggctacagagaatcac acctgcatcgctgccttaatctcctggatttagtagcctttggtgtgggcagtactctaggtgcaggggtgtatgtctta gcaggggaagtagccaagaatacctcaggacccagcattatcatttcctttttgattgctgctatggtatccattttggc aggattttgttatgctgaatttggagcccgggtgcctctaacaggatcagcgtatctgtacagctacatcacagttggag aactatgtgcattcgtcacaggatggaacctgctcttgtcctatgtaattggagcctccagtatagccagagcatggagt gctacttttgatgaaattttgggtgaaaacctggggaatgttttcaacatacatctggccacgagcatcccaggcctggc tgaatatccagatatctttgctgtttgcctcattttcctagttactggcctcctctccatgggtataaaagaatctacca cagtgaataaagtctttacaactattaatgtggtcatccttgtcttcataacaattagtgggttattcaaaggagacctg aaaaattggacattaagtgaagatgatctgcgaaggctgattgacagtaaccttagtaaccaatctgtggttggcaatga cacctggaaatatggaactggagggttcatgccatatggcttttcaggcactctggctggagcagccacatgcttctatg cttttgttggatttgattgcattgcaactacaggtgaagaagtgaaggatcctcataaatctatccccctgggaatcgtt ttctcacttctcatctgtttcctgctatattttggtgtttctgctgccttgaccctcatgatgccctatcaccttttgga tccactaagcccattgccagtggcttttgaatatattggatggagaccagccaagtatgctgttgctgtggggtcactct gtgcacttacaaccagcttgttgggtgctatgttcccaatgccacggattttatttgcaatggccagggatggacttctc tttcattttttggccagagtgaatagccaacagaatccagttatttcaactttggtatctggagcagtttcagcactgct ggctgtcctttttgatctgaagatcttggttaatgtgatgtctattggaacactgctggcctacactttagttgctgtct ccattctacttctcaggtaccaacctgatcctggttctccagacccaatagaaaagacaactgtaagcagaatggcttgg atagacctcctaatacaccctgatataattccgtcccatcgctcttacagactggtggcatacacagtgtttattcttgc ttttttcatctgtattgtgtgcgtgctgacctccacaagatggccatgcttgacatctggaactctgtggtgtattgtct gccttttttccaatttgctggggattctactagcatctctggtcatctggagacagcctcaaagtcagaaaaaagtagat ttcatggtaccatgcctgccattcctacctatcatcagtatcttagtcaatagtttcctgatggcccaactgagctatga gacctgggttctgttctcagtatggttgcttattggttttctcatttactttggctatggaatttgtcacagcacagaga ggaagaagaacaaagatttgtctttagagaaaacgactcatttaataaacagcccagattcaaatgtcacttttaaaaaa tgactttaaggaaaccatggcatggaatggtttatttcatttacttctatttctcaatagtttatcatttgtccccacca tttctaagtagcatatcttaaggcatctgttcttcctctttggatctaaaactaaaaactagttcaaaggatttcttggg agctgaagtgagatgattagttggataatgatagatagatagatagatagatagatagatagatagatagatagatagat agatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagataagagacagaca aatatgcacaacactgccacaagatgcttatcattaaagtttggactagttgcaaagcct |
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Protein
| Protein ID | habu1_s4037_g13259.t1 |
|---|---|
| Definition | - |
>habu1_s4037_g13259.t1 MQVWSSMISLFQMVSRRKIITANGYRESHLHRCLNLLDLVAFGVGSTLGAGVYVLAGEVAKNTSGPSIIISFLIAAMVSI LAGFCYAEFGARVPLTGSAYLYSYITVGELCAFVTGWNLLLSYVIGASSIARAWSATFDEILGENLGNVFNIHLATSIPG LAEYPDIFAVCLIFLVTGLLSMGIKESTTVNKVFTTINVVILVFITISGLFKGDLKNWTLSEDDLRRLIDSNLSNQSVVG NDTWKYGTGGFMPYGFSGTLAGAATCFYAFVGFDCIATTGEEVKDPHKSIPLGIVFSLLICFLLYFGVSAALTLMMPYHL LDPLSPLPVAFEYIGWRPAKYAVAVGSLCALTTSLLGAMFPMPRILFAMARDGLLFHFLARVNSQQNPVISTLVSGAVSA LLAVLFDLKILVNVMSIGTLLAYTLVAVSILLLRYQPDPGSPDPIEKTTVSRMAWIDLLIHPDIIPSHRSYRLVAYTVFI LAFFICIVCVLTSTRWPCLTSGTLWCIVCLFSNLLGILLASLVIWRQPQSQKKVDFMVPCLPFLPIISILVNSFLMAQLS YETWVLFSVWLLIGFLIYFGYGICHSTERKKNKDLSLEKTTHLINSPDSNVTFKK |
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