Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s4037_g13261
Locus habu1_scaffold4037 : 434948 ... 493634 : +
To GenomeBrowser habu1_scaffold4037:434948..493634
Genes list of scaffold habu1_scaffold4037

Annotation by Blast2GO
Annotation GO
tnfaip3-interacting protein 1 isoform x1 GO:1902531

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 25.8
Venom grand-1 13.5
Pit, infrared sensing 28.1
Nose 35.1
Brain-1 29.7
Eye 24.3
fetal fibroblast 33.3
venom gland-2 19.0
Brain-2 36.6
Spleen 41.5
Lung 36.0
Liver 31.1
Kidney 15.4
Pancreas 6.6
Small intestine 10.9
Large intestine 20.5
Stomach 13.7
heart 83.9
ovary 14.7
cheek muscle 55.3

Transcript
Transcript IDhabu1_s4037_g13261.t1
Definition-
>habu1_s4037_g13261.t1
ccagcccatttgggcttccccgccccggttcctctcttttgtgcctctgcgggcggcagagggaaagtttgctgattagc
tgagcggcttgtcaatcaggcgcttgggaaattccaaaatgggcggatctgagtcaaggttcctcctgggcaagcggaga
ggaagtaaaagcgatgcccgtgaaggcaaagctctggaggtcccgaagctgtttggacctcgatccgtacaattttagca
ggtaggacctagctcacctcctcccctctccctgcaggaagtcgagctcattgcgtctcttttaaactgaagaaggaggt
gggaaggatggagtcctgggtgctttcgacatggctgtctcatgaccttggtatgagggggagtgtttccttttgaaagt
gccaaggaggccaagagattgggagttttcctcacctctgagggcaagatgttccacaaaacaggggcagtggagaaaag
gcccttttcattgtccccgccagtcgaagttctctgactgatgaggcagaaatacctggaaattcagtaattaatctgca
gtcatggaaggcaaggggccctatcgaatctatgaccctggtggtgggacacaggaagaagcatctgctgccttcgaacg
gctagtggaagaaaatgtaaaacttaaggagaagatgcagggaattaaatctctaggagagttattagaagagtctcagt
tagaagcctccagattacgtcaaaaagtggaagacctcgtgaaggacaacgaaatgctaagatcaacctcctcttttgaa
aaatttgaagaaatagcaggtgggattccagaactttgctcgtcctctgatattccggtcgagggtgagaagaacctaga
aaaagcagcacagaagccatcttccagtggatcctcatctgaatttgaaattgttgccaatgaagataagaggtcctctc
aagagagtagtaggaaatctgacttagagccgcttctgaacgaggacaccaaccttatgctccaccttcagcgctttgag
aacaccctcagtcttttcgctgaggagtctgacaaaacccagctttttgcccatctggggcgcatggctctggagtttaa
ccgcctggcctccaaagtgcacaagaacgagcaaaggacatccattcttcagacattgtgtgaacaattacggaatgaaa
atgaggagctgaggacaaagttggagagggaactagagcaaaggaacgagatatcagagaaactaaggtgtgagaatctg
gaactcagaaagatggtgatgatgggaagtaaggaaagtgtgaaagcagaaaatacagaatatgctggtcagcaacagaa
gggagctacagaggagcaagcagcagggaagagcatgttgggggcaagtgagaagaaagtgaagatacttgaacatcagc
gcaatgagctattggaggtgaataaacagtgggaccatcatttccggtccatgaagcagcagtatgagcagaagataaca
gatctacggcagaaacttgctgactcccaaaaggccctagcagagttggagacagagcgggagcagaaacagagggattt
tgaccgcaaacttctcttggcaaaatccaaaattgaagaagaagaggcagaaaaagagagactcagccgggaggtgaagg
acctcaagcacaaggtgaagtttcttcaggatcaattggttcctgtcacaaggcaaagagagtaccaggagaaggagatt
ctccgactaaataaggccctagaagaggctctgaacttccaagcacctcctcattccccctcagccttcaaaaacgatcc
taacccaagtctccggcaccaggaagtgatgacccagaacgagcttctgaaacagcaagtgaagatttttgaggaggatt
tccaacgggaacggagtgacagggaaaggatgaatgaagaaaaagaggaactgaagaagcagctagaaaaacttcagaag
cagctgaccctcactaataaccagctgcgaattgttaaagaagactaccacaaagagaaggaagaaaaggataagtttaa
gaaactgcttaaacagcacaagcagcattcgggtgacagactgcatcccgaaccacagccaggacaaattaccccaatct
gccccatgtaccagtttcagtgctctcctccagtccaaccacatgcttatcatggttttgaggactggcagcagatccgc
tacccacccccagcggtggcaaatgagcatcctccaattcagaactatcatcgtttcccacctccagattatacctggta
cccaccatgtgttatagcacataatcagaacacacaaggaggggatggagtgaaacagtttcccaaggaatctgacccta
caggtctcgggttacctaaagctcaaagacccgtttaactttgtggtgatatgtgtaagctgcagaagcaagacagcctt
catgtgttaatccagctcaactcctttacttctgggatattggtcacatttatttgtgcataaaaaaattccacgccact
tggatgcttgagataataagcaggattttctctgctgcattcaaggattcagctgcaagagaacaactgtcaagccccag
caatgaagactaggaattctggattaacaggacctatgtttagctgattctcttacagtcgggtagctgtatatctagga
tgtggcaattttgcatttactggtagaggaagcaggctttgggcaggacagcggtcctttactagtaattaatgcctata
taagttcaggattcagtagttgcccaaggacaaagaaataatgtataggaataaaaatgaaagatacttttcctacactg
aaatatatatatatatatatacatatatatattcacatgcacattaaaacttgtagttgtcaataaatgt
Transcript IDhabu1_s4037_g13261.t2
Definition-
>habu1_s4037_g13261.t2
ccagcccatttgggcttccccgccccggttcctctcttttgtgcctctgcgggcggcagagggaaagtttgctgattagc
tgagcggcttgtcaatcaggcgcttgggaaattccaaaatgggcggatctgagtcaaggttcctcctgggcaagcggaga
ggaagtaaaagcgatgcccgtgaaggcaaagctctggaggtcccgaagctgtttggacctcgatccgtacaattttagca
ggtaggacctagctcacctcctcccctctccctgcaggaagtcgagctcattgcgtctcttttaaactgaagaaggaggt
gggaaggatggagtcctgggtgctttcgacatggctgtctcatgaccttggtatgagggggagtgtttccttttgaaagt
gccaaggcagaaatacctggaaattcagtaattaatctgcagtcatggaaggcaaggggccctatcgaatctatgaccct
ggtggtgggacacaggaagaagcatctgctgccttcgaacggctagtggaagaaaatgtaaaacttaaggagaagatgca
gggaattaaatctctaggagagttattagaagagtctcagttagaagcctccagattacgtcaaaaagtggaagacctcg
tgaaggacaacgaaatgctaagatcaacctcctcttttgaaaaatttgaagaaatagcaggtgggattccagaactttgc
tcgtcctctgatattccggtcgagggtgagaagaacctagaaaaagcagcacagaagccatcttccagtggatcctcatc
tgaatttgaaattgttgccaatgaagataagaggtcctctcaagagagtagtaggaaatctgacttagagccgcttctga
acgaggacaccaaccttatgctccaccttcagcgctttgagaacaccctcagtcttttcgctgaggagtctgacaaaacc
cagctttttgcccatctggggcgcatggctctggagtttaaccgcctggcctccaaagtgcacaagaacgagcaaaggac
atccattcttcagacattgtgtgaacaattacggaatgaaaatgaggagctgaggacaaagttggagagggaactagagc
aaaggaacgagatatcagagaaactaaggtgtgagaatctggaactcagaaagatggtgatgatgggaagtaaggaaagt
gtgaaagcagaaaatacagaatatgctggtcagcaacagaagggagctacagaggagcaagcagcagggaagagcatgtt
gggggcaagtgagaagaaagtgaagatacttgaacatcagcgcaatgagctattggaggtgaataaacagtgggaccatc
atttccggtccatgaagcagcagtatgagcagaagataacagatctacggcagaaacttgctgactcccaaaaggcccta
gcagagttggagacagagcgggagcagaaacagagggattttgaccgcaaacttctcttggcaaaatccaaaattgaaga
agaagaggcagaaaaagagagactcagccgggaggtgaaggacctcaagcacaaggtgaagtttcttcaggatcaattgg
ttcctgtcacaaggcaaagagagtaccaggagaaggagattctccgactaaataaggccctagaagaggctctgaacttc
caagcacctcctcattccccctcagccttcaaaaacgatcctaacccaagtctccggcaccaggaagtgatgacccagaa
cgagcttctgaaacagcaagtgaagatttttgaggaggatttccaacgggaacggagtgacagggaaaggatgaatgaag
aaaaagaggaactgaagaagcagctagaaaaacttcagaagcagctgaccctcactaataaccagctgcgaattgttaaa
gaagactaccacaaagagaaggaagaaaaggataagtttaagaaactgcttaaacagcacaagcagcattcgggtgacag
actgcatcccgaaccacagccaggacaaattaccccaatctgccccatgtaccagtttcagtgctctcctccagtccaac
cacatgcttatcatggttttgaggactggcagcagatccgctacccacccccagcggtggcaaatgagcatcctccaatt
cagaactatcatcgtttcccacctccagattatacctggtacccaccatgtgttatagcacataatcagaacacacaagg
aggggatggagtgaaacagtttcccaaggaatctgaccctacaggtctcgggttacctaaagctcaaagacccgtttaac
tttgtggtgatatgtgtaagctgcagaagcaagacagccttcatgtgttaatccagctcaactcctttacttctgggata
ttggtcacatttatttgtgcataaaaaaattccacgccacttggatgcttgagataataagcaggattttctctgctgca
ttcaaggattcagctgcaagagaacaactgtcaagccccagcaatgaagactaggaattctggattaacaggacctatgt
ttagctgattctcttacagtcgggtagctgtatatctaggatgtggcaattttgcatttactggtagaggaagcaggctt
tgggcaggacagcggtcctttactagtaattaatgcctatataagttcaggattcagtagttgcccaaggacaaagaaat
aatgtataggaataaaaatgaaagatacttttcctacactgaaatatatatatatatatatacatatatatattcacatg
cacattaaaacttgtagttgtcaataaatgt
Transcript IDhabu1_s4037_g13261.t3
Definition-
>habu1_s4037_g13261.t3
ccagcccatttgggcttccccgccccggttcctctcttttgtgcctctgcgggcggcagagggaaagtttgctgattagc
tgagcggcttgtcaatcaggcgcttgggaaattccaaaatgggcggatctgagtcaaggttcctcctgggcaagcggaga
ggaagtaaaagcgatgcccgtgaaggcaaagctctggaggtcccgaagctgtttggacctcgatccgtacaattttagca
ggcagaaatacctggaaattcagtaattaatctgcagtcatggaaggcaaggggccctatcgaatctatgaccctggtgg
tgggacacaggaagaagcatctgctgccttcgaacggctagtggaagaaaatgtaaaacttaaggagaagatgcagggaa
ttaaatctctaggagagttattagaagagtctcagttagaagcctccagattacgtcaaaaagtggaagacctcgtgaag
gacaacgaaatgctaagatcaacctcctcttttgaaaaatttgaagaaatagcaggtgggattccagaactttgctcgtc
ctctgatattccggtcgagggtgagaagaacctagaaaaagcagcacagaagccatcttccagtggatcctcatctgaat
ttgaaattgttgccaatgaagataagaggtcctctcaagagagtagtaggaaatctgacttagagccgcttctgaacgag
gacaccaaccttatgctccaccttcagcgctttgagaacaccctcagtcttttcgctgaggagtctgacaaaacccagct
ttttgcccatctggggcgcatggctctggagtttaaccgcctggcctccaaagtgcacaagaacgagcaaaggacatcca
ttcttcagacattgtgtgaacaattacggaatgaaaatgaggagctgaggacaaagttggagagggaactagagcaaagg
aacgagatatcagagaaactaaggtgtgagaatctggaactcagaaagatggtgatgatgggaagtaaggaaagtgtgaa
agcagaaaatacagaatatgctggtcagcaacagaagggagctacagaggagcaagcagcagggaagagcatgttggggg
caagtgagaagaaagtgaagatacttgaacatcagcgcaatgagctattggaggtgaataaacagtgggaccatcatttc
cggtccatgaagcagcagtatgagcagaagataacagatctacggcagaaacttgctgactcccaaaaggccctagcaga
gttggagacagagcgggagcagaaacagagggattttgaccgcaaacttctcttggcaaaatccaaaattgaagaagaag
aggcagaaaaagagagactcagccgggaggtgaaggacctcaagcacaaggtgaagtttcttcaggatcaattggttcct
gtcacaaggcaaagagagtaccaggagaaggagattctccgactaaataaggccctagaagaggctctgaacttccaagc
acctcctcattccccctcagccttcaaaaacgatcctaacccaagtctccggcaccaggaagtgatgacccagaacgagc
ttctgaaacagcaagtgaagatttttgaggaggatttccaacgggaacggagtgacagggaaaggatgaatgaagaaaaa
gaggaactgaagaagcagctagaaaaacttcagaagcagctgaccctcactaataaccagctgcgaattgttaaagaaga
ctaccacaaagagaaggaagaaaaggataagtttaagaaactgcttaaacagcacaagcagcattcgggtgacagactgc
atcccgaaccacagccaggacaaattaccccaatctgccccatgtaccagtttcagtgctctcctccagtccaaccacat
gcttatcatggttttgaggactggcagcagatccgctacccacccccagcggtggcaaatgagcatcctccaattcagaa
ctatcatcgtttcccacctccagattatacctggtacccaccatgtgttatagcacataatcagaacacacaaggagggg
atggagtgaaacagtttcccaaggaatctgaccctacaggtctcgggttacctaaagctcaaagacccgtttaactttgt
ggtgatatgtgtaagctgcagaagcaagacagccttcatgtgttaatccagctcaactcctttacttctgggatattggt
cacatttatttgtgcataaaaaaattccacgccacttggatgcttgagataataagcaggattttctctgctgcattcaa
ggattcagctgcaagagaacaactgtcaagccccagcaatgaagactaggaattctggattaacaggacctatgtttagc
tgattctcttacagtcgggtagctgtatatctaggatgtggcaattttgcatttactggtagaggaagcaggctttgggc
aggacagcggtcctttactagtaattaatgcctatataagttcaggattcagtagttgcccaaggacaaagaaataatgt
ataggaataaaaatgaaagatacttttcctacactgaaatatatatatatatatatacatatatatattcacatgcacat
taaaacttgtagttgtcaataaatgt

Protein
Protein IDhabu1_s4037_g13261.t1
Definition-
>habu1_s4037_g13261.t1
MEGKGPYRIYDPGGGTQEEASAAFERLVEENVKLKEKMQGIKSLGELLEESQLEASRLRQKVEDLVKDNEMLRSTSSFEK
FEEIAGGIPELCSSSDIPVEGEKNLEKAAQKPSSSGSSSEFEIVANEDKRSSQESSRKSDLEPLLNEDTNLMLHLQRFEN
TLSLFAEESDKTQLFAHLGRMALEFNRLASKVHKNEQRTSILQTLCEQLRNENEELRTKLERELEQRNEISEKLRCENLE
LRKMVMMGSKESVKAENTEYAGQQQKGATEEQAAGKSMLGASEKKVKILEHQRNELLEVNKQWDHHFRSMKQQYEQKITD
LRQKLADSQKALAELETEREQKQRDFDRKLLLAKSKIEEEEAEKERLSREVKDLKHKVKFLQDQLVPVTRQREYQEKEIL
RLNKALEEALNFQAPPHSPSAFKNDPNPSLRHQEVMTQNELLKQQVKIFEEDFQRERSDRERMNEEKEELKKQLEKLQKQ
LTLTNNQLRIVKEDYHKEKEEKDKFKKLLKQHKQHSGDRLHPEPQPGQITPICPMYQFQCSPPVQPHAYHGFEDWQQIRY
PPPAVANEHPPIQNYHRFPPPDYTWYPPCVIAHNQNTQGGDGVKQFPKESDPTGLGLPKAQRPV
Protein IDhabu1_s4037_g13261.t2
Definition-
>habu1_s4037_g13261.t2
MEGKGPYRIYDPGGGTQEEASAAFERLVEENVKLKEKMQGIKSLGELLEESQLEASRLRQKVEDLVKDNEMLRSTSSFEK
FEEIAGGIPELCSSSDIPVEGEKNLEKAAQKPSSSGSSSEFEIVANEDKRSSQESSRKSDLEPLLNEDTNLMLHLQRFEN
TLSLFAEESDKTQLFAHLGRMALEFNRLASKVHKNEQRTSILQTLCEQLRNENEELRTKLERELEQRNEISEKLRCENLE
LRKMVMMGSKESVKAENTEYAGQQQKGATEEQAAGKSMLGASEKKVKILEHQRNELLEVNKQWDHHFRSMKQQYEQKITD
LRQKLADSQKALAELETEREQKQRDFDRKLLLAKSKIEEEEAEKERLSREVKDLKHKVKFLQDQLVPVTRQREYQEKEIL
RLNKALEEALNFQAPPHSPSAFKNDPNPSLRHQEVMTQNELLKQQVKIFEEDFQRERSDRERMNEEKEELKKQLEKLQKQ
LTLTNNQLRIVKEDYHKEKEEKDKFKKLLKQHKQHSGDRLHPEPQPGQITPICPMYQFQCSPPVQPHAYHGFEDWQQIRY
PPPAVANEHPPIQNYHRFPPPDYTWYPPCVIAHNQNTQGGDGVKQFPKESDPTGLGLPKAQRPV
Protein IDhabu1_s4037_g13261.t3
Definition-
>habu1_s4037_g13261.t3
MEGKGPYRIYDPGGGTQEEASAAFERLVEENVKLKEKMQGIKSLGELLEESQLEASRLRQKVEDLVKDNEMLRSTSSFEK
FEEIAGGIPELCSSSDIPVEGEKNLEKAAQKPSSSGSSSEFEIVANEDKRSSQESSRKSDLEPLLNEDTNLMLHLQRFEN
TLSLFAEESDKTQLFAHLGRMALEFNRLASKVHKNEQRTSILQTLCEQLRNENEELRTKLERELEQRNEISEKLRCENLE
LRKMVMMGSKESVKAENTEYAGQQQKGATEEQAAGKSMLGASEKKVKILEHQRNELLEVNKQWDHHFRSMKQQYEQKITD
LRQKLADSQKALAELETEREQKQRDFDRKLLLAKSKIEEEEAEKERLSREVKDLKHKVKFLQDQLVPVTRQREYQEKEIL
RLNKALEEALNFQAPPHSPSAFKNDPNPSLRHQEVMTQNELLKQQVKIFEEDFQRERSDRERMNEEKEELKKQLEKLQKQ
LTLTNNQLRIVKEDYHKEKEEKDKFKKLLKQHKQHSGDRLHPEPQPGQITPICPMYQFQCSPPVQPHAYHGFEDWQQIRY
PPPAVANEHPPIQNYHRFPPPDYTWYPPCVIAHNQNTQGGDGVKQFPKESDPTGLGLPKAQRPV

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