Gene
| Gene Model ID | habu1_s4037_g13262 |
|---|---|
| Locus | habu1_scaffold4037 : 496040 ... 521637 : - |
| To GenomeBrowser | habu1_scaffold4037:496040..521637 |
| Genes list of scaffold | habu1_scaffold4037 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| low quality protein: glutathione peroxidase 3 | EC:1.11.1.9 GO:0004602 GO:0006749 GO:0006804 GO:0006979 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4037_g13262.t1 | 1 | 1 | GSHPx | 58 | 135 | 6.8e-25 | 86.5 | 7.3e-29 | 1.1e-24 | 85.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4037_g13262.t1 | gi|602634314|ref|XP_007424030.1| | PREDICTED: LOW QUALITY PROTEIN: glutathione peroxidase 3 [Python bivittatus] | 0.0 |
| habu1_s4037_g13262.t1 | gi|637269599|ref|XP_003217493.2| | PREDICTED: LOW QUALITY PROTEIN: glutathione peroxidase 3 [Anolis carolinensis] | 0.0 |
| habu1_s4037_g13262.t1 | gi|557276098|ref|XP_006021209.1| | PREDICTED: LOW QUALITY PROTEIN: glutathione peroxidase 3 [Alligator sinensis] | 0.0 |
| habu1_s4037_g13262.t1 | gi|564232510|ref|XP_006260633.1| | PREDICTED: LOW QUALITY PROTEIN: glutathione peroxidase 3 [Alligator mississippiensis] | 0.0 |
| habu1_s4037_g13262.t1 | gi|591354472|ref|XP_007071591.1| | PREDICTED: LOW QUALITY PROTEIN: glutathione peroxidase 3 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 134.0 |
| Venom grand-1 | 583.7 |
| Pit, infrared sensing | 326.2 |
| Nose | 2754.3 |
| Brain-1 | 45.3 |
| Eye | 46.4 |
| fetal fibroblast | 1.9 |
| venom gland-2 | 2212.5 |
| Brain-2 | 46.3 |
| Spleen | 54.5 |
| Lung | 2.4 |
| Liver | 358.0 |
| Kidney | 106.2 |
| Pancreas | 7.4 |
| Small intestine | 3.9 |
| Large intestine | 10.6 |
| Stomach | 14.0 |
| heart | 1152.5 |
| ovary | 2.0 |
| cheek muscle | 4.8 |
Transcript
| Transcript ID | habu1_s4037_g13262.t1 |
|---|---|
| Definition | - |
>habu1_s4037_g13262.t1 atactagaggccacccaactaaacacaggaaatagatgaactttttgctaatcagctaactaagttgaatgcccaacctg ggacaggaacaacaggagattttgacaggacttcacttatctcatcaacatgatgaagcaagatcctgcttgcgtgctca accgatcccagatcgagtcaaggtggattgctatgactccattcaaggatcagcccatgattatggggctctctccatat ctggacaatatcttgaactgaatgcactacaaacttcactgggaattgaccgactggtcatcctaggcttcccatgtaat caatttggaaaacaagaacctggacaaaattctgaaatccttcaaggaataaaacacatcagaccaggaggaggctttgt ccccaatttccaactctttcaaaaaggtgatgtaaatggggagaacgaacagagaatttacacctttctgaagaactcct gtccaccagttgtggaaaattttggtgaccctgcaaaactcttctggtcacctatgaagatccatgacattaagtggaac tttgagaaatttttggtgaatcctcaaggaaagcccgtgatgaggtggtttcaacggacaaatgtttccagtgtaaagaa tgatattataagatacatgaggaaaaatggatagactccgtacgaacgaaaatggatttagggaggggaggcaggctgca gacatatccagacatattcattttcttctgtcaaaccaccaaacatccaaatttcctttattcaaagctaaaataaggtt aagacagaattcaccttacagggtgccaatttacatactaatattgctaaagatccatatcaaaatccttaatcttaact aacatgttttcaagcataactttataaaagcatgtcgatctgagtttactcaacgatacctttaatttccatggggtgga accagcatgtattgaaaaaccattttagtaaattctgatcctgctttaaacatgttacttgagcatgagtaaaacagacc aagataatctttgggttttgcatctctagtatattatggtactaaagaaacgtgaagactattcctcactttcattatga acatattgatgcagaatatactgtacaaattttaaaagcaacaaaattaagaatttttttttaaaaagtacaagctatac attggcccattgcgggtcacagtattaaagtcaatctagtttatttttagc |
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Protein
| Protein ID | habu1_s4037_g13262.t1 |
|---|---|
| Definition | - |
>habu1_s4037_g13262.t1 MPNLGQEQQEILTGLHLSHQHDEARSCLRAQPIPDRVKVDCYDSIQGSAHDYGALSISGQYLELNALQTSLGIDRLVILG FPCNQFGKQEPGQNSEILQGIKHIRPGGGFVPNFQLFQKGDVNGENEQRIYTFLKNSCPPVVENFGDPAKLFWSPMKIHD IKWNFEKFLVNPQGKPVMRWFQRTNVSSVKNDIIRYMRKNG |
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