Gene
| Gene Model ID | habu1_s4038_g13272 |
|---|---|
| Locus | habu1_scaffold4038 : 422056 ... 429615 : + |
| To GenomeBrowser | habu1_scaffold4038:422056..429615 |
| Genes list of scaffold | habu1_scaffold4038 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 40s ribosomal protein s14 | GO:0000028 GO:0000122 GO:0000184 GO:0003735 GO:0005730 GO:0005739 GO:0005925 GO:0006413 GO:0006414 GO:0006415 GO:0006417 GO:0006445 GO:0006614 GO:0009790 GO:0016020 GO:0016787 GO:0019083 GO:0022627 GO:0030490 GO:0045182 GO:0048027 GO:0048821 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4038_g13272.t1 | 1 | 1 | Ribosomal_S11 | 29 | 147 | 8.60005e-41 | 138.5 | 7.00649e-45 | 1.10001e-40 | 138.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4038_g13272.t1 | gi|602654012|ref|XP_007432854.1| | PREDICTED: 40S ribosomal protein S14 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s4038_g13272.t1 | gi|5032051|ref|NP_005608.1| | 40S ribosomal protein S14 [Homo sapiens] | 0.0 |
| habu1_s4038_g13272.t1 | gi|441613683|ref|XP_004088161.1| | 0.0 | |
| habu1_s4038_g13272.t1 | gi|558228825|ref|XP_006138302.1| | PREDICTED: 40S ribosomal protein S14 [Pelodiscus sinensis] | 0.0 |
| habu1_s4038_g13272.t1 | gi|41152464|ref|NP_956320.1| | 40S ribosomal protein S14 [Danio rerio] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 679.1 |
| Venom grand-1 | 2691.7 |
| Pit, infrared sensing | 1309.6 |
| Nose | 821.2 |
| Brain-1 | 199.1 |
| Eye | 769.1 |
| fetal fibroblast | 822.4 |
| venom gland-2 | 1616.9 |
| Brain-2 | 140.5 |
| Spleen | 1062.4 |
| Lung | 1036.6 |
| Liver | 1875.1 |
| Kidney | 1531.6 |
| Pancreas | 1596.6 |
| Small intestine | 1500.2 |
| Large intestine | 1017.7 |
| Stomach | 1387.0 |
| heart | 821.0 |
| ovary | 338.7 |
| cheek muscle | 856.4 |
Transcript
| Transcript ID | habu1_s4038_g13272.t1 |
|---|---|
| Definition | - |
>habu1_s4038_g13272.t1 ctagctgtgtgctcattttctccaacgagagaacgtctcttttggaaagagtgacctcccggtagggcctctccgcaaag tatttccgggtggtagagcgtgacctctgccctcgtgacgttgttttctccttttccggtgctgcctgccgcctgccgag acgctcgaaaatggctccccgtaagggtaaggaaaagaaggaagagcaggttataagtttgggaccacaggttgctgaag gagaaaatgtgtttggagtttgccacatcttcgcttccttcaatgatacatttgtccatgtaactgacctgtctggcaag gaaactatctgccgagtaactggtggcatgaaagtgaaggccgacagggatgagtcttctccttatgccgctatgctggc tgcccaagatgtagcacaaagatgcaaggagctgggaatcactgccctccatatcaaactgcgggctacgggtggaaata ggacaaaaactcctggacctggagctcagtcagctctccgggctttggctcggtctggcatgaagattgggcgcattgag gatgttacccccattccttcagacagcactcgcagaaagggaggtcgccgtggtcgtcgtctgtaaaatagtggctgttg tatttcatcattaaagctttccaataaatctccattc |
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Protein
| Protein ID | habu1_s4038_g13272.t1 |
|---|---|
| Definition | - |
>habu1_s4038_g13272.t1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQD VAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL |
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