Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s4038_g13274
Locus habu1_scaffold4038 : 460917 ... 513447 : -
To GenomeBrowser habu1_scaffold4038:460917..513447
Genes list of scaffold habu1_scaffold4038

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 9.1
Venom grand-1 17.7
Pit, infrared sensing 12.8
Nose 11.0
Brain-1 7.8
Eye 10.6
fetal fibroblast 45.9
venom gland-2 39.7
Brain-2 8.3
Spleen 16.9
Lung 9.6
Liver 10.8
Kidney 8.6
Pancreas 29.8
Small intestine 10.5
Large intestine 9.0
Stomach 13.8
heart 10.7
ovary 31.2
cheek muscle 13.5

Transcript
Transcript IDhabu1_s4038_g13274.t1
Definition-
>habu1_s4038_g13274.t1
gtcatgcgtgtgggatagaggttgttgcttccccacccccacacgcgcggcgagagcatgacggcagctgagagagagca
gaaagagctgctggctctgatgcaccagcagttggtccaaatgggttatgagagagcagccaaggagttgctggagcaga
gcggccagaagactttcccgtcatctcatatttctctaaaagagatcatcgctcagtggagaaagactttcttacaaaat
cgaaaaccaaaaaagaccatagaaaccacgagaggcactccagtaaagatcagaattcctgaccccaagagcagctctga
gagctcagaggaggaggagcaagcagcaggaaccgtaaaaaataatctgcctgccaataacagcaccaagtcaacaaaga
cagtaactaaagaagagagtagcagcgaagattcagattcatcttctgaagaggaagaggaagcagatgccaaaatgact
gacaaaaaccccgtggctaggaacaaaactgaacttctgcaactggctgatcaaaatgctaattctgtcccaggaaaggg
ggtgactgttgctgctgcccaagcaaaaggagagcagaacaaatctgcttcaaataagaccctgcctccagctgcgagaa
aagcagggccaaataaagttctttctagcaaagcaggacctcctgtgcagtcactgatttcaggagggcaaaaaacaaca
cagaccacaaagacagcagagagctccgaaagcagcagcagcagcagcagcagctcatctgagagtgaggaagaaacagc
tttgaccccagcaaaagccccaccttccaaaccagctttaaagaaggcggcgagcacaagcaaggactcaagtgatgatt
ctgactctgaagacgggacaaaagcaccaacagtccaaattaaagcagctgtgcaaaattccccaatcagtagtccactg
ctgaacaagtcaccagtcactcctggatattctgcaagaaatacagtaaaggtaactacagcaaaacaagtcagtgcaaa
atctggaaatgcaaacagaagctcagaatcaacagacacttcagaaactactgactcatcggataatgagactaaggcac
ctgcttcagtatcacaggccttcaaagcaccagcgaaaaatgcagctgcaagtccattaaagaagacagtttctgcttct
gttccatcgaaatccacccagaaggcccccacaaccagcttatcaaaaccaccgcctccttcaaaagaagctcagagctc
agacagcagtgactcatcatctgagagtgacaatgagactctgccggttcccataagtcagaagagattagcaactccac
acccttctgtgaggaccagacaaaatcaggccaatcagcctgggatcctatccaaagctgcaccaggtgctttgaaggag
aaggaagcacagaatgaaagcagcagcagcagcagctcatctgacagcgaggatgaaactgaccttacaacaagcaaact
gccggctccaccagcccccaaagcaactcgtgcagttcaaagtgtaggtacggtgaagccccagcctccaaagggatccc
atcagaaggcccagcagagcgaagatagtagtgaagattcaagtgatgactctgactccgaggaagatagagtggtcact
cagaaaccagcaggtaagcccgctgccagtcctgtgaaaagcgtgacagccaagaacgcagggctcgcatcaagcaaacc
tcagccagcggggaaagcgggggcaacctcaacaaaagcaggaactgcccctgttcccaaaatctccaagagctcagata
gcagcagctctgattcttccgatggcaaagaagctgagaagccagcaaagcagcctcctattcaccccttttttaagcag
atgactgctaaagtggccactccctcaggaaagggcgtacagaccaacttaaatacatccggtgctgcttccaacaaatc
ccagagttctgccacaaaagcaacagggaaggaagaacaaattccctcccaaaaggctaaactgagccagggacaggctc
cggctgttaagtcccctggaatcaccgtacgtaaggagagttcctcagacagctcctcggacagcagtgaggaagaagca
gaagctttgacaacagccaagcctccggcactgcctgccacccagcagaaacaagaggcaaaaaaagagtcagagagctc
atctgaggagtccagtgatgaagaacaagaagcctctcagtctcttttaacagggctatcaggtcctcacaagatccagg
catccactgtggcagcaggtcctctgctatccaaacagggttctgggaaagttagtagtctgactgccagtgctgctcaa
gcaaagtctcctgggaagccagctcctgctgatagcacatcatcgactgacagctcttcaagcgatagtgaagagatcac
ctcgttgccttcttctggaaaggacgcagcggctgctaagggaaaggggccagggaaacgaggactggagagcaccagct
ccaagccgcccccggcaaagaaagctgccgcaaaagctcagagcaatggccaagcccaagagacatctgcggcacccttg
ccagaatcacttgctccatcgttcaaagctctccctgggaacaaggaacaaggaacccaaaaaggtgcccaggctaaccc
tgtggcaaaggccaagacatccaaaactggaaagaaagagaagccatccaagaaacggaaactggccgatggggacactg
gccctggggtttcaaagagcaagaagcttaaaatgcagagcgaggaagagatgccggtaaagaagaagaagaagaagaag
aaatccaagtcttcagacagcatcaaatcaacaaagaaaaaagacagcaaagaaaagaagtctgataaaaagaaaaagaa
gagaaaaaatgtggagagacctgatgcagatgggtcacagaagaaaaagaagaaaaagaagaaaacggataaccttcaaa
aagaggcatgatcacatggccttgtaattcaacgtgaagaatggtagtacattcatcagaaaggaattattcatttatat
ttttaaacaacaaaaccaaatgtcagagattgtatttaacttataactatttttactgatgacttttaaagctaagaaac
tgtgcttcaagtgacctggatatgggcttggtagaaggatacaacttgtaccactgagcaaagtgatctggatgtctgaa
gagatctcagaagaggcatgtgcagagacaaaaaagttcgttttgtttactgaggaatttttacattgctgtttctcctt
cctttcttccctttccttgacacttaagagttatatttttaaagtaacacctcatcccttccctcctgctaatttttttt
aaatcaactttttattttcatttttaggaagggacatcctttttctctctttatgtccagcatgtacaaaattgtgttgt
ctctggattggctttctgtctcatccttcctctttttattaataaaaaaaaaagattttgactggaaa
Transcript IDhabu1_s4038_g13274.t2
Definition-
>habu1_s4038_g13274.t2
gtcatgcgtgtgggatagaggttgttgcttccccacccccacacgcgcggcgagagcatgacggcagctgagagagagca
gaaagagctgctggctctgatgcaccagcagttggtccaaatgggttatgagagagcagccaaggagttgctggagcaga
gcggccagaagactttcccgtcatctcatatttctctaaaagagatcatcgctcagtggagaaagactttcttacaaaat
cgaaaaccaaaaaagaccatagaaaccacgagaggcactccagtaaagatcagaattcctgaccccaagagcagctctga
gagctcagaggaggaggagcaagcagcaggaaccgtaaaaaataatctgcctgccaataacagcaccaagtcaacaaaga
cagtaactaaagaagagagtagcagcgaagattcagattcatcttctgaagaggaagaggaagcagatgccaaaatgact
gacaaaaaccccgtggctaggaacaaaactgaacttctgcaactggctgatcaaaatgctaattctgtcccaggaaaggg
ggtgactgttgctgctgcccaagcaaaaggagagcagaacaaatctgcttcaaataagaccctgcctccagctgcgagaa
aagcagggccaaataaagttctttctagcaaagcaggacctcctgtgcagtcactgatttcaggagggcaaaaaacaaca
cagaccacaaagacagcagagagctccgaaagcagcagcagcagcagcagcagctcatctgagagtgaggaagaaacagc
tttgaccccagcaaaagccccaccttccaaaccagctttaaagaaggcggcgagcacaagcaaggactcaagtgatgatt
ctgactctgaagacgggacaaaagcaccaacagtccaaattaaagcagctgtgcaaaattccccaatcagtagtccactg
ctgaacaagtcaccagtcactcctggatattctgcaagaaatacagtaaaggtaactacagcaaaacaagtcagtgcaaa
atctggaaatgcaaacagaagctcagaatcaacagacacttcagaaactactgactcatcggataatgagactaaggcac
ctgcttcagtatcacaggccttcaaagcaccagcgaaaaatgcagctgcaagtccattaaagaagacagtttctgcttct
gttccatcgaaatccacccagaaggcccccacaaccagcttatcaaaaccaccgcctccttcaaaagaagctcagagctc
agacagcagtgactcatcatctgagagtgacaatgagactctgccggttcccataagtcagaagaaggcccccgcaacca
gcctatcaaaaccaccgcctccttcaaaagaagctcagagctcagacagcagtgactcatcatctgagagtgacaatgag
actctgccggttcccataagtcagaagagattagcaactccacacccttctgtgaggaccagacaaaatcaggccaatca
gcctgggatcctatccaaagctgcaccaggtgctttgaaggagaaggaagcacagaatgaaagcagcagcagcagcagct
catctgacagcgaggatgaaactgaccttacaacaagcaaactgccggctccaccagcccccaaagcaactcgtgcagtt
caaagtgtaggtacggtgaagccccagcctccaaagggatcccatcagaaggcccagcagagcgaagatagtagtgaaga
ttcaagtgatgactctgactccgaggaagatagagtggtcactcagaaaccagcaggtaagcccgctgccagtcctgtga
aaagcgtgacagccaagaacgcagggctcgcatcaagcaaacctcagccagcggggaaagcgggggcaacctcaacaaaa
gcaggaactgcccctgttcccaaaatctccaagagctcagatagcagcagctctgattcttccgatggcaaagaagctga
gaagccagcaaagcagcctcctattcaccccttttttaagcagatgactgctaaagtggccactccctcaggaaagggcg
tacagaccaacttaaatacatccggtgctgcttccaacaaatcccagagttctgccacaaaagcaacagggaaggaagaa
caaattccctcccaaaaggctaaactgagccagggacaggctccggctgttaagtcccctggaatcaccgtacgtaagga
gagttcctcagacagctcctcggacagcagtgaggaagaagcagaagctttgacaacagccaagcctccggcactgcctg
ccacccagcagaaacaagaggcaaaaaaagagtcagagagctcatctgaggagtccagtgatgaagaacaagaagcctct
cagtctcttttaacagggctatcaggtcctcacaagatccaggcatccactgtggcagcaggtcctctgctatccaaaca
gggttctgggaaagttagtagtctgactgccagtgctgctcaagcaaagtctcctgggaagccagctcctgctgatagca
catcatcgactgacagctcttcaagcgatagtgaagagatcacctcgttgccttcttctggaaaggacgcagcggctgct
aagggaaaggggccagggaaacgaggactggagagcaccagctccaagccgcccccggcaaagaaagctgccgcaaaagc
tcagagcaatggccaagcccaagagacatctgcggcacccttgccagaatcacttgctccatcgttcaaagctctccctg
ggaacaaggaacaaggaacccaaaaaggtgcccaggctaaccctgtggcaaaggccaagacatccaaaactggaaagaaa
gagaagccatccaagaaacggaaactggccgatggggacactggccctggggtttcaaagagcaagaagcttaaaatgca
gagcgaggaagagatgccggtaaagaagaagaagaagaagaagaaatccaagtcttcagacagcatcaaatcaacaaaga
aaaaagacagcaaagaaaagaagtctgataaaaagaaaaagaagagaaaaaatgtggagagacctgatgcagatgggtca
cagaagaaaaagaagaaaaagaagaaaacggataaccttcaaaaagaggcatgatcacatggccttgtaattcaacgtga
agaatggtagtacattcatcagaaaggaattattcatttatatttttaaacaacaaaaccaaatgtcagagattgtattt
aacttataactatttttactgatgacttttaaagctaagaaactgtgcttcaagtgacctggatatgggcttggtagaag
gatacaacttgtaccactgagcaaagtgatctggatgtctgaagagatctcagaagaggcatgtgcagagacaaaaaagt
tcgttttgtttactgaggaatttttacattgctgtttctccttcctttcttccctttccttgacacttaagagttatatt
tttaaagtaacacctcatcccttccctcctgctaattttttttaaatcaactttttattttcatttttaggaagggacat
cctttttctctctttatgtccagcatgtacaaaattgtgttgtctctggattggctttctgtctcatccttcctcttttt
attaataaaaaaaaaagattttgactggaaa

Protein
Protein IDhabu1_s4038_g13274.t1
Definition-
>habu1_s4038_g13274.t1
MTAAEREQKELLALMHQQLVQMGYERAAKELLEQSGQKTFPSSHISLKEIIAQWRKTFLQNRKPKKTIETTRGTPVKIRI
PDPKSSSESSEEEEQAAGTVKNNLPANNSTKSTKTVTKEESSSEDSDSSSEEEEEADAKMTDKNPVARNKTELLQLADQN
ANSVPGKGVTVAAAQAKGEQNKSASNKTLPPAARKAGPNKVLSSKAGPPVQSLISGGQKTTQTTKTAESSESSSSSSSSS
SESEEETALTPAKAPPSKPALKKAASTSKDSSDDSDSEDGTKAPTVQIKAAVQNSPISSPLLNKSPVTPGYSARNTVKVT
TAKQVSAKSGNANRSSESTDTSETTDSSDNETKAPASVSQAFKAPAKNAAASPLKKTVSASVPSKSTQKAPTTSLSKPPP
PSKEAQSSDSSDSSSESDNETLPVPISQKRLATPHPSVRTRQNQANQPGILSKAAPGALKEKEAQNESSSSSSSSDSEDE
TDLTTSKLPAPPAPKATRAVQSVGTVKPQPPKGSHQKAQQSEDSSEDSSDDSDSEEDRVVTQKPAGKPAASPVKSVTAKN
AGLASSKPQPAGKAGATSTKAGTAPVPKISKSSDSSSSDSSDGKEAEKPAKQPPIHPFFKQMTAKVATPSGKGVQTNLNT
SGAASNKSQSSATKATGKEEQIPSQKAKLSQGQAPAVKSPGITVRKESSSDSSSDSSEEEAEALTTAKPPALPATQQKQE
AKKESESSSEESSDEEQEASQSLLTGLSGPHKIQASTVAAGPLLSKQGSGKVSSLTASAAQAKSPGKPAPADSTSSTDSS
SSDSEEITSLPSSGKDAAAAKGKGPGKRGLESTSSKPPPAKKAAAKAQSNGQAQETSAAPLPESLAPSFKALPGNKEQGT
QKGAQANPVAKAKTSKTGKKEKPSKKRKLADGDTGPGVSKSKKLKMQSEEEMPVKKKKKKKKSKSSDSIKSTKKKDSKEK
KSDKKKKKRKNVERPDADGSQKKKKKKKKTDNLQKEA
Protein IDhabu1_s4038_g13274.t2
Definition-
>habu1_s4038_g13274.t2
MTAAEREQKELLALMHQQLVQMGYERAAKELLEQSGQKTFPSSHISLKEIIAQWRKTFLQNRKPKKTIETTRGTPVKIRI
PDPKSSSESSEEEEQAAGTVKNNLPANNSTKSTKTVTKEESSSEDSDSSSEEEEEADAKMTDKNPVARNKTELLQLADQN
ANSVPGKGVTVAAAQAKGEQNKSASNKTLPPAARKAGPNKVLSSKAGPPVQSLISGGQKTTQTTKTAESSESSSSSSSSS
SESEEETALTPAKAPPSKPALKKAASTSKDSSDDSDSEDGTKAPTVQIKAAVQNSPISSPLLNKSPVTPGYSARNTVKVT
TAKQVSAKSGNANRSSESTDTSETTDSSDNETKAPASVSQAFKAPAKNAAASPLKKTVSASVPSKSTQKAPTTSLSKPPP
PSKEAQSSDSSDSSSESDNETLPVPISQKKAPATSLSKPPPPSKEAQSSDSSDSSSESDNETLPVPISQKRLATPHPSVR
TRQNQANQPGILSKAAPGALKEKEAQNESSSSSSSSDSEDETDLTTSKLPAPPAPKATRAVQSVGTVKPQPPKGSHQKAQ
QSEDSSEDSSDDSDSEEDRVVTQKPAGKPAASPVKSVTAKNAGLASSKPQPAGKAGATSTKAGTAPVPKISKSSDSSSSD
SSDGKEAEKPAKQPPIHPFFKQMTAKVATPSGKGVQTNLNTSGAASNKSQSSATKATGKEEQIPSQKAKLSQGQAPAVKS
PGITVRKESSSDSSSDSSEEEAEALTTAKPPALPATQQKQEAKKESESSSEESSDEEQEASQSLLTGLSGPHKIQASTVA
AGPLLSKQGSGKVSSLTASAAQAKSPGKPAPADSTSSTDSSSSDSEEITSLPSSGKDAAAAKGKGPGKRGLESTSSKPPP
AKKAAAKAQSNGQAQETSAAPLPESLAPSFKALPGNKEQGTQKGAQANPVAKAKTSKTGKKEKPSKKRKLADGDTGPGVS
KSKKLKMQSEEEMPVKKKKKKKKSKSSDSIKSTKKKDSKEKKSDKKKKKRKNVERPDADGSQKKKKKKKKTDNLQKEA

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495