Gene
| Gene Model ID | habu1_s4089_g13405 |
|---|---|
| Locus | habu1_scaffold4089 : 84241 ... 93425 : - |
| To GenomeBrowser | habu1_scaffold4089:84241..93425 |
| Genes list of scaffold | habu1_scaffold4089 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| t-box transcription factor tbx10 | GO:0006351 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4089_g13405.t1 | 2 | 1 | T-box | 1 | 34 | 8.9e-37 | 126.3 | 1.9e-12 | 2.8e-08 | 33.4 |
| habu1_s4089_g13405.t1 | 2 | 2 | T-box | 35 | 105 | 8.9e-37 | 126.3 | 3.9e-31 | 5.8e-27 | 94.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4089_g13405.t1 | gi|637249269|ref|XP_003215096.2| | PREDICTED: T-box transcription factor TBX10 [Anolis carolinensis] | 0.0 |
| habu1_s4089_g13405.t1 | gi|591388216|ref|XP_007068521.1| | PREDICTED: T-box transcription factor TBX1-like [Chelonia mydas] | 0.0 |
| habu1_s4089_g13405.t1 | gi|697835622|ref|XP_009638168.1| | PREDICTED: T-box transcription factor TBX1 [Egretta garzetta] | 0.0 |
| habu1_s4089_g13405.t1 | gi|669278309|ref|XP_008631494.1| | PREDICTED: T-box transcription factor TBX10 [Corvus brachyrhynchos] | 0.0 |
| habu1_s4089_g13405.t1 | gi|471403268|ref|XP_004383947.1| | PREDICTED: T-box transcription factor TBX10 [Trichechus manatus latirostris] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.2 |
| Brain-1 | 0.1 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.1 |
| Spleen | 0.0 |
| Lung | 0.7 |
| Liver | 0.6 |
| Kidney | 3.5 |
| Pancreas | 0.2 |
| Small intestine | 0.1 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.1 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s4089_g13405.t1 |
|---|---|
| Definition | - |
>habu1_s4089_g13405.t1 gcatcatgtctgctgggcacaacagcagactttgagcaatatggaaccaatggagcagggaagcaaagtggcagctccca gttagccaagaaaaaccaatgtgtgtctggtgtcactgtgcaactggaaatgaggagtctttgggaggagttcaacagcc ttggcaccgagatgattgtcaccaaggcaggacggaggatgtttcccaccttccaggtgaagatatcaggcatggaccct ttggctgactatgtgcttctaatggattttgtccctttggatgacaagagataccggtacgggaccatcattctgaactc catgcacagataccagccccgtttccatgtggtggtggtggacccacgtccagatagtgagcgttatgcccaggagaatt tcaaatctttcatctttacagagactcaatttatggcagtgaccgcctatcagaaccatcggatcacccagctgaaaatt gctagtaacccctttgctaaaggtttccgggagtgtgagccggatgactggccgggatcctcagggcaactactgagttg tttatcacggaatgggaatgcctcctccttagcccaatttcaagagattccagagaaagggttttccagcaatcaccacc ttcctcctgccatcctcagagaagcttcccaattccagcatcaacctctggtgacatcagccagcctcccagatgtatgc attgcacgacgacccttgaatgaagccccaggggccctgccctacaagcatctttcctatcacagcttctacgtgggagc tcgaactggggccgccccttataccctacctagcaaccgggcaaccagcttccatactgtcaacatttacacagctggtg gttatgagcaatgagaaagcaggagcagccattccccgtcccctggcccagttcagatcaaactttcctaaagaacccct ttcatctcccgatgatgctttttatgacactgcctgccaggaggtttcgcccattatacaacttcctcttcattgaaggc attttttatgcccaactgatacttatagcttatcccctgccttagattaacagagttgcccaacatttcctcaattacat attaaataattatattatacatagatac |
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Protein
| Protein ID | habu1_s4089_g13405.t1 |
|---|---|
| Definition | - |
>habu1_s4089_g13405.t1 MFPTFQVKISGMDPLADYVLLMDFVPLDDKRYRYGTIILNSMHRYQPRFHVVVVDPRPDSERYAQENFKSFIFTETQFMA VTAYQNHRITQLKIASNPFAKGFRECEPDDWPGSSGQLLSCLSRNGNASSLAQFQEIPEKGFSSNHHLPPAILREASQFQ HQPLVTSASLPDVCIARRPLNEAPGALPYKHLSYHSFYVGARTGAAPYTLPSNRATSFHTVNIYTAGGYEQ |
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