Gene
| Gene Model ID | habu1_s4089_g13407 |
|---|---|
| Locus | habu1_scaffold4089 : 114408 ... 133925 : - |
| To GenomeBrowser | habu1_scaffold4089:114408..133925 |
| Genes list of scaffold | habu1_scaffold4089 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcium-binding protein 4 | GO:0003407 GO:0042461 GO:0060042 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4089_g13407.t1 | 3 | 1 | EF-hand_8 | 76 | 114 | 2.9e-24 | 84.4 | 3.5e-08 | 5.1e-05 | 22.7 |
| habu1_s4089_g13407.t1 | 3 | 1 | EF-hand_1 | 89 | 117 | 1.3e-28 | 96.1 | 2.9e-10 | 4.3e-07 | 28.7 |
| habu1_s4089_g13407.t1 | 3 | 1 | EF-hand_6 | 89 | 117 | 3.3e-22 | 76.3 | 3.9e-10 | 5.8e-07 | 28.8 |
| habu1_s4089_g13407.t1 | 2 | 1 | EF-hand_7 | 90 | 150 | 3.9e-21 | 74.9 | 5.2e-09 | 7.7e-06 | 25.9 |
| habu1_s4089_g13407.t1 | 3 | 1 | EF-hand_5 | 92 | 110 | 5.8e-20 | 69.6 | 9.2e-07 | 0.0014 | 17.9 |
| habu1_s4089_g13407.t1 | 3 | 2 | EF-hand_8 | 138 | 186 | 2.9e-24 | 84.4 | 8.4e-11 | 1.3e-07 | 31.1 |
| habu1_s4089_g13407.t1 | 3 | 2 | EF-hand_1 | 166 | 193 | 1.3e-28 | 96.1 | 5.8e-11 | 8.6e-08 | 30.9 |
| habu1_s4089_g13407.t1 | 3 | 2 | EF-hand_6 | 166 | 192 | 3.3e-22 | 76.3 | 2.3e-09 | 3.4e-06 | 26.4 |
| habu1_s4089_g13407.t1 | 2 | 2 | EF-hand_7 | 168 | 225 | 3.9e-21 | 74.9 | 5.5e-17 | 8.1e-14 | 51.5 |
| habu1_s4089_g13407.t1 | 3 | 2 | EF-hand_5 | 168 | 190 | 5.8e-20 | 69.6 | 3.6e-10 | 5.3e-07 | 28.6 |
| habu1_s4089_g13407.t1 | 3 | 3 | EF-hand_8 | 186 | 228 | 2.9e-24 | 84.4 | 1.5e-12 | 2.2e-09 | 36.7 |
| habu1_s4089_g13407.t1 | 1 | 1 | EF-hand_4 | 188 | 228 | 7.7e-06 | 25.6 | 2.9e-07 | 0.00043 | 19.9 |
| habu1_s4089_g13407.t1 | 3 | 3 | EF-hand_1 | 203 | 231 | 1.3e-28 | 96.1 | 3.8e-11 | 5.6e-08 | 31.5 |
| habu1_s4089_g13407.t1 | 3 | 3 | EF-hand_6 | 204 | 229 | 3.3e-22 | 76.3 | 2.3e-06 | 0.0034 | 17.1 |
| habu1_s4089_g13407.t1 | 3 | 3 | EF-hand_5 | 205 | 225 | 5.8e-20 | 69.6 | 1.4e-08 | 2.1e-05 | 23.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4089_g13407.t1 | gi|637249264|ref|XP_008110682.1| | PREDICTED: calcium-binding protein 4 [Anolis carolinensis] | 0.0 |
| habu1_s4089_g13407.t1 | gi|363734020|ref|XP_003641327.1| | PREDICTED: calcium-binding protein 4 isoform X1 [Gallus gallus] | 0.0 |
| habu1_s4089_g13407.t1 | gi|696993609|ref|XP_009563795.1| | PREDICTED: calcium-binding protein 4 [Cuculus canorus] | 0.0 |
| habu1_s4089_g13407.t1 | gi|694830491|ref|XP_009459232.1| | PREDICTED: calcium-binding protein 2-like [Nipponia nippon] | 0.0 |
| habu1_s4089_g13407.t1 | gi|524997789|ref|XP_005046662.1| | PREDICTED: calcium-binding protein 4 [Ficedula albicollis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.1 |
| Brain-1 | 0.0 |
| Eye | 103.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 0.0 |
| Lung | 0.1 |
| Liver | 0.9 |
| Kidney | 1.6 |
| Pancreas | 0.0 |
| Small intestine | 0.5 |
| Large intestine | 0.1 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 1.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s4089_g13407.t1 |
|---|---|
| Definition | - |
>habu1_s4089_g13407.t1 gtaagtcgaggactttccctgcccgggagcgccgcacatgcgtggttccgccccctgcgccggccgaggcgtagctggnn nnnnnnnnnnnnnnnnnnnnnncggcagagacggagcaggccgaccaccagctggcccagcccaagggagctttctctct gctccttcctgggggtgaaatctaagaggattaccttggctttcatactcagaggcttcatacagggttgcctatctcag agaagcgcacctgtcccatgccacacaagaagccagtggagacagagggcctacccaaggacaaagtggaagaagggaag cagccttccaggcatgacagtgagtccaaggacagcaacactgaaagccctgcctctgagcaaagctcacagtcgggtcc tcataccaagcacagcaagaagcatcaagatgaccctcatgcagctgccaccaaggcctattcccctttcctcaacaagg tctttggcaaggaaagagagctttccccgttggaactggatgagctgctagatgctttcaaggaatttgacacggatgag gatggctacctcagctacaaagatctgggcgattgcatgcgaaccatgggctacatgcccacagagatggagctgctgga gatctcccagcacatcaaaatgcgcatgggaggacgtatagattttgaggagtttgtagagatgatgagccccaaactgc ttgaagaaacagctcatatggtgggcgtgagggagctgaagatcgccttccgtgagtttgatacagatggagatggaact atcagcagttttgaactgcgccaggctgtgactgccctcttaggtgagcaactcaatgcccaggagttggacgagatcct gcaagatgtagatctcaatggagatggaaaagtggactttgatgagtttgtgatgatgctgtcatccatgtaacaagaac cagaggagaaggaatggggatgtctttatttccagaattaccttgctcagtaatgggaaggaattggtttctgctgctag cttttttcacttgctggagataggaacatcacaataggaggtgaaattctctttccccaagtctggatccaaagctgcaa agtacctcagggagcaggtgctcactgtgtgtgcaggaagattttgagttttgaggcaaaatggctgggctgagcctaga gaactcacctggcaccatctttgtttgttaggaacagaaagcacttcagggcccataccagtgtggctaggcctgacaaa ttctgtccaggtatggagccatacccaggtgtactttgatttcctctgacatttcccccccccatcagctcaaaattcct ggagacttaaaataaactgtttgaagttaatagttcat |
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Protein
| Protein ID | habu1_s4089_g13407.t1 |
|---|---|
| Definition | - |
>habu1_s4089_g13407.t1 MPHKKPVETEGLPKDKVEEGKQPSRHDSESKDSNTESPASEQSSQSGPHTKHSKKHQDDPHAAATKAYSPFLNKVFGKER ELSPLELDELLDAFKEFDTDEDGYLSYKDLGDCMRTMGYMPTEMELLEISQHIKMRMGGRIDFEEFVEMMSPKLLEETAH MVGVRELKIAFREFDTDGDGTISSFELRQAVTALLGEQLNAQELDEILQDVDLNGDGKVDFDEFVMMLSSM |
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