Gene
| Gene Model ID | habu1_s4089_g13410 |
|---|---|
| Locus | habu1_scaffold4089 : 170019 ... 181835 : - |
| To GenomeBrowser | habu1_scaffold4089:170019..181835 |
| Genes list of scaffold | habu1_scaffold4089 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribosomal protein s6 kinase beta-2 | EC:2.7.11.0 GO:0004674 GO:0005524 GO:0006468 GO:0009069 GO:0043491 GO:0045948 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4089_g13410.t2 | 1 | 1 | Pkinase | 65 | 326 | 0.0 | 236.2 | 0.0 | 0.0 | 235.9 |
| habu1_s4089_g13410.t2 | 1 | 1 | Pkinase_Tyr | 66 | 310 | 7.9e-35 | 120.1 | 2.7e-38 | 1.0e-34 | 119.8 |
| habu1_s4089_g13410.t2 | 1 | 1 | Pkinase_C | 348 | 391 | 1.0e-08 | 35.5 | 2.7e-12 | 1.0e-08 | 35.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4089_g13410.t2 | gi|637248701|ref|XP_008109705.1| | PREDICTED: ribosomal protein S6 kinase beta-2 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s4089_g13410.t2 | gi|530572063|ref|XP_005280593.1| | PREDICTED: ribosomal protein S6 kinase beta-2 [Chrysemys picta bellii] | 0.0 |
| habu1_s4089_g13410.t2 | gi|543371839|ref|XP_005529141.1| | PREDICTED: ribosomal protein S6 kinase beta-2 [Pseudopodoces humilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.0 |
| Venom grand-1 | 7.5 |
| Pit, infrared sensing | 5.5 |
| Nose | 7.1 |
| Brain-1 | 5.4 |
| Eye | 6.1 |
| fetal fibroblast | 5.0 |
| venom gland-2 | 9.8 |
| Brain-2 | 5.0 |
| Spleen | 7.3 |
| Lung | 8.2 |
| Liver | 8.6 |
| Kidney | 6.6 |
| Pancreas | 10.0 |
| Small intestine | 7.3 |
| Large intestine | 8.8 |
| Stomach | 5.9 |
| heart | 5.1 |
| ovary | 5.9 |
| cheek muscle | 7.0 |
Transcript
| Transcript ID | habu1_s4089_g13410.t1 |
|---|---|
| Definition | - |
>habu1_s4089_g13410.t1 atcgctgggcgggggaaaaggggtgacgaaaagcaaaggggcgtggcccggaagtccacggggtacttggggagcccccg atatggccggcgtcttcgacatcgacctggaaacggaggaagggagcgacggggaggagcctgaactgggggccttgttt tgtgccaggttattatgaggaaattgaaatctctgaaagcagtgtcaacaatggcccagaatgcattgggccccactgct ttgagctactgcgtgttttgggaaagggtggttatggcaaggtgttccaggtccggaaggtacaaggcacgaattctgga aaaatctttgccatgaaggtgttaaagaaagccaagattgcctgtaatgccaaggacacagcacacacaaaggctgagag aaatattctggaggccatcaaacacccattcatagtagacctcatctatgctttccagactggtggcaagctctacctca tcctggaatgtctcagtggaggggaactcttcatgcagctggagcgggaaggcatcttcctggaggacacagcctgtttc tatctgagcgagatcaccctggctcttggccatctccactttaacggcatcatttaccgggatcttaagccagagaacat aatgctaaacagccacgggcacattaaactgacggattttgggctttgcaaggaatccatccatgatggtgctgtcaccc acaccttttgtggcactatagaatacatggccccagaaatattgatgcgcagtggccacaatcgggctgttgattggtgg agccttggtaccctgatgtatgacatgctcacaggatcgcctccatttaccgctgaaaaccgcaaaaagacaattgacaa aatcctgaaaggcaagttgatgtttccaccctacttgacttcagatgctcgggatctgctcaggaagtttctcaaaagga accccaatcaacgaattgggggtgggccaggtgatgctgcagatgtgcagaaacacccattcttccgacacattaactgg gatgacttgttggccaggagagttgatccaccattccggccatttttgcaatcggaagatgatgtcagccagtttgacac ccgcttcactcgccagacacctgtggatagtcctgacgacggctctctcagcgagagtgccaatcaggcttttctgggat ttacctacgtggctccatctgtgctggaaagtatcaaagaagggtttttcttccaacccaagttgcgatctccacggcgt ctcaacagcagcccgcgcacacctgtcagcccactgaagttctcaccctttgagcccttcaagccaagcacaacggtaga gttaatggagctgtcagcaacccctcttgggcctgtactggaagtcacggctccattgcccatcaaaacaccttcaggca ccaaaaagaagaaaggccgaggacgggcacgataactgggcagcaaggagatctctggatatgcatcatcaggtggagca ctggggtgaggcaatgggtggtcaagattgtgtctgtgggacttcaagccctcctggaagtcccgttttacctttcactt cacagggccaccttcactcccagcgagaaagggatacctgatgttggtgcttccttgatgtc |
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| Transcript ID | habu1_s4089_g13410.t2 |
| Definition | - |
>habu1_s4089_g13410.t2 atcgctgggcgggggaaaaggggtgacgaaaagcaaaggggcgtggcccggaagtccacggggtacttggggagcccccg atatggccggcgtcttcgacatcgacctggaaacggaggaagggagcgacggggaggagcctgaactgggggccttggaa gtggaccccgattttcgtatcagtagctcagattttgtgccaggttattatgaggaaattgaaatctctgaaagcagtgt caacaatggcccagaatgcattgggccccactgctttgagctactgcgtgttttgggaaagggtggttatggcaaggtgt tccaggtccggaaggtacaaggcacgaattctggaaaaatctttgccatgaaggtgttaaagaaagccaagattgcctgt aatgccaaggacacagcacacacaaaggctgagagaaatattctggaggccatcaaacacccattcatagtagacctcat ctatgctttccagactggtggcaagctctacctcatcctggaatgtctcagtggaggggaactcttcatgcagctggagc gggaaggcatcttcctggaggacacagcctgtttctatctgagcgagatcaccctggctcttggccatctccactttaac ggcatcatttaccgggatcttaagccagagaacataatgctaaacagccacgggcacattaaactgacggattttgggct ttgcaaggaatccatccatgatggtgctgtcacccacaccttttgtggcactatagaatacatggccccagaaatattga tgcgcagtggccacaatcgggctgttgattggtggagccttggtaccctgatgtatgacatgctcacaggatcgcctcca tttaccgctgaaaaccgcaaaaagacaattgacaaaatcctgaaaggcaagttgatgtttccaccctacttgacttcaga tgctcgggatctgctcaggaagtttctcaaaaggaaccccaatcaacgaattgggggtgggccaggtgatgctgcagatg tgcagaaacacccattcttccgacacattaactgggatgacttgttggccaggagagttgatccaccattccggccattt ttgcaatcggaagatgatgtcagccagtttgacacccgcttcactcgccagacacctgtggatagtcctgacgacggctc tctcagcgagagtgccaatcaggcttttctgggatttacctacgtggctccatctgtgctggaaagtatcaaagaagggt ttttcttccaacccaagttgcgatctccacggcgtctcaacagcagcccgcgcacacctgtcagcccactgaagttctca ccctttgagcccttcaagccaagcacaacggtagagttaatggagctgtcagcaacccctcttgggcctgtactggaagt cacggctccattgcccatcaaaacaccttcaggcaccaaaaagaagaaaggccgaggacgggcacgataactgggcagca aggagatctctggatatgcatcatcaggtggagcactggggtgaggcaatgggtggtcaagattgtgtctgtgggacttc aagccctcctggaagtcccgttttacctttcacttcacagggccaccttcactcccagcgagaaagggatacctgatgtt ggtgcttccttgatgtc |
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Protein
| Protein ID | habu1_s4089_g13410.t1 |
|---|---|
| Definition | - |
>habu1_s4089_g13410.t1 MKVLKKAKIACNAKDTAHTKAERNILEAIKHPFIVDLIYAFQTGGKLYLILECLSGGELFMQLEREGIFLEDTACFYLSE ITLALGHLHFNGIIYRDLKPENIMLNSHGHIKLTDFGLCKESIHDGAVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGT LMYDMLTGSPPFTAENRKKTIDKILKGKLMFPPYLTSDARDLLRKFLKRNPNQRIGGGPGDAADVQKHPFFRHINWDDLL ARRVDPPFRPFLQSEDDVSQFDTRFTRQTPVDSPDDGSLSESANQAFLGFTYVAPSVLESIKEGFFFQPKLRSPRRLNSS PRTPVSPLKFSPFEPFKPSTTVELMELSATPLGPVLEVTAPLPIKTPSGTKKKKGRGRAR |
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| Protein ID | habu1_s4089_g13410.t2 |
| Definition | - |
>habu1_s4089_g13410.t2 MAGVFDIDLETEEGSDGEEPELGALEVDPDFRISSSDFVPGYYEEIEISESSVNNGPECIGPHCFELLRVLGKGGYGKVF QVRKVQGTNSGKIFAMKVLKKAKIACNAKDTAHTKAERNILEAIKHPFIVDLIYAFQTGGKLYLILECLSGGELFMQLER EGIFLEDTACFYLSEITLALGHLHFNGIIYRDLKPENIMLNSHGHIKLTDFGLCKESIHDGAVTHTFCGTIEYMAPEILM RSGHNRAVDWWSLGTLMYDMLTGSPPFTAENRKKTIDKILKGKLMFPPYLTSDARDLLRKFLKRNPNQRIGGGPGDAADV QKHPFFRHINWDDLLARRVDPPFRPFLQSEDDVSQFDTRFTRQTPVDSPDDGSLSESANQAFLGFTYVAPSVLESIKEGF FFQPKLRSPRRLNSSPRTPVSPLKFSPFEPFKPSTTVELMELSATPLGPVLEVTAPLPIKTPSGTKKKKGRGRAR |
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