Gene
| Gene Model ID | habu1_s4089_g13412 |
|---|---|
| Locus | habu1_scaffold4089 : 246021 ... 266845 : - |
| To GenomeBrowser | habu1_scaffold4089:246021..266845 |
| Genes list of scaffold | habu1_scaffold4089 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| Carabin, partial [Ophiophagus hannah] | GO:0031527 GO:0042147 GO:0050869 GO:0051534 GO:0070373 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4089_g13412.t1 | 1 | 1 | RabGAP-TBC | 107 | 303 | 0.0 | 176.0 | 0.0 | 0.0 | 174.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4089_g13412.t1 | gi|602636690|ref|XP_007425198.1| | PREDICTED: carabin [Python bivittatus] | 0.0 |
| habu1_s4089_g13412.t1 | gi|637248683|ref|XP_008109670.1| | PREDICTED: carabin [Anolis carolinensis] | 0.0 |
| habu1_s4089_g13412.t1 | gi|558115877|ref|XP_006113028.1| | PREDICTED: carabin [Pelodiscus sinensis] | 0.0 |
| habu1_s4089_g13412.t1 | gi|564231530|ref|XP_006260159.1| | PREDICTED: carabin [Alligator mississippiensis] | 0.0 |
| habu1_s4089_g13412.t1 | gi|557322321|ref|XP_006034254.1| | PREDICTED: carabin [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 1.0 |
| Nose | 1.5 |
| Brain-1 | 0.3 |
| Eye | 0.8 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.2 |
| Brain-2 | 0.3 |
| Spleen | 15.5 |
| Lung | 0.9 |
| Liver | 1.1 |
| Kidney | 0.4 |
| Pancreas | 0.2 |
| Small intestine | 2.4 |
| Large intestine | 3.2 |
| Stomach | 0.5 |
| heart | 0.2 |
| ovary | 0.6 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s4089_g13412.t1 |
|---|---|
| Definition | - |
>habu1_s4089_g13412.t1 gagattaaggatttgggattgtggtgtttgactgccagccagtgtttgtggattctgtcttttaattgacatgatatttg tcccacgtagaattgttgcaatagttactgtgaacatttagttccccaccccctttgccttgcccatttcatagagctat gtattacatcaggaaatggtttggggaggaaatagcttgcagaacctgtgaggaactcttgtcataacagtaagagtacg ttcatagaggcaattttctcttcagaagttcctgagccaagggcctgcagtcaacatgagataaatcacaaaatcgatgg tttcagttgattcaaaggatctgaatggtagggaaggatgtcaggtctttctctgtcggctgataatgtaagccaagcta tggcggaactatcagatgcctttgatttctccttgcgtgatgatgccagctctctgggctccgactctgagctgaatggc atggctccctatcgcaagacggatcgctttggctttattgggggcagtagcctccagaatggtcaagatcatcaccgcgt tgagctcatccgacaccgtgaaaccaaatggctggaaatgacagctcactgggagaaaaccatggcccggcgctatagga aggtaaagctgctgtgccgaaaaggaatcccttcctctttacgtgcacgctgttggcctctgttgtgtggaggacagacc aaaatggagaggagccctggaaagtaccaggaattgcttgaggtacctggtgatcctcagtgggtggagattatcacaaa ggacattcaccgccaattccctttccacgagatgttcctgtctcctgagggccctggacagcaggggctgttacagctgc tgaaagcctatactgtctatcggccccaagaaggttattgtcaagctcaaggaccagtgggtgccctgcttctcatgcac atgccaccagagcaagctttctggtgcctggtacagatctgcgaccactatctgcctggttactacagccccgaaatgca ggcgctggtgctagacagtgaaatttttacggctctcctccatcgtgtgtgtcccaaggcctttaagcacttgcagaagc atggagtggggcctttgatgtacatgcctgagtggttcctgtgcctctttgcccgcacgctgcccttccccacagtgttg agagtctgggacgccttcctgagtgagggggtcaaggtgttgtttcgtgttggtctgctgttagtccgcctagccctggg ctcctctgaaaaactacgtgactgttcaggattggtggagacactggagaagctacgcaacatcccacctcagtttctgc aagaagacagcttcatggctgaggtccatgatgtgcccatctcagagagtgacctggaacgtgaatgtagaatccaactg ggaaaactgtgcaaaactcagcctaaattccaatacagctcaaagcagcgcctttctggtgcaagggccatctttgacgt tcagcaactggaggatgcacagaacaataagacagagaaggaaattcactcacatactttccacatccccaaaatcaagg tagacccgcccccatcgtccccagaggagcagaagagggcctcggagatgcaaggtcagaaaaaagaacagaaaaggaag aagccggacacacggggaaagactttccatgtctttgagcatcccaggggtagaagggagagaaagctagaaccagaagc ctcaaagtgcaagtcgtctttttacttggaggcatgattctcactcagggcagtgaagacatggaactctgggacaacat catgcagcattttctcactgccctgctctggttaatggatgaattcagaagcttcgacatagcctgagttgaaggcaatc ctaaatttctagcaaaataaataaatgggtgggttttctaatttaggagcttcctctttccgaagccttcacctataacc ctgcttgaattaaaataagagatgggtagtcccatcctacatgtgatttgggatgtacataaagctatgagttacagata ttggtgtgtatgtgtgtagacacgatttagctatagtaagcttggtgaatttcaaagggcagagcaaatggatttcacta agtacccttcttcccatcactcagctcccaccaccaccaccccactcattttggcatagtgtcagaaggcgaacccttga taatttggaaacatggtagctctcatttagcaactgccttggacagaaagtggtgatgaaaaagttaattgtgtgggaat ctttgcagaatctgtaaagcaaaggaaagctgaagtaaaattgtaaaattgtgacgttttacttagtgactgctttgctt aacgaccaatttgctgatctccgttctggtcacttaacaaggactacttgtgtactacacatttccatctaccttttgct gtggatgttgtaatctaaagtccaggcctggcaatgaggagggaaaaagaggaagaactctaagatcttggatgaatgaa acctaatttgaaatacattgtgtttttttgaggtatttggcaccttgattctaagggggtaaaatttattgcacatgtat acataaaatagattcacagaatctaacttagtaaaataccaacaatgtgattttcctatatccataaaaaaaatagaaag ttgctctgattcagtgtggtaaaagggtgatggtggtatataattatttgcttccaggaaaagactgctttaaatgaaca aattaaagaaaatagaaaaggggtgaatcaattagtgtttaaaggaactaattataacaattactttttttaaaaaaacc aataacaaaagtaaaagatccacatgatcagtataaatatttataaggagttaatttaaattgttgagtttatcattaaa tctaattaccatttagcaacaa |
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Protein
| Protein ID | habu1_s4089_g13412.t1 |
|---|---|
| Definition | - |
>habu1_s4089_g13412.t1 MSGLSLSADNVSQAMAELSDAFDFSLRDDASSLGSDSELNGMAPYRKTDRFGFIGGSSLQNGQDHHRVELIRHRETKWLE MTAHWEKTMARRYRKVKLLCRKGIPSSLRARCWPLLCGGQTKMERSPGKYQELLEVPGDPQWVEIITKDIHRQFPFHEMF LSPEGPGQQGLLQLLKAYTVYRPQEGYCQAQGPVGALLLMHMPPEQAFWCLVQICDHYLPGYYSPEMQALVLDSEIFTAL LHRVCPKAFKHLQKHGVGPLMYMPEWFLCLFARTLPFPTVLRVWDAFLSEGVKVLFRVGLLLVRLALGSSEKLRDCSGLV ETLEKLRNIPPQFLQEDSFMAEVHDVPISESDLERECRIQLGKLCKTQPKFQYSSKQRLSGARAIFDVQQLEDAQNNKTE KEIHSHTFHIPKIKVDPPPSSPEEQKRASEMQGQKKEQKRKKPDTRGKTFHVFEHPRGRRERKLEPEASKCKSSFYLEA |
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