Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s4166_g13603
Locus habu1_scaffold4166 : 107617 ... 130845 : -
To GenomeBrowser habu1_scaffold4166:107617..130845
Genes list of scaffold habu1_scaffold4166

Annotation by Blast2GO
Annotation GO
fructose- -bisphosphatase isozyme 2 EC:3.1.3.11 GO:0006000 GO:0006013 GO:0006094 GO:0006096 GO:0006098 GO:0015976 GO:0016311 GO:0042132

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s4166_g13603.t1 1 1 FBPase 12 335 0.0 438.7 0.0 0.0 438.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s4166_g13603.t1 gi|602660995|ref|XP_007436158.1| PREDICTED: fructose-1,6-bisphosphatase isozyme 2 [Python bivittatus] 0.0
habu1_s4166_g13603.t1 gi|700320150|ref|XP_009916371.1| PREDICTED: fructose-1,6-bisphosphatase isozyme 2 [Haliaeetus albicilla] 0.0
habu1_s4166_g13603.t1 gi|723579591|ref|XP_010310044.1| PREDICTED: fructose-1,6-bisphosphatase isozyme 2 [Balearica regulorum gibbericeps] 0.0
habu1_s4166_g13603.t1 gi|698432964|ref|XP_009697591.1| PREDICTED: fructose-1,6-bisphosphatase isozyme 2 [Cariama cristata] 0.0
habu1_s4166_g13603.t1 gi|327263387|ref|XP_003216501.1| PREDICTED: fructose-1,6-bisphosphatase isozyme 2 [Anolis carolinensis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.1
Venom grand-1 2.9
Pit, infrared sensing 1.6
Nose 0.4
Brain-1 0.3
Eye 54.2
fetal fibroblast 0.1
venom gland-2 1.0
Brain-2 0.1
Spleen 0.1
Lung 0.4
Liver 2.1
Kidney 1.3
Pancreas 0.5
Small intestine 0.2
Large intestine 0.4
Stomach 1.3
heart 21.9
ovary 0.0
cheek muscle 40.0

Transcript
Transcript IDhabu1_s4166_g13603.t1
Definition-
>habu1_s4166_g13603.t1
aactttttttgcattgctggagctgcggtggacgcagcctccacatgatgtaaccggcccacgggctggcagtttgacac
ccctgatctagaacaaccagatctgggctagttactagatgaaagtgtctctttgctgatatcttgtaaccatctggata
tttgtggaccaaaccttgtagcctctccttgtgcttcagatctctagccaggcagatttctttaggcagagcaattttgt
ctctatctatttcaacttgataaacccttagattttcattaatgcatctccatcatttttggtggggaaaaaccaacatg
tcggatcaaagcccctttgaaacagatatgataaccctgaaccgatatgtcatggagaaaggacgacgggtgaaaggggc
aacaggagaactgacccagcttttgaactcaacgctcactgccatcaaggcaatctcatcagcagtccgaaaggcaggcc
ttgctcatatgtatggaatagcaggaagcatgaacgtgaccggggatgagcagaaaaaactggatgtgttgtccaattct
ctggttatcaacatgctccaatcctcctacagcacttgcgtcctggtctctgaggagaataaagaagcaataatcactcc
aaaagaaaagaggggtaaatatgtggtgtgctttgatccactagatggctcttccaatatagactgtttagcctcaatag
gaacaatatttgccatttataagaagacctctgaagatgagccttctgaaaaagacgccttacaacctggacgcaacatt
gtcgctgcaggctatgctctgtatggcagtgcaacgctggttgccctttcaacagggcaaggagtggactgctttatgtt
ggatccggctcttggtgaattcattttggtggaaaaagatgtgaaaatcaagaagaaaggaaaaatctatagtcttaatg
aaggttatgcaaagtattttgatcctgctgtgactgagtatttacaaaagaaaaaatttcctgaggaaggaatatctcct
tatggagccagatacgtaggctccatggtagctgatgttcaccgtaccctggtgtatggtgggatatttttatatccagc
taaccagaaaagtcccaaaggaaagctgcggctcttgtacgaatgcaaccccatcgcttttatcattgaacaggctggag
gaatagctactacaggcacagaggcggtgttggatgtaaagccagagtctattcatcagagagtccctttcattgtcggt
tctcccgaggatgttcaagaataccttgcatttgtacagaaacaccagaaaagcagctagtgcagtggtgggattcatcc
agttcgcatcagttcggcagaactggtagctaattttttattgcccaggcccagaatggacttccagaagtggcattcac
acagagaactggttgttcacatatttgaatcccaccactgagctagtggccctctaaagtgccccatctatttgcgtttg
cattatgctccgaaaaaatatgaagctgcaaagtgaaagaaatgtccaatctgatgatcacaataagaaaggcattgttc
ccctatattttttttaaaaaaatccttcctttaaataaaaatatcaagttgaacatttttaaagaaaaaacaagaataaa
acaaggatctttttgaatgaat

Protein
Protein IDhabu1_s4166_g13603.t1
Definition-
>habu1_s4166_g13603.t1
MSDQSPFETDMITLNRYVMEKGRRVKGATGELTQLLNSTLTAIKAISSAVRKAGLAHMYGIAGSMNVTGDEQKKLDVLSN
SLVINMLQSSYSTCVLVSEENKEAIITPKEKRGKYVVCFDPLDGSSNIDCLASIGTIFAIYKKTSEDEPSEKDALQPGRN
IVAAGYALYGSATLVALSTGQGVDCFMLDPALGEFILVEKDVKIKKKGKIYSLNEGYAKYFDPAVTEYLQKKKFPEEGIS
PYGARYVGSMVADVHRTLVYGGIFLYPANQKSPKGKLRLLYECNPIAFIIEQAGGIATTGTEAVLDVKPESIHQRVPFIV
GSPEDVQEYLAFVQKHQKSS

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