Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s4166_g13604
Locus habu1_scaffold4166 : 133331 ... 153195 : -
To GenomeBrowser habu1_scaffold4166:133331..153195
Genes list of scaffold habu1_scaffold4166

Annotation by Blast2GO
Annotation GO
fructose- -bisphosphatase 1 EC:3.1.3.11 GO:0006000 GO:0006013 GO:0006094 GO:0006096 GO:0006098 GO:0015976 GO:0016311 GO:0042132

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s4166_g13604.t1 1 1 FBPase 13 334 0.0 453.2 0.0 0.0 453.0
habu1_s4166_g13604.t1 1 1 Inositol_P 34 126 9.7e-06 25.0 3.0e-09 2.2e-05 23.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s4166_g13604.t1 gi|602660997|ref|XP_007436159.1| PREDICTED: fructose-1,6-bisphosphatase 1 [Python bivittatus] 0.0
habu1_s4166_g13604.t1 gi|637261262|ref|XP_003216500.2| PREDICTED: fructose-1,6-bisphosphatase 1 [Anolis carolinensis] 0.0
habu1_s4166_g13604.t1 gi|683933777|ref|XP_009096228.1| PREDICTED: fructose-1,6-bisphosphatase 1 [Serinus canaria] 0.0
habu1_s4166_g13604.t1 gi|727030315|ref|XP_010402032.1| PREDICTED: fructose-1,6-bisphosphatase 1 [Corvus cornix cornix] 0.0
habu1_s4166_g13604.t1 gi|706147341|ref|XP_010205522.1| PREDICTED: fructose-1,6-bisphosphatase 1 [Colius striatus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 12.3
Venom grand-1 160.6
Pit, infrared sensing 20.9
Nose 29.4
Brain-1 3.6
Eye 15.5
fetal fibroblast 24.2
venom gland-2 149.1
Brain-2 2.4
Spleen 36.2
Lung 25.5
Liver 2898.4
Kidney 381.6
Pancreas 142.3
Small intestine 20.3
Large intestine 35.9
Stomach 47.1
heart 2.6
ovary 10.6
cheek muscle 5.6

Transcript
Transcript IDhabu1_s4166_g13604.t1
Definition-
>habu1_s4166_g13604.t1
cccgaagaccaaaaactccacagcgattctcctgccctccctgctcggaatcgggcttccccacctctttctcaggattg
ggcggctggagggaggagacagcgctcctctccccctttagctgcccgcggagtgggcggctggcgccagttccgcgtag
taaaagaggtggacccgggaactgtcgggacggcctccgccgttgccaaccgggccctcccctctcaaaaggattcggat
cggccaccgcgtcctcctcttcttcctcctcctcctcctcctcctcgtccagcgccaaagccacagctgctgccaccatg
acagaccggtccaccttcgacaccaatgtgaccactgtgacccggttcgtgatggagggaggcaggaaagcgcggggcac
gggagagctcactcagctgctcaactcgctctgcacggccgtcaaagctatctccaccgccgtgcgcaaggcgggcattg
ccaacctctatggaattgctggttctaccaatgtgacaggggaccaagtaaagaagttagacgttctttccaatgacatg
gtgatcaacatgctgaaatcatcgttctcaacttgtatgattgtgtcagaagaaaacaaagaagcagtaatagtggaaga
tgatagacagggtaaatatattgtctgcgttgatccacttgatggctcttctaatattgattgccttgcttctattggaa
ccatttttggcatctatagaaaggtttcacctggtgctccttgtgaaaaggatgctctgcagcctggtcgcaatatggtg
gcagccggttatgccctctatggaagtgctaccatgcttgtcctggccctggaatctggtgtcaactgttttatgcttga
tccggcaatcggtgaattcattttggtcaatagggatgttaaaataaagaaaaagggaaatatctacagtctaaatgagg
gatatgcatcgtactttgatccagcagtcacggaatatcttcagaagaagaaatttccccaagacggtagctctccctat
ggcagtaggtatgtaggttccatggtggctgatgtgcatcgtactttggtgtatggaggaatctttttatacccagccaa
ttcaaagatccctaagggaaagctgagattgctgtatgagtgcaaccccatggctttcatcatcgaaaaagctggagggg
ctgcaacaacaggcaaggaggcgatcttggacattattcctgaaaacattcatgaacgtgcaccagttgtgctgggctct
tcagatgatgtggaggaatacttagccatggtcaagaagcattcagccaaatgaggaacagaagactgccaagatcccaa
gagaaacatcttgccaccggaccaagccgatatgtggtgtgctgtagcttcggaatgcctcaaaagttaatgcagtgtga
ttttccaagtgctattaaaaattttatctactcagtcccct

Protein
Protein IDhabu1_s4166_g13604.t1
Definition-
>habu1_s4166_g13604.t1
MTDRSTFDTNVTTVTRFVMEGGRKARGTGELTQLLNSLCTAVKAISTAVRKAGIANLYGIAGSTNVTGDQVKKLDVLSND
MVINMLKSSFSTCMIVSEENKEAVIVEDDRQGKYIVCVDPLDGSSNIDCLASIGTIFGIYRKVSPGAPCEKDALQPGRNM
VAAGYALYGSATMLVLALESGVNCFMLDPAIGEFILVNRDVKIKKKGNIYSLNEGYASYFDPAVTEYLQKKKFPQDGSSP
YGSRYVGSMVADVHRTLVYGGIFLYPANSKIPKGKLRLLYECNPMAFIIEKAGGAATTGKEAILDIIPENIHERAPVVLG
SSDDVEEYLAMVKKHSAK

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