Gene
| Gene Model ID | habu1_s4166_g13609 |
|---|---|
| Locus | habu1_scaffold4166 : 613600 ... 671207 : + |
| To GenomeBrowser | habu1_scaffold4166:613600..671207 |
| Genes list of scaffold | habu1_scaffold4166 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna excision repair protein ercc-6-like 2 | GO:0003676 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4166_g13609.t1 | 1 | 1 | SNF2_N | 87 | 420 | 0.0 | 184.7 | 0.0 | 0.0 | 184.7 |
| habu1_s4166_g13609.t1 | 1 | 1 | DEAD | 104 | 264 | 2.9e-08 | 33.4 | 2.3e-11 | 6.7e-08 | 32.2 |
| habu1_s4166_g13609.t1 | 1 | 1 | Helicase_C | 504 | 581 | 3.0e-18 | 65.4 | 4.5e-18 | 1.3e-14 | 53.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4166_g13609.t1 | gi|602667488|ref|XP_007439305.1| | PREDICTED: DNA excision repair protein ERCC-6-like 2-like, partial [Python bivittatus] | 0.0 |
| habu1_s4166_g13609.t1 | gi|641795869|ref|XP_008161388.1| | PREDICTED: DNA excision repair protein ERCC-6-like 2 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s4166_g13609.t1 | gi|637261220|ref|XP_008101420.1| | PREDICTED: DNA excision repair protein ERCC-6-like 2 [Anolis carolinensis] | 0.0 |
| habu1_s4166_g13609.t1 | gi|558190915|ref|XP_006129415.1| | PREDICTED: DNA excision repair protein ERCC-6-like 2-like isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s4166_g13609.t1 | gi|686583418|ref|XP_009271299.1| | PREDICTED: DNA excision repair protein ERCC-6-like 2 [Aptenodytes forsteri] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.1 |
| Venom grand-1 | 3.2 |
| Pit, infrared sensing | 4.4 |
| Nose | 3.1 |
| Brain-1 | 5.7 |
| Eye | 3.4 |
| fetal fibroblast | 6.1 |
| venom gland-2 | 5.0 |
| Brain-2 | 5.7 |
| Spleen | 6.1 |
| Lung | 3.9 |
| Liver | 4.5 |
| Kidney | 4.2 |
| Pancreas | 5.5 |
| Small intestine | 5.7 |
| Large intestine | 4.2 |
| Stomach | 4.9 |
| heart | 6.9 |
| ovary | 1.2 |
| cheek muscle | 8.7 |
Transcript
| Transcript ID | habu1_s4166_g13609.t1 |
|---|---|
| Definition | - |
>habu1_s4166_g13609.t1 gcgacgagatggtggtaggagagcggtgggcaagggtggtttggggcaataaagcgagcggcggtcacggaggttgggaa tggctttttctcaaactttaaagagatgttttagagcagaaacttccaccaggggaaagttatttcagaatattgatctt ttaaggcggagatcctggcagcatgagtttattacatgtatcttaaatgtcttgttttgcttctgacattttaagtaaac gtcttacaagtctatatgcataagtatatttgtatgtggaccctcgatgaagcatttggagatatattcctacatgtaat taggaatgtgtgacttttacagaccagtggcatgttggagatagatgtcttgcaccttttcctgaacttgggaagttttg agatgctacagtaatgtcttatgaaacaaatagcaatgggaagtgttttgccacagtttcccttgggaaaaatgaggaag agaaaatacttgcaaccaaattctcgcagatcaaaacaaataaaactacaaagaataatttaatattcgatgatgaagat ttggaaaagccttatttcccagaccgaagccttccgtcaccaacagtggcctttgagctgtccaacaatggggaagagat cccttataccattaatagatacctacgtgattatcaaagagaaggggcccagtttttccatggacattatgttcgtaaaa gtgggtgcattcttggagatgacatggggcttggaaaaacaatccaggttatttcatttctggctgcagtgctaaagaaa aagggaacacgtgcagatattgaaaataatatgcctgattttttgctacgtacgatgagaaaagaaatgtcatctgttcc aaagaaaattttcttgattgtggcacctctgtctgtgctctataattggaaacaagaattagatgtctgggggtatttca aggttatagttctgcatggcaacagaaaagagcatgagttaaatcgaatcaagcagggaaaatgtgaaattgtgctaaca acctctgaagcacttcgcctttatttgaatgagcttaacagtttacactggtcagctgtcattgtagatgaagtacatag aatcaagaatccaaaatctcagattactcagacaatgaaggctctaacgtgtaaagttcggttgggacttactgggacaa ttttacagaataacatgaaagagctttggtgtgttatggactgggctgttcctgggctcttgggtagcgaagcaagtttc aagacaaagatttctgatcctgtagaacttggccagcggcacactgcaactaagagagagctagccacaggtcgaaaggc aatggcaaggctagctcaaaaactatcaggctatttcttaaggcgtacaaaggctctcatcagtgaccagttgcccaaga aagaagacagaatggtatattgttatttgacagagttccagagaacaatttataagactgtattggagacagaagatgtg caactagttctgcgggcacgtgaaccatgtagctgtaatagtggccataaaaggaagaattgttgctacaaaacaaatgc tcatggtgaaacaatgaatgcgttatatttcagttatttgacagtccttcgtaagatagcaaatcatgctgccctgttac agacagagaacactagcaaacagcaggagacctacatcacaaggatctgcagccatgttttttccaaatttcctgatttt gtggaccttagcaaaaatgctgcttttgaaactctttctgatccaaaatatagtgggaaaatgaaagtccttcagaaact tttaaatcatttcagaaaaaacaaagataaagtgcttcttttttctttttcaacaaagttacttgacgttctggaacagt attgcatggcatctgggctagattacagaagactcgatggccatacaaaggcagaggacaggatcaaaatagtaaaagag ttcaacagcatggaagaagttaacatttgcctggtttctacaatggctggtggattgggtcttaattttgttggtgctaa tattgtcatactgtttgatccaacgtggaatccagctaatgatcttcaagccattgacagagtgtacagaattggccagc gtagggatgtgaaagtatttcggctaatttctttggggactgtggaagagatgatgtacttacgacagatttacaaacag caattgcattgtgtagcgattggaagtaaaaatgccaagcgatatttcaaggcagttcaaggatccagagagcatcaagg agaactttttgggattcgtaatcttttcaggcttcaagaccatggatcctgtcttacaaaagagattctagagagagaag gccaagtagaagctggtgtcatgacagctgctacgtggttgaaagagggatcccggcctcatgaggagacagagtgcgat tatgaagatcaagatacaaaaccgctagaaaaggaaggacttgagtcttacagtgacttcagtgatgaggagcatgagaa aaattctaaggtccaagcaataagaaagagaaattacaaagcaaaacatgccaaagttgcagagggacaactcagtttac tgcagtgtggatttcctaaacttctagaaaagaaaattagaacagctgaggatggcggatgcatcgggatgtctattgat gaaaatgcggatcacagatttatgagagggcaatccaaaggaaaggcccagattgacggttctgtgaaaactgagggcag gtacatttcaggatgtaagaaaaccttgctgtcaaaaatgagtatggagagacaagagaaacatggtgaaatagcgacta gggcttatcctgttttaccatgctctgaggaagaaaaggatcgatgtaaaaacatgtacaactcaaataaaggtggaata gttatggacattgaagacagctcatgtgaaagtgatactgtctctcctacccaatttcctaatggtcaggaatctattaa aagatttcaagagaaagacagaaacggtgatcttttagctgcagaaaaaatgcatttgcttacaccattgcaaaaacatt tgacttcagaggagagttatgcgagtgttctgcctttcagtaaaataaaaccatttgagaacatccgaaagataacaact aggaaagaagtaagtgatattagcgacgaatcggaagatattgagatgtccctttcaggaaagcagaaattaaccagtac tgcgaaacaaaaacgattccagagcaaggaaagaaataagtcttctaaaactgttgttcatagaagcagtccaagtagga aagaaagcaatgctgattctcagattatagaggaatattcatcagaagaagaacattttccagttaagacggttaaggct agtaaaaaaaaaccaacgctgaaggtcaataggagtggcattcaaattatgtccagattctcaccatatctcaattatcc ttctatggcattgagaacacacagtaattctagcagatggcagtcttctgtaagcaaagagtcgccctcaggccaaggac aaaaagtaggatcactggatggactttttgataatgtcgctgaagttccatatgttcattcaaaccaagatgtggttggc ccaagcaaagctgaaaataaaatgagtcattgggcagtccgagatgtttttgaactacaacaattttcccagctcccagc aaacatagcaatatgcagagccaagagaagcagaccgagtcccgaagacatttcatcaagaagaaaaaatgtgaagcggg atcatttaacaagtgaaaccagcaggcctcctctcctttatattacacatcctgtacgccagaagcagaaggaggttcac cggataggctcaattaccttcctggttggaaagacacctagaaaaatccgcaggaagcagtttgaggagatggccgatct ttttcataaagctcctgtggaagaatttgcgaagcacatcactcaaactacatcagaagaaaggcagaaaatgttaaaag aattttacagtgcaaaatatccagagttaaaagatgttttaaaagttgatgtcccagatcctgtttcaggaggaaatgga gaaggcagcaagtataaaagcaagttcaggaaaaaatcctccatttgtaaccatgggcaattgaagcctgatcttcctat aaatctgggagttccaggtagatctgatgctgaagaaaaacaacttcagtataagctttctgtacaggctcctgggggtc aaaacggggaagataaacaattgccagttgatattctcgaagacagcattaatgggagaaacagtcaggcatccaaagac tttatggcatctgagtcaccagccggtaaatcaagaataattgaggggctgtctgcatggagttctaaaggacagctgaa tttgaaggggacactgtcgcccaaaaaacgtcttatgtctgactcagaaagcagacaggctgaaatctgccagaaaaaag ctgttgcagacttgctaggagacacctccattttaaatgacctcttcaccagtaatgaaaatagtccagccgagataccc aggaggcctcttaatgggcctgccgaaaaagcagcaactcgacaaaaagatttctgggacatgctgaatgaagagaatga ggagtgtctccaaagactcacagatgtgacagccatagagaaactgtgtgaaagagcatctttcacttctttgttcaaag agaaagaagagagtgagaaatccctttggaaggaaaatgacaatttcttatggaaaatagataagaaacctgacacagat gatgaatttttttctggtatttaatgtggaatttaaatattgagggggaaaagatttttttttaaaaatccttgtgttac attttattcccataactgacttgatgcacttgattaatttaagttaaattaaacagcttaactcatttcaagctt |
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Protein
| Protein ID | habu1_s4166_g13609.t1 |
|---|---|
| Definition | - |
>habu1_s4166_g13609.t1 MSYETNSNGKCFATVSLGKNEEEKILATKFSQIKTNKTTKNNLIFDDEDLEKPYFPDRSLPSPTVAFELSNNGEEIPYTI NRYLRDYQREGAQFFHGHYVRKSGCILGDDMGLGKTIQVISFLAAVLKKKGTRADIENNMPDFLLRTMRKEMSSVPKKIF LIVAPLSVLYNWKQELDVWGYFKVIVLHGNRKEHELNRIKQGKCEIVLTTSEALRLYLNELNSLHWSAVIVDEVHRIKNP KSQITQTMKALTCKVRLGLTGTILQNNMKELWCVMDWAVPGLLGSEASFKTKISDPVELGQRHTATKRELATGRKAMARL AQKLSGYFLRRTKALISDQLPKKEDRMVYCYLTEFQRTIYKTVLETEDVQLVLRAREPCSCNSGHKRKNCCYKTNAHGET MNALYFSYLTVLRKIANHAALLQTENTSKQQETYITRICSHVFSKFPDFVDLSKNAAFETLSDPKYSGKMKVLQKLLNHF RKNKDKVLLFSFSTKLLDVLEQYCMASGLDYRRLDGHTKAEDRIKIVKEFNSMEEVNICLVSTMAGGLGLNFVGANIVIL FDPTWNPANDLQAIDRVYRIGQRRDVKVFRLISLGTVEEMMYLRQIYKQQLHCVAIGSKNAKRYFKAVQGSREHQGELFG IRNLFRLQDHGSCLTKEILEREGQVEAGVMTAATWLKEGSRPHEETECDYEDQDTKPLEKEGLESYSDFSDEEHEKNSKV QAIRKRNYKAKHAKVAEGQLSLLQCGFPKLLEKKIRTAEDGGCIGMSIDENADHRFMRGQSKGKAQIDGSVKTEGRYISG CKKTLLSKMSMERQEKHGEIATRAYPVLPCSEEEKDRCKNMYNSNKGGIVMDIEDSSCESDTVSPTQFPNGQESIKRFQE KDRNGDLLAAEKMHLLTPLQKHLTSEESYASVLPFSKIKPFENIRKITTRKEVSDISDESEDIEMSLSGKQKLTSTAKQK RFQSKERNKSSKTVVHRSSPSRKESNADSQIIEEYSSEEEHFPVKTVKASKKKPTLKVNRSGIQIMSRFSPYLNYPSMAL RTHSNSSRWQSSVSKESPSGQGQKVGSLDGLFDNVAEVPYVHSNQDVVGPSKAENKMSHWAVRDVFELQQFSQLPANIAI CRAKRSRPSPEDISSRRKNVKRDHLTSETSRPPLLYITHPVRQKQKEVHRIGSITFLVGKTPRKIRRKQFEEMADLFHKA PVEEFAKHITQTTSEERQKMLKEFYSAKYPELKDVLKVDVPDPVSGGNGEGSKYKSKFRKKSSICNHGQLKPDLPINLGV PGRSDAEEKQLQYKLSVQAPGGQNGEDKQLPVDILEDSINGRNSQASKDFMASESPAGKSRIIEGLSAWSSKGQLNLKGT LSPKKRLMSDSESRQAEICQKKAVADLLGDTSILNDLFTSNENSPAEIPRRPLNGPAEKAATRQKDFWDMLNEENEECLQ RLTDVTAIEKLCERASFTSLFKEKEESEKSLWKENDNFLWKIDKKPDTDDEFFSGI |
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