Gene
| Gene Model ID | habu1_s4166_g13611 |
|---|---|
| Locus | habu1_scaffold4166 : 764150 ... 781509 : - |
| To GenomeBrowser | habu1_scaffold4166:764150..781509 |
| Genes list of scaffold | habu1_scaffold4166 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| testosterone 17-beta-dehydrogenase 3 | GO:0016491 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4166_g13611.t1 | 1 | 1 | KR | 33 | 104 | 1.0e-05 | 25.2 | 1.9e-08 | 2.6e-05 | 23.9 |
| habu1_s4166_g13611.t1 | 1 | 1 | adh_short | 36 | 200 | 1.8e-22 | 79.9 | 1.7e-25 | 2.3e-22 | 79.6 |
| habu1_s4166_g13611.t1 | 1 | 1 | adh_short_C2 | 42 | 211 | 1.7e-08 | 34.5 | 1.5e-11 | 2.1e-08 | 34.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4166_g13611.t1 | gi|602667287|ref|XP_007439207.1| | PREDICTED: testosterone 17-beta-dehydrogenase 3, partial [Python bivittatus] | 0.0 |
| habu1_s4166_g13611.t1 | gi|591362366|ref|XP_007056092.1| | PREDICTED: testosterone 17-beta-dehydrogenase 3 [Chelonia mydas] | 0.0 |
| habu1_s4166_g13611.t1 | gi|327263381|ref|XP_003216498.1| | PREDICTED: testosterone 17-beta-dehydrogenase 3 [Anolis carolinensis] | 0.0 |
| habu1_s4166_g13611.t1 | gi|696983008|ref|XP_009559952.1| | PREDICTED: testosterone 17-beta-dehydrogenase 3 [Cuculus canorus] | 0.0 |
| habu1_s4166_g13611.t1 | gi|641795944|ref|XP_008161415.1| | PREDICTED: testosterone 17-beta-dehydrogenase 3, partial [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 0.6 |
| Pit, infrared sensing | 0.7 |
| Nose | 0.8 |
| Brain-1 | 0.1 |
| Eye | 0.0 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 0.4 |
| Lung | 15.9 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 0.0 |
| Small intestine | 0.2 |
| Large intestine | 0.4 |
| Stomach | 0.1 |
| heart | 0.3 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s4166_g13611.t1 |
|---|---|
| Definition | - |
>habu1_s4166_g13611.t1 accagaagtggtgccatagaaaatcccgccaaatgtgaagatgccaaaggagtactgctagtgaagttcatggagcgtgg tttgaccatcaatttcataactgtgaaacgttacgaaaactcagacgagccatccataacaagcatcagggcatgctgaa ctacagcaccctctgcgtgatttacagagtcagcatcttgcccccaacaatctgggtcctcattttacctcatcctcttc catcggaagggtggaaggtggtcactggagcaggaggtggaattggaagagcctactcgttggagcttgccaagcatgga ttaaatgtggttctcataagtcggtcactcaaaaacttggagaaggtagccttggaaattgaacaaacgactaagagaac tgtgaaaatcatacaagctgacttcacagaaaatgacatatatgaaaacattgaagaaaaccttcaaggattagaaattg gaattttagttaacaatgttggaatgctacctaatcgctttccgtgccattttcttaatattccagacaaagatgaagac ctcattaattgcaacatcatgtctgtcactaagatgacgcgaatcattttgaaacaaatggtggcaagaaaaaaaggtct aattcttaatctttcatcagcctttgggacctttccttgtcctttatatgcaatctattctgcatctaaggcttttgtat acacattttccaaagcacttcaagtggaatataagtcaaaaggaattgtgatacaggcagtgactccctttgctgtttct actccgatgatcatgcataaacagcctaatttgatcaccaaaacagcagaagagtttgcgcaagagtcactgagatatgt tacacttggtgatgaaacatttggatgtttagcccatgaaatcttggtaatccagttatgaatttgaattagattgcaaa aaatatagtgctttcctctagcagtgtttctcaaccttgccaacttgaagatatgtggacttcaaaactggctggggaat tcttggagttgaagtccacagctcttcaacttgacaaggttgagaaatgttattctggcaacagtttgtactgtgttagt ctactgtagctcaaaattaggagtctggtagcatttttttcaactaatgcattttattaaaaggcctaatgtgatgatga tgatcacatctgttgaagcaagttataactcatgcctgttaataaaaaaaaatgttaatctgaaaagc |
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Protein
| Protein ID | habu1_s4166_g13611.t1 |
|---|---|
| Definition | - |
>habu1_s4166_g13611.t1 MLNYSTLCVIYRVSILPPTIWVLILPHPLPSEGWKVVTGAGGGIGRAYSLELAKHGLNVVLISRSLKNLEKVALEIEQTT KRTVKIIQADFTENDIYENIEENLQGLEIGILVNNVGMLPNRFPCHFLNIPDKDEDLINCNIMSVTKMTRIILKQMVARK KGLILNLSSAFGTFPCPLYAIYSASKAFVYTFSKALQVEYKSKGIVIQAVTPFAVSTPMIMHKQPNLITKTAEEFAQESL RYVTLGDETFGCLAHEILVIQL |
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