Gene
| Gene Model ID | habu1_s4166_g13613 |
|---|---|
| Locus | habu1_scaffold4166 : 810071 ... 814649 : - |
| To GenomeBrowser | habu1_scaffold4166:810071..814649 |
| Genes list of scaffold | habu1_scaffold4166 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger protein 367 | GO:0003676 GO:0003700 GO:0005634 GO:0005667 GO:0006357 GO:0045449 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4166_g13613.t1 | 2 | 1 | zf-C2H2 | 153 | 174 | 2.6e-10 | 39.9 | 7.2e-08 | 0.00018 | 21.6 |
| habu1_s4166_g13613.t1 | 2 | 1 | zf-H2C2_2 | 166 | 192 | 1.7e-14 | 53.2 | 6.5e-11 | 1.6e-07 | 31.2 |
| habu1_s4166_g13613.t1 | 2 | 2 | zf-C2H2 | 182 | 204 | 2.6e-10 | 39.9 | 4.6e-07 | 0.0011 | 19.1 |
| habu1_s4166_g13613.t1 | 2 | 2 | zf-H2C2_2 | 197 | 223 | 1.7e-14 | 53.2 | 1.0e-07 | 0.00026 | 21.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4166_g13613.t1 | gi|637261212|ref|XP_008101418.1| | PREDICTED: zinc finger protein 367 [Anolis carolinensis] | 0.0 |
| habu1_s4166_g13613.t1 | gi|525027111|ref|XP_005060989.1| | PREDICTED: zinc finger protein 367 [Ficedula albicollis] | 0.0 |
| habu1_s4166_g13613.t1 | gi|363744478|ref|XP_003643057.1| | PREDICTED: zinc finger protein 367-like isoform X1 [Gallus gallus] | 0.0 |
| habu1_s4166_g13613.t1 | gi|733928062|ref|XP_010724937.1| | PREDICTED: zinc finger protein 367 [Meleagris gallopavo] | 0.0 |
| habu1_s4166_g13613.t1 | gi|530634863|ref|XP_005304334.1| | PREDICTED: zinc finger protein 367 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.5 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 2.0 |
| Nose | 1.6 |
| Brain-1 | 2.2 |
| Eye | 1.2 |
| fetal fibroblast | 5.1 |
| venom gland-2 | 0.6 |
| Brain-2 | 3.5 |
| Spleen | 0.8 |
| Lung | 0.7 |
| Liver | 0.4 |
| Kidney | 0.9 |
| Pancreas | 0.1 |
| Small intestine | 0.8 |
| Large intestine | 1.0 |
| Stomach | 0.6 |
| heart | 7.4 |
| ovary | 2.2 |
| cheek muscle | 4.8 |
Transcript
| Transcript ID | habu1_s4166_g13613.t1 |
|---|---|
| Definition | - |
>habu1_s4166_g13613.t1 aacgcgggaaagtctagggctcgggagcggtggtcggggttactgctgctgatggtgaggagccgcggttgcctcagaaa gccgggcagacactgcacggggttggcctctgcacgaaggagtcttcctatcatgcacacctgaggcggtccttttcggc caccaaaggaaaagccaagaaaaccatccgcggggtacaggaggtaacggcaaccgcggatcgagaagcaagaatctcgg accgacgcggcatgtctgagctgccgggccctccacctgtcatcttgtgttcgggaagctccccgaagcgcgtcttggtc tcggtcatcaaaaccaccccagtcaagccgtcactcgccagcagagaggatcccgcccgcatgcccgtgccgccgccgcc acccatccctaccagcccgggcttcagtgacttcatggtctacccatggcgctggggggaaaatgcgcacaacgtcaccc tcagtcctccgcccgccgcatctcagccgctccgcgagggaggaggcaacggcgacgggctccgaagtgcggtcgagcgc tccaccgccgacgacgacgaagcggggagccctgacagcggtactgggagcaacgggcacttgagggatgggattagaag aggtcgaccaagagcagagacagtccgagatctaataagtgagggagagcattcatctagcaggatacgttgtaatgtct gcaacagagttttcccaagagagaagtctttgcaggcacacaaaagaacacatactggtgaaagaccttatttgtgtgat tacccagagtgtgggaaagcttttgttcagagtgggcaacttaaaacacatcagcgtctccatacaggagagaagccttt tgtctgtgcagaaaatggatgtataagcagattcacacatgcaaaccgccattgccccaagcatccatatgcaaaattaa gacgagaagaacctacagacagactgaacaaaaagcaaactgcagacaacaaagctgttgctgaatggctgacaaagtat tgggaaatgagagaacaacgcactcctatattgaaaaataaatctattcataagcctgaccaggagcagcaagatcccat ggaatatcttcagtctgaggatgaggaagaagaggaaaaaaatactgctcattcatccctttgtagccgccttcaagaac agcgtgaacgcttacatggggcactggcactcattgagcttgccaacttggctggagccccactgcgacagtaatagaaa acctggagtgtggattaacaaaatgtactgaattttgttatttaaaccagttagcttctggcataagctaagcaccttat cggcttccataggctgctattatgtagaatttatgaagaatgttgttaccctaaaaaaatggggtaaaagaattgcactt tttatatggtaaagcttttaaagtattttgtaaataggagattatatgatgcagtatgtaacatgatcatcttacagaaa gctagatttgcaaggttagggtgcttttaatcacagttgcatggaagtaagtcactacaaccagtgaaatttgcttccat aaaaacggtgtttaaagttgggatg |
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Protein
| Protein ID | habu1_s4166_g13613.t1 |
|---|---|
| Definition | - |
>habu1_s4166_g13613.t1 MSELPGPPPVILCSGSSPKRVLVSVIKTTPVKPSLASREDPARMPVPPPPPIPTSPGFSDFMVYPWRWGENAHNVTLSPP PAASQPLREGGGNGDGLRSAVERSTADDDEAGSPDSGTGSNGHLRDGIRRGRPRAETVRDLISEGEHSSSRIRCNVCNRV FPREKSLQAHKRTHTGERPYLCDYPECGKAFVQSGQLKTHQRLHTGEKPFVCAENGCISRFTHANRHCPKHPYAKLRREE PTDRLNKKQTADNKAVAEWLTKYWEMREQRTPILKNKSIHKPDQEQQDPMEYLQSEDEEEEEKNTAHSSLCSRLQEQRER LHGALALIELANLAGAPLRQ |
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