Gene
| Gene Model ID | habu1_s4166_g13614 |
|---|---|
| Locus | habu1_scaffold4166 : 819370 ... 838394 : + |
| To GenomeBrowser | habu1_scaffold4166:819370..838394 |
| Genes list of scaffold | habu1_scaffold4166 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| intracellular hyaluronan-binding protein 4 | GO:0005737 GO:0043392 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4166_g13614.t3 | 1 | 1 | HABP4_PAI-RBP1 | 187 | 299 | 4.6e-30 | 104.2 | 3.1e-34 | 4.6e-30 | 104.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4166_g13614.t3 | gi|472376128|ref|XP_004407502.1| | PREDICTED: intracellular hyaluronan-binding protein 4 [Odobenus rosmarus divergens] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 19.3 |
| Venom grand-1 | 56.6 |
| Pit, infrared sensing | 33.9 |
| Nose | 18.5 |
| Brain-1 | 9.5 |
| Eye | 28.1 |
| fetal fibroblast | 18.5 |
| venom gland-2 | 32.1 |
| Brain-2 | 17.7 |
| Spleen | 17.9 |
| Lung | 20.3 |
| Liver | 18.3 |
| Kidney | 9.8 |
| Pancreas | 29.0 |
| Small intestine | 77.4 |
| Large intestine | 20.3 |
| Stomach | 22.3 |
| heart | 16.6 |
| ovary | 117.9 |
| cheek muscle | 50.6 |
Transcript
| Transcript ID | habu1_s4166_g13614.t1 |
|---|---|
| Definition | - |
>habu1_s4166_g13614.t1 gggcgggcgagtggtcatggcgtggttacttgggccgcgctgaagagggcttgcttctttctgtcgcattcgggaggggg tgggtgctgctgcggcggcggctgacggcaccgcgacaatgaaaggcgcgctggccagccccgtggccgccgccacaact atgcaggagagctttggctgtgccgtcgccaaccgcttccaccagctgctcgatgatgaatccgaccctttcgacatcct ccgcgaggcagagcagcgcaagcaacagagcaagaagcgcgaagaagcggctttttcagccggcagaaaacctggccccg gagctgccgtcgccgctgtcaaaagagaatcccagaaggagcgaaaaggctccccgttcttgcaatcggagagcccccca gcacccggtcaaaagcgagctccaaaaagaggagaacaacagggttggaatgaaaaccgtggtacggagataaaacagga taaagctgaatggaaacctttcaaagaatactgtcctcatgaaatggaaagacaagcagagtttacactagaaagaccga tagagcgttttgatcgggaaaggccaatgagaggccgtgggggaggaagaggtggactgcagggcagaggcagaggtggt ggtatgaacaggaccttcaatggctttgatcaaagagggaagcgggaatttgaccggcagagcgggagtgacaaaacagg agtccgtgcagaagataaaaggggtggaagtggaccacgtaactggggaactgctaaggatgatatgagtgagctggaac agactcctatggaagaaactgcagaaacagaagagagcccaggagcacctgatggagagcctccaaagaaaattgctgaa ggagagccagtggaagaagtagttcaagagatgacattggatgaatggaaaaatcttcaggaacagaatcgtccaaagcc cgaattcaacatccggaagcccgaaaccgctgttccttccaaagcagtggtaattcacaagtcaaaatatagagatgatg tgctgaaggaagattttgaggatgattctcacttttcccgaaaagcagcaaatgatatcacttctcaactggacattaac tttgggaatctgcctcgtcctggaagaggagccagaggggcacgaggaagtcgtgggcgtgtccgaagagttgacaactc atggccaaggccaggagtgatgatccatgttgctgctccaaacccagatgaccctgaggattttcctgctttgtcttgac acctccaaaaatagctgtggaaatattatgttgctgtagaagagaaccatccaagtctacagagagaaacgacttgtgtg tgtgtgaattttgcactactatatgttaagacatacccagtgggtttggaggcaagttccagtaactctggttttggatt agttgtatgaaggcttatggtatcatacatgaggaatttcaaataaaaattcaggatgatggtgtcaaacaggcacaggt ggatgagtttttgtcccttttattacaaatgtaaaccatattagatggtttggggacaacatgtttggactacttgtttt ccactttcactgagtaaagtgtgtgtttgccatacttaaattacaattttcagaagttgggaaatgctctcactggttga gatgaaggtgctatttttacatcttttttatcatttaatataaaaagctgcaaactagattttaaagttacaatttggaa attaaaatttgaagaatgaggcaagctgcaaataaatcctagaataaatagtgttttagaagaaagggtg |
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| Transcript ID | habu1_s4166_g13614.t2 |
| Definition | - |
>habu1_s4166_g13614.t2 tgaagagggcttgcttctttctgtcgcattcgggagggggtgggtgctgctgcggcggcggctgacggcaccgcgacaat gaaaggcgcgctggccagccccgtggccgccgccacaactatgcaggagagctttggctgtgccgtcgccaaccgcttcc accagctgctcgatgatgaatccgaccctttcgacatcctccgcgaggcagagcagcgcaagcaacagagcaagaagcgc gaagaagcggctttttcagccggcagaaaacctggccccggagctgccgtcgccgctgtcaaaagagaatcccagaagga gcgaaaaggctccccgttcttgcaatcggagagccccccagcacccggtcaaaagcgagctccaaaaagaggagaacaac agggttggaatgaaaaccgtggtacggagataaaacaggataaagctgaatggaaacctttcaaagaatactgtcctcat gaaatggaaagacaagcagagtttacactagaaagaccgatagagcgttttgatcgggaaaggccaatgagaggccgtgg gggaggaagaggtggactgcagggcagaggcagaggtggtggtatgaacaggaccttcaatggctttgatcaaagaggga agcgggaatttgaccggcagagcgggagtgacaaaacaggagtccgtgcagaagataaaaggggtggaagtggaccacgt aactggggaactgctaaggatgatatgagtgagctggaacagactcctatggaagaaactgcagaaacagaagagagccc aggagcacctgatggagagcctccaaagaaaattgctgaaggagagccagtggaagaagtagttcaagagatgacattgg atgaatggaaaaatcttcaggaacagaatcgtccaaagcccgaattcaacatccggaagcccgaaaccgctgttccttcc aaagcagtggtaattcacaagtcaaaatatagagatgatgtgctgaaggaagattttgaggatgattctcacttttcccg aaaagcagcaaatgatatcacttctcaactggacattaactttgggaatctgcctcgtcctggaagaggagccagagggg cacgaggaagtcgtgggcgtgtccgaagagttgacaactcatggccaaggccaggagtgatgatccatgttgctgctcca aacccagatgaccctgaggattttcctgctttgtcttgacacctccaaaaatagctgtggaaatattatgttgctgtaga agagaaccatccaagtctacagagagaaacgacttgtgtgtgtgtgaattttgcactactatatgttaagacatacccag tgggtttggaggcaagttccagtaactctggttttggattagttgtatgaaggcttatggtatcatacatgaggaatttc aaataaaaattcaggatgatggtgtcaaacaggcacaggtggatgagtttttgtcccttttattacaaatgtaaaccata ttagatggtttggggacaacatgtttggactacttgttttccactttcactgagtaaagtgtgtgtttgccatacttaaa ttacaattttcagaagttgggaaatgctctcactggttgagatgaaggtgctatttttacatcttttttatcatttaata taaaaagctgcaaactagattttaaagttacaatttggaaattaaaatttgaagaatgaggcaagctgcaaataaatcct agaataaatagtgttttagaagaaagggtg |
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| Transcript ID | habu1_s4166_g13614.t3 |
| Definition | - |
>habu1_s4166_g13614.t3 gggcgggcgagtggtcatggcgtggttacttgggccgcgctgaagagggcttgcttctttctgtcgcattcgggaggggg tgggtgctgctgcggcggcggctgacggcaccgcgacaatgaaaggcgcgctggccagccccgtggccgccgccacaact atgcaggagagctttggctgtgccgtcgccaaccgcttccaccagctgctcgatgatgaatccgaccctttcgacatcct ccgcgaggcagagcagcgcaagcaacagagcaagaagcgcgaagaagcggctttttcagccggcagaaaacctggccccg gagctgccgtcgccgctgtcaaaagagaatcccagaaggagcgaaaaggctccccgttcttgcaatcggagagcccccca gcacccggtcaaaagcgagctccaaaaagaggagaacaacagggttggaatgaaaaccgtggtacggagataaaacagga taaagctgaatggaaacctttcaaagaatactgtcctcatgaaatggaaagacaagcagagtttacactagaaagaccga tagagcgttttgatcgggaaaggccaatgagaggccgtgggggaggaagaggtggactgcagggcagaggcagaggtggt ggtatgaacaggaccttcaatggctttgatcaaagagggaagcgggaatttgaccggcagagcgggagtgacaaaacctt tgctttttgggggattctctccagaggagtccgtgcagaagataaaaggggtggaagtggaccacgtaactggggaactg ctaaggatgatatgagtgagctggaacagactcctatggaagaaactgcagaaacagaagagagcccaggagcacctgat ggagagcctccaaagaaaattgctgaaggagagccagtggaagaagtagttcaagagatgacattggatgaatggaaaaa tcttcaggaacagaatcgtccaaagcccgaattcaacatccggaagcccgaaaccgctgttccttccaaagcagtggtaa ttcacaagtcaaaatatagagatgatgtgctgaaggaagattttgaggatgattctcacttttcccgaaaagcagcaaat gatatcacttctcaactggacattaactttgggaatctgcctcgtcctggaagaggagccagaggggcacgaggaagtcg tgggcgtgtccgaagagttgacaactcatggccaaggccaggagtgatgatccatgttgctgctccaaacccagatgacc ctgaggattttcctgctttgtcttgacacctccaaaaatagctgtggaaatattatgttgctgtagaagagaaccatcca agtctacagagagaaacgacttgtgtgtgtgtgaattttgcactactatatgttaagacatacccagtgggtttggaggc aagttccagtaactctggttttggattagttgtatgaaggcttatggtatcatacatgaggaatttcaaataaaaattca ggatgatggtgtcaaacaggcacaggtggatgagtttttgtcccttttattacaaatgtaaaccatattagatggtttgg ggacaacatgtttggactacttgttttccactttcactgagtaaagtgtgtgtttgccatacttaaattacaattttcag aagttgggaaatgctctcactggttgagatgaaggtgctatttttacatcttttttatcatttaatataaaaagctgcaa actagattttaaagttacaatttggaaattaaaatttgaagaatgaggcaagctgcaaataaatcctagaataaatagtg ttttagaagaaagggtg |
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Protein
| Protein ID | habu1_s4166_g13614.t1 |
|---|---|
| Definition | - |
>habu1_s4166_g13614.t1 MKGALASPVAAATTMQESFGCAVANRFHQLLDDESDPFDILREAEQRKQQSKKREEAAFSAGRKPGPGAAVAAVKRESQK ERKGSPFLQSESPPAPGQKRAPKRGEQQGWNENRGTEIKQDKAEWKPFKEYCPHEMERQAEFTLERPIERFDRERPMRGR GGGRGGLQGRGRGGGMNRTFNGFDQRGKREFDRQSGSDKTGVRAEDKRGGSGPRNWGTAKDDMSELEQTPMEETAETEES PGAPDGEPPKKIAEGEPVEEVVQEMTLDEWKNLQEQNRPKPEFNIRKPETAVPSKAVVIHKSKYRDDVLKEDFEDDSHFS RKAANDITSQLDINFGNLPRPGRGARGARGSRGRVRRVDNSWPRPGVMIHVAAPNPDDPEDFPALS |
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| Protein ID | habu1_s4166_g13614.t2 |
| Definition | - |
>habu1_s4166_g13614.t2 MKGALASPVAAATTMQESFGCAVANRFHQLLDDESDPFDILREAEQRKQQSKKREEAAFSAGRKPGPGAAVAAVKRESQK ERKGSPFLQSESPPAPGQKRAPKRGEQQGWNENRGTEIKQDKAEWKPFKEYCPHEMERQAEFTLERPIERFDRERPMRGR GGGRGGLQGRGRGGGMNRTFNGFDQRGKREFDRQSGSDKTGVRAEDKRGGSGPRNWGTAKDDMSELEQTPMEETAETEES PGAPDGEPPKKIAEGEPVEEVVQEMTLDEWKNLQEQNRPKPEFNIRKPETAVPSKAVVIHKSKYRDDVLKEDFEDDSHFS RKAANDITSQLDINFGNLPRPGRGARGARGSRGRVRRVDNSWPRPGVMIHVAAPNPDDPEDFPALS |
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| Protein ID | habu1_s4166_g13614.t3 |
| Definition | - |
>habu1_s4166_g13614.t3 MKGALASPVAAATTMQESFGCAVANRFHQLLDDESDPFDILREAEQRKQQSKKREEAAFSAGRKPGPGAAVAAVKRESQK ERKGSPFLQSESPPAPGQKRAPKRGEQQGWNENRGTEIKQDKAEWKPFKEYCPHEMERQAEFTLERPIERFDRERPMRGR GGGRGGLQGRGRGGGMNRTFNGFDQRGKREFDRQSGSDKTFAFWGILSRGVRAEDKRGGSGPRNWGTAKDDMSELEQTPM EETAETEESPGAPDGEPPKKIAEGEPVEEVVQEMTLDEWKNLQEQNRPKPEFNIRKPETAVPSKAVVIHKSKYRDDVLKE DFEDDSHFSRKAANDITSQLDINFGNLPRPGRGARGARGSRGRVRRVDNSWPRPGVMIHVAAPNPDDPEDFPALS |
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