Gene
| Gene Model ID | habu1_s4166_g13616 |
|---|---|
| Locus | habu1_scaffold4166 : 909934 ... 917007 : - |
| To GenomeBrowser | habu1_scaffold4166:909934..917007 |
| Genes list of scaffold | habu1_scaffold4166 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4166_g13616.t2 | 1 | 1 | AhpC-TSA_2 | 78 | 190 | 5.2e-21 | 74.7 | 1.4e-24 | 6.9e-21 | 74.3 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.5 |
| Venom grand-1 | 6.2 |
| Pit, infrared sensing | 7.5 |
| Nose | 2.4 |
| Brain-1 | 3.0 |
| Eye | 3.6 |
| fetal fibroblast | 17.0 |
| venom gland-2 | 1.0 |
| Brain-2 | 1.7 |
| Spleen | 2.7 |
| Lung | 5.3 |
| Liver | 0.5 |
| Kidney | 4.5 |
| Pancreas | 1.8 |
| Small intestine | 1.5 |
| Large intestine | 3.0 |
| Stomach | 3.5 |
| heart | 15.2 |
| ovary | 3.0 |
| cheek muscle | 7.1 |
Transcript
| Transcript ID | habu1_s4166_g13616.t1 |
|---|---|
| Definition | - |
>habu1_s4166_g13616.t1 caacgggaaagaaagccactccctcggaatccgcacatccctcttggctctgttagccgggatcggtttgggttggggcg ttgcagcatgggagatccggtcacggagcaaatcgccgctcgaacggattggcagcgcgcccaggaagaccccgcggact tgcgagacgtcgcccagcgcttggtggaggacgcggcggggaacaggatccccttcggggctctttacaaggaacagaag acgatcgtgatcttcttaaggcattttttgtgctacatctgtaaagaatatgtggaagatctgggcaaaattcccaagaa atttttgcaagatgcaaatgttagacttatggttattgggcaatcagcacatcatcatattcggccattttgtaatctga caggttaccctcatgaaatatatgtagatccaggaagagaaatttataaaattcttggcatgaaaagaggggaaacctcc agctcagcagtgcacagccctcatgttaaatccagtttgctatcaggaagcattaaaagcatgtggagggcaatgacaag ccctgcatttgattttcagggtgatccagctcagcagggaggcactttcattttaggaccaggtgatgagattcactttg tgcaccttgaccaaaacaggttggaccatgtccccattaatactgttttgcagcttgctggagttgaaacagtagatttt aactacagatctgagattattgatatatgaatttttagaagaaaaatacatctgccgagacaagtaatatatgtcagccg accattgtggcaattcacccataatgaggttattgtgaaattaatacaatagaagtagctctagagtatatttttacaca tcaaaaatggcctttaaacttaatattgtgctcaagacacaataactcacttaacaagaaaacaagccattaaagctgct gcacagaaatactgattttatagagtctgtggatttatttaaatcacactattccacttaaaatttaactaatttgtgtt aatgatagaaacgtataggtaacaattagccagtctttttgcctcttcagtgtttgattaaaacaagacttcaaatcaaa acaaaaatgtaaattttaattgtttataattactttcttgaaagccaaagtaaagtgaatgttgttctgaagtctgtaaa atagagactgactgagaaaaaagtgcttagagattaatttcatggtagactactgattggatagtctttacttttagtct tgacaccccgttaatcttgaattaaaagttatctgtaaatttttctacagtattttgttaaggtacatgtaacagaataa tcagtgttacacccaattaaagtgtttcagatttgagttttca |
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| Transcript ID | habu1_s4166_g13616.t2 |
| Definition | - |
>habu1_s4166_g13616.t2 gatcggtttgggttggggcgttgcagcatgggagatccggtcacggagcaaatcgccgctcgaacggattggcagcgcgc ccaggaagaccccgcggacttgcgagacgtcgcccagcgcttggtggaggacgcggcggggaacaggatccccttcgggg ctctttacaaggaacagaagacgatcgtgatcttcttaaggcattttttgtgctacatctgtaaagaatatgtggaagat ctgggcaaaattcccaagaaatttttgcaagatgcaaatgttagacttatggttattgggcaatcagcacatcatcatat tcggccattttgtaatctgacaggttaccctcatgaaatatatgtagatccaggaagagaaatttataaaattcttggca tgaaaagaggggaaacctccagctcagcagtgcacagccctcatgttaaatccagtttgctatcaggaagcattaaaagc atgtggagggcaatgacaagccctgcatttgattttcagggtgatccagctcagcagggaggcactttcattttaggacc aggtgatgagattcactttgtgcaccttgaccaaaacaggttggaccatgtccccattaatactgttttgcagcttgctg gagttgaaacagtagattttaactacagatctgagattattgatatatgaatttttagaagaaaaatacatctgccgaga caagtaatatatgtcagccgaccattgtggcaattcacccataatgaggttattgtgaaattaatacaatagaagtagct ctagagtatatttttacacatcaaaaatggcctttaaacttaatattgtgctcaagacacaataactcacttaacaagaa aacaagccattaaagctgctgcacagaaatactgattttatagagtctgtggatttatttaaatcacactattccactta aaatttaactaatttgtgttaatgatagaaacgtataggtaacaattagccagtctttttgcctcttcagtgtttgatta aaacaagacttcaaatcaaaacaaaaatgtaaattttaattgtttataattactttcttgaaagccaaagtaaagtgaat gttgttctgaagtctgtaaaatagagactgactgagaaaaaagtgcttagagattaatttcatggtagactactgattgg atagtctttacttttagtcttgacaccccgttaatcttgaattaaaagttatctgtaaatttttctacagtattttgtta aggtacatgtaacagaataatcagtgttacacccaattaaagtgtttcagatttgagttttca |
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Protein
| Protein ID | habu1_s4166_g13616.t1 |
|---|---|
| Definition | - |
>habu1_s4166_g13616.t1 MGDPVTEQIAARTDWQRAQEDPADLRDVAQRLVEDAAGNRIPFGALYKEQKTIVIFLRHFLCYICKEYVEDLGKIPKKFL QDANVRLMVIGQSAHHHIRPFCNLTGYPHEIYVDPGREIYKILGMKRGETSSSAVHSPHVKSSLLSGSIKSMWRAMTSPA FDFQGDPAQQGGTFILGPGDEIHFVHLDQNRLDHVPINTVLQLAGVETVDFNYRSEIIDI |
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| Protein ID | habu1_s4166_g13616.t2 |
| Definition | - |
>habu1_s4166_g13616.t2 MGDPVTEQIAARTDWQRAQEDPADLRDVAQRLVEDAAGNRIPFGALYKEQKTIVIFLRHFLCYICKEYVEDLGKIPKKFL QDANVRLMVIGQSAHHHIRPFCNLTGYPHEIYVDPGREIYKILGMKRGETSSSAVHSPHVKSSLLSGSIKSMWRAMTSPA FDFQGDPAQQGGTFILGPGDEIHFVHLDQNRLDHVPINTVLQLAGVETVDFNYRSEIIDI |
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